Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02733
Gene name
Locationscaffold_02:4537335..4538278
Strand+
Gene length (bp)943
Transcript length (bp)870
Coding sequence length (bp)870
Protein length (aa) 290

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10173 Mit_KHE1 Mitochondrial K+-H+ exchange-related 8.9E-59 2 186

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

Domain # Start End Length
1 144 166 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02733
MRIFLLPVSTRRSLLYAQRLDSSPQSSTSSTSGNPPRRSLVDRGTAFAARTWTRWEKQPSGWQRRVVDYGNQALR
RIPFEEWGLKSVPPLSGRRREDEETGRVRVELVFPGGSFGPDEARALALRLATERLGLHRQRFFWCFAAMPLTLP
FALVPIIPNIPFFYLVYRAWSHWRAIAGGRHLQWLVETKLLHSAPSAKLSQLYASSPPLSRQPEGDREALLLTQK
QVRSFCEALDVPALEVELERAVSQVQKALDESRSGSGTQPEAGTVGSQESKTRNSSARRREENK*
Coding >Ophcf2|02733
ATGCGCATCTTTCTCCTCCCCGTGTCGACGCGACGCAGCCTCCTCTACGCCCAACGCCTCGACAGCTCCCCCCAA
AGCAGCACCAGCAGCACCAGCGGCAACCCTCCCCGCCGCAGCCTCGTCGATCGCGGTACCGCCTTCGCCGCCCGC
ACATGGACACGCTGGGAGAAACAGCCATCAGGCTGGCAGCGGCGCGTCGTCGACTACGGGAACCAGGCGCTGCGG
CGGATCCCATTCGAGGAATGGGGCCTCAAGTCTGTGCCGCCGCTGTCCGGGCGAAGACGAGAGGATGAAGAAACT
GGCAGGGTCCGCGTCGAGCTCGTCTTCCCGGGCGGTAGCTTTGGCCCAGATGAGGCTCGAGCCTTGGCCTTGAGG
CTAGCTACCGAGAGGCTTGGTCTGCATCGGCAGCGCTTCTTTTGGTGCTTTGCTGCTATGCCTCTCACTCTGCCC
TTTGCTCTCGTCCCCATCATCCCCAACATACCCTTCTTCTACCTCGTCTACCGCGCCTGGTCTCACTGGCGCGCC
ATCGCCGGCGGCCGCCATCTGCAATGGCTTGTCGAAACGAAACTCCTCCACTCAGCGCCCTCGGCCAAGCTGAGC
CAGCTCTATGCCAGCAGCCCACCCCTTTCCAGGCAACCAGAGGGGGACCGAGAAGCGCTGTTGTTGACGCAGAAG
CAGGTTCGCAGCTTCTGCGAAGCCCTCGACGTCCCGGCTCTAGAGGTAGAACTCGAGCGAGCCGTCTCCCAAGTT
CAAAAGGCCTTGGACGAGAGCCGCTCCGGGTCCGGCACACAGCCCGAGGCGGGAACAGTTGGCAGCCAAGAGTCA
AAGACGCGGAACTCGTCTGCACGGCGCCGGGAGGAGAACAAGTAG
Transