Protein ID | Ophcf2|02771 |
Gene name | |
Location | scaffold_02:4717935..4719630 |
Strand | - |
Gene length (bp) | 1695 |
Transcript length (bp) | 1587 |
Coding sequence length (bp) | 1587 |
Protein length (aa) | 529 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01556 | DnaJ_C | DnaJ C terminal domain | 2.3E-34 | 215 | 438 |
PF00226 | DnaJ | DnaJ domain | 5.6E-24 | 68 | 129 |
PF00684 | DnaJ_CXXCXGXG | DnaJ central domain | 2.9E-09 | 240 | 303 |
GO Term | Description | Terminal node |
---|---|---|
GO:0051082 | unfolded protein binding | Yes |
GO:0031072 | heat shock protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
GO:0005515 | protein binding | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Mitochondrion | Mitochondrial transit peptide | 0.1335 | 0.0865 | 0.0485 | 0.0992 | 0.9393 | 0.1212 | 0.032 | 0.0495 | 0.0947 | 0.0068 |
Orthofinder run ID | 4 |
Orthogroup | 2680 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|02771 MNSSIFTKAVAPMRRLAQRRIVVRDYGCNGSGYHTAAFARPRCQGRRRVDAPLARRGFHATASQGIKDPYQTLGV YKQAAASEIKKAYYSLAKKYHPDTNKDPKAKDRFAEIQSAYEILSDPQKRKQYDQFGAAAFDPSAGGGGAGDSGG NPFAGGFAGFGGKGGFPFEDIFAAFTGGGGGAGGRRRRGGSSPFEAAFTSAFEQGDMLVGENIETFCNITFAEAA KGTTKTVTITPMTTCTTCSGHGLKSGSKKEACKNCNGTGTRLHFLHGGIQMAAECNSCEGIGSTIPKGSECSTCS GNGITRQRFSMPVNIPAGIEDGMRLKFEGEGDAPPLGRHANPNAAPHRGDLYVSIRVARDAKFVRDGPNLLHVTT IPFTTALLGGQISVPTLDGYVSIKVATGTNTGDRQVLAGMGMKRLNKKSAWGDLQIEFKVNMPKSLNSKQRTLLE FLADEMGDKSARRLVNVNRPMSTPADDADDHKREGWLKSIWHALTSSPAHETNNNHEPADGKKNAKDEPNKSSGS GSG* |
Coding | >Ophcf2|02771 ATGAACTCGAGTATATTCACAAAAGCCGTAGCGCCGATGCGGAGGCTGGCGCAGAGGCGGATTGTCGTCCGAGAT TACGGCTGTAATGGATCGGGTTATCACACGGCCGCCTTCGCACGACCAAGATGCCAGGGTAGGAGGAGGGTGGAT GCGCCGCTTGCTAGACGGGGTTTTCATGCGACGGCTTCGCAAGGGATCAAGGACCCTTACCAGACACTCGGTGTG TACAAGCAGGCTGCTGCTTCGGAGATCAAGAAGGCCTACTACAGTCTGGCGAAGAAATATCATCCAGATACGAAT AAGGATCCCAAGGCTAAGGATCGCTTCGCCGAGATCCAGTCGGCCTACGAGATCCTCTCAGATCCCCAGAAGCGG AAGCAGTATGATCAGTTCGGCGCTGCTGCTTTCGACCCCAGCGCAGGCGGTGGCGGCGCCGGTGACTCCGGGGGA AACCCCTTCGCCGGTGGCTTCGCCGGCTTCGGCGGAAAGGGCGGCTTTCCGTTCGAGGATATATTCGCCGCCTTC ACGGGTGGTGGTGGTGGGGCGGGAGGTCGACGACGACGAGGCGGTTCTTCACCCTTTGAAGCGGCGTTTACTTCC GCCTTTGAGCAGGGAGATATGCTCGTGGGTGAAAACATCGAGACGTTTTGCAACATCACCTTCGCCGAGGCGGCA AAGGGCACCACCAAGACGGTCACCATCACGCCCATGACGACGTGCACCACATGTTCCGGACACGGCCTCAAATCC GGCAGCAAGAAGGAGGCGTGCAAGAACTGCAACGGGACCGGCACCCGGCTGCACTTCCTGCACGGCGGCATCCAG ATGGCTGCAGAGTGCAACTCGTGCGAGGGCATCGGCTCTACCATCCCAAAGGGTTCAGAGTGTAGCACCTGCTCT GGCAACGGCATCACTCGTCAGAGGTTCTCGATGCCTGTGAACATCCCCGCTGGCATTGAGGACGGCATGCGGCTC AAGTTTGAAGGCGAGGGTGATGCGCCGCCTTTAGGTCGACATGCTAATCCTAACGCCGCCCCTCACCGTGGCGAC CTCTACGTCTCGATCCGCGTCGCCAGAGATGCCAAGTTCGTCCGCGATGGGCCCAATCTTTTGCACGTTACCACC ATCCCCTTCACAACTGCCCTCCTCGGCGGCCAGATCTCCGTCCCGACTCTCGACGGCTATGTAAGTATCAAGGTC GCGACCGGCACTAACACGGGCGATCGTCAGGTGCTGGCGGGCATGGGAATGAAGCGTCTCAACAAGAAGAGTGCA TGGGGTGACCTCCAGATCGAATTCAAAGTCAACATGCCCAAGTCGCTCAACTCTAAGCAGAGGACGCTCTTGGAG TTTCTGGCCGACGAGATGGGAGATAAGTCTGCCAGGAGGCTCGTCAACGTCAATCGTCCCATGAGCACGCCCGCC GACGACGCCGACGATCACAAGAGGGAGGGATGGCTCAAGAGCATCTGGCACGCTCTTACCAGCTCCCCAGCTCAC GAAACGAACAACAACCACGAGCCAGCCGACGGCAAGAAAAACGCCAAAGACGAGCCCAACAAGTCTTCCGGCTCG GGCTCCGGCTGA |
Transcript | >Ophcf2|02771 ATGAACTCGAGTATATTCACAAAAGCCGTAGCGCCGATGCGGAGGCTGGCGCAGAGGCGGATTGTCGTCCGAGAT TACGGCTGTAATGGATCGGGTTATCACACGGCCGCCTTCGCACGACCAAGATGCCAGGGTAGGAGGAGGGTGGAT GCGCCGCTTGCTAGACGGGGTTTTCATGCGACGGCTTCGCAAGGGATCAAGGACCCTTACCAGACACTCGGTGTG TACAAGCAGGCTGCTGCTTCGGAGATCAAGAAGGCCTACTACAGTCTGGCGAAGAAATATCATCCAGATACGAAT AAGGATCCCAAGGCTAAGGATCGCTTCGCCGAGATCCAGTCGGCCTACGAGATCCTCTCAGATCCCCAGAAGCGG AAGCAGTATGATCAGTTCGGCGCTGCTGCTTTCGACCCCAGCGCAGGCGGTGGCGGCGCCGGTGACTCCGGGGGA AACCCCTTCGCCGGTGGCTTCGCCGGCTTCGGCGGAAAGGGCGGCTTTCCGTTCGAGGATATATTCGCCGCCTTC ACGGGTGGTGGTGGTGGGGCGGGAGGTCGACGACGACGAGGCGGTTCTTCACCCTTTGAAGCGGCGTTTACTTCC GCCTTTGAGCAGGGAGATATGCTCGTGGGTGAAAACATCGAGACGTTTTGCAACATCACCTTCGCCGAGGCGGCA AAGGGCACCACCAAGACGGTCACCATCACGCCCATGACGACGTGCACCACATGTTCCGGACACGGCCTCAAATCC GGCAGCAAGAAGGAGGCGTGCAAGAACTGCAACGGGACCGGCACCCGGCTGCACTTCCTGCACGGCGGCATCCAG ATGGCTGCAGAGTGCAACTCGTGCGAGGGCATCGGCTCTACCATCCCAAAGGGTTCAGAGTGTAGCACCTGCTCT GGCAACGGCATCACTCGTCAGAGGTTCTCGATGCCTGTGAACATCCCCGCTGGCATTGAGGACGGCATGCGGCTC AAGTTTGAAGGCGAGGGTGATGCGCCGCCTTTAGGTCGACATGCTAATCCTAACGCCGCCCCTCACCGTGGCGAC CTCTACGTCTCGATCCGCGTCGCCAGAGATGCCAAGTTCGTCCGCGATGGGCCCAATCTTTTGCACGTTACCACC ATCCCCTTCACAACTGCCCTCCTCGGCGGCCAGATCTCCGTCCCGACTCTCGACGGCTATGTAAGTATCAAGGTC