Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02744
Gene name
Locationscaffold_02:4590804..4591853
Strand-
Gene length (bp)1049
Transcript length (bp)816
Coding sequence length (bp)816
Protein length (aa) 272

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 74 96 22
2 126 148 22
3 160 182 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02744
MAVILARSIYITYCIRLGFGRHLHTLLEADVPETVRLTRHLVILEALSLWTWALPKLPVAILLYRIFGKFRRGLG
AILYSLVAVLIAIVVVQTVVTFVKCHPISKNWNPTVPGKCWNPDIYTDIGYFAGAYSAALDFGLAFFASTQVFSL
QMERSRKMLIAASLSLGIPAGVTTCIKLAMIASLNTSDITYSTVPLEVWNSVEGCALIVAACVPATRPVMRLLGK
RLGEWRSLLSGRRSHGSAKAEGTDHSSGVSSKDRVARPVELERGKH*
Coding >Ophcf2|02744
ATGGCAGTCATTCTCGCCCGATCCATCTACATCACATACTGCATACGCCTCGGATTCGGCCGCCATCTTCACACC
CTTCTCGAGGCAGACGTGCCTGAGACTGTCCGACTGACGCGGCACTTGGTCATCCTCGAGGCCCTCAGCCTATGG
ACCTGGGCCCTGCCCAAGCTGCCCGTCGCCATCCTGCTGTACCGCATCTTCGGAAAGTTCAGGAGAGGACTCGGC
GCCATTCTGTACTCGCTAGTGGCCGTCCTCATCGCCATCGTCGTCGTCCAGACGGTGGTGACCTTTGTCAAGTGC
CATCCCATCTCCAAGAACTGGAACCCGACCGTGCCGGGGAAATGCTGGAATCCAGACATTTACACCGACATCGGC
TACTTTGCCGGAGCCTACTCAGCAGCCCTCGACTTTGGCCTCGCCTTCTTTGCCTCAACCCAGGTGTTTAGTCTC
CAGATGGAAAGATCCCGCAAGATGCTGATAGCCGCGTCTCTGAGTCTCGGGATCCCCGCCGGCGTCACGACCTGC
ATCAAGCTCGCCATGATTGCCAGCCTCAACACGAGCGACATCACCTACTCGACCGTCCCACTGGAGGTCTGGAAC
AGCGTCGAAGGCTGCGCGCTCATCGTGGCAGCCTGCGTGCCAGCCACGCGTCCCGTCATGAGACTTCTCGGGAAG
CGCCTCGGCGAATGGCGCTCTCTCCTCAGCGGTCGCAGGAGCCACGGTTCTGCAAAGGCAGAGGGCACAGACCAC
AGCAGCGGCGTCTCCTCCAAAGACCGCGTTGCACGGCCTGTCGAGCTGGAGCGGGGGAAGCACTGA
Transcript >Ophcf2|02744
ATGGCAGTCATTCTCGCCCGATCCATCTACATCACATACTGCATACGCCTCGGATTCGGCCGCCATCTTCACACC
CTTCTCGAGGCAGACGTGCCTGAGACTGTCCGACTGACGCGGCACTTGGTCATCCTCGAGGCCCTCAGCCTATGG
ACCTGGGCCCTGCCCAAGCTGCCCGTCGCCATCCTGCTGTACCGCATCTTCGGAAAGTTCAGGAGAGGACTCGGC
GCCATTCTGTACTCGCTAGTGGCCGTCCTCATCGCCATCGTCGTCGTCCAGACGGTGGTGACCTTTGTCAAGTGC
CATCCCATCTCCAAGAACTGGAACCCGACCGTGCCGGGGAAATGCTGGAATCCAGACATTTACACCGACATCGGC
TACTTTGCCGGAGCCTACTCAGCAGCCCTCGACTTTGGCCTCGCCTTCTTTGCCTCAACCCAGGTGTTTAGTCTC
CAGATGGAAAGATCCCGCAAGATGCTGATAGCCGCGTCTCTGAGTCTCGGGATCCCCGCCGGCGTCACGACCTGC
ATCAAGCTCGCCATGATTGCCAGCCTCAACACGAGCGACATCACCTACTCGACCGTCCCACTGGAGGTCTGGAAC
AGCGTCGAAGGCTGCGCGCTCATCGTGGCAGCCTGCGTGCCAGCCACGCGTCCCGTCATGAGACTTCTCGGGAAG
CGCCTCGGCGAATGGCGCTCTCTCCTCAGCGGTCGCAGGAGCCACGGTTCTGCAAAGGCAGAGGGCACAGACCAC
AGCAGCGGCGTCTCCTCCAAAGACCGCGTTGCACGGCCTGTCGAGCTGGAGCGGGGGAAGCACTGA
Gene >Ophcf2|02744
ATGGTAAAGCCGGCGCCGAGACCTTTCAAGTCTTGTCAAATCGTCCCGTGCTGACGACAGTCGTTAGGCAGTCAT
TCTCGCCCGATCCATCTACATCACATACTGCATACGCCTCGGATTCGGCCGCCATCTTCACACCCTTCTCGAGGC
AGACGTGCCTGAGACTGTCCGACTGACGCGGCACTTGGTCATCCTCGAGGCCCTCAGCCTATGGACCTGGGCCCT
GCCCAAGCTGCCCGTCGCCATCCTGCTGTACCGCATCTTCGGAAAGTTCAGGAGAGGACTCGGCGCCATTCTGTA
CTCGCTAGTGGCCGTCCTCATCGCCATCGTCGTCGTCCAGACGGTGGTGACCTTTGTCAAGTGCCATCCCATCTC
CAAGAACTGGAACCCGACCGTGCCGGGGAAATGCTGGAATCCAGACATTTACACCGACATCGGCTACTTTGCCGG
AGGTAGACCCTCTCCTTCTCGCCGGGCTTTGCAACAGGCTGACGGACGTCGTAGCCTACTCAGCAGCCCTCGACT
TTGGCCTCGCCTTCTTTGCCTCAACCCAGGTGTTTAGTCTCCAGATGGAAAGATCCCGCAAGATGCTGATAGCCG
CGTCTCTGAGTCTCGGGATCCCGTGCGTCCCACAAAAACACGAAAAAAAAAAAAAAAGAATCACCCGACTGTAAA
CTGACGATTCAGCAGCGCCGGCGTCACGACCTGCATCAAGCTCGCCATGATTGCCAGCCTCAACACGAGCGACAT
CACCTGTGAGCTCTCCCCAAGCCGTCCGTCACACGACATGACTGACGCCCCCAGACTCGACCGTCCCACTGGAGG
TCTGGAACAGCGTCGAAGGCTGCGCGCTCATCGTGGCAGCCTGCGTGCCAGCCACGCGTCCCGTCATGAGACTTC
TCGGGAAGCGCCTCGGCGAATGGCGCTCTCTCCTCAGCGGTCGCAGGAGCCACGGTTCTGCAAAGGCAGAGGGCA
CAGACCACAGCAGCGGCGTCTCCTCCAAAGACCGCGTTGCACGGCCTGTCGAGCTGGAGCGGGGGAAGCACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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