GCGACCGGCACTAACACGGGCGATCGTCAGGTGCTGGCGGGCATGGGAATGAAGCGTCTCAACAAGAAGAGTGCA TGGGGTGACCTCCAGATCGAATTCAAAGTCAACATGCCCAAGTCGCTCAACTCTAAGCAGAGGACGCTCTTGGAG TTTCTGGCCGACGAGATGGGAGATAAGTCTGCCAGGAGGCTCGTCAACGTCAATCGTCCCATGAGCACGCCCGCC GACGACGCCGACGATCACAAGAGGGAGGGATGGCTCAAGAGCATCTGGCACGCTCTTACCAGCTCCCCAGCTCAC GAAACGAACAACAACCACGAGCCAGCCGACGGCAAGAAAAACGCCAAAGACGAGCCCAACAAGTCTTCCGGCTCG GGCTCCGGCTGA |
Gene | >Ophcf2|02771 ATGAACTCGAGTATATTCACAAAAGCCGTAGCGCCGATGCGGAGGCTGGCGCAGAGGCGGATTGTCGTCCGAGAT TACGGCTGTAATGGATCGGGTTATCACACGGCCGCCTTCGCACGACCAAGATGCCAGGGTAGGAGGAGGGTGGAT GCGCCGCTTGCTAGACGGGTTAGTCTTCGATACGAGGCTGCTTCTTGTTTTACTTGGCTGACCCCTTTTCTCTAG GGTTTTCATGCGACGGCTTCGCAAGGGATCAAGGACCCTTACCAGACACTCGGTGTGTACAAGCAGGCTGCTGCT TCGGAGATCAAGAAGGCCTACTACAGTCTGGCGAAGAAATATCATCCAGATACGAATAAGGATCCCAAGGCTAAG GATCGCTTCGCCGAGATCCAGTCGGCCTACGAGATCCTCTCAGATCCCCAGAAGCGGAAGCAGTATGATCAGTTC GGCGCTGCTGCTTTCGACCCCAGCGCAGGCGGTGGCGGCGCCGGTGACTCCGGGGGAAACCCCTTCGCCGGTGGC TTCGCCGGCTTCGGCGGAAAGGGCGGCTTTCCGTTCGAGGATATATTCGCCGCCTTCACGGGTGGTGGTGGTGGG GCGGGAGGTCGACGACGACGAGGCGGTTCTTCACCCTTTGAAGCGGCGTTTACTTCCGCCTTTGAGCAGGGAGAT ATGCTCGTGGGTGAAAACATCGAGACGTTTTGCAACATCACCTTCGCCGAGGCGGCAAAGGGCACCACCAAGACG GTCACCATCACGCCCATGACGACGTGCACCACATGTTCCGGACACGGCCTCAAATCCGGCAGCAAGAAGGAGGCG TGCAAGAACTGCAACGGGACCGGCACCCGGCTGCACTTCCTGCACGGCGGCATCCAGATGGCTGCAGAGTGCAAC TCGTGCGAGGGCATCGGCTCTACCATCCCAAAGGGTTCAGAGTGTAGCACCTGCTCTGGCAACGGCATCACTCGT CAGAGGTTCTCGATGCCTGTGAACATCCCCGCTGGCATTGAGGACGGCATGCGGCTCAAGTTTGAAGGCGAGGGT GATGCGCCGCCTTTAGGTCGACATGCTAATCCTAACGCCGCCCCTCACCGTGGCGACCTCTACGTCTCGATCCGC GTCGCCAGAGATGCCAAGTTCGTCCGCGATGGGCCCAATCTTTTGCACGTTACCACCATCCCCTTCACAACTGCC CTCCTCGGCGGCCAGATCTCCGTCCCGACTCTCGACGGCTATGTAAGTATCAAGGTCGCGACCGGCACTAACACG GGCGATCGTCAGGTGCTGGCGGGCATGGGAATGAAGCGTCTCAACAAGAAGAGTGCATGGGGTGACCTCCAGATC GAATTCAAAGTCAACATGCCCAAGTCGCTCAACTCTAAGCAGAGGACGCTCTTGGAGTTTCTGGCCGACGAGATG GGAGATAAGTCTGCCAGGAGGCTCGTCAACGTCAATCGTCCCATGTGAGAAGCCCCGTCTCTGCCATATGTTATC CCATGCTTATCCTTGTTCAGGAGCACGCCCGCCGACGACGCCGACGATCACAAGAGGGAGGGATGGCTCAAGAGC ATCTGGCACGCTCTTACCAGCTCCCCAGCTCACGAAACGAACAACAACCACGAGCCAGCCGACGGCAAGAAAAAC GCCAAAGACGAGCCCAACAAGTCTTCCGGCTCGGGCTCCGGCTGA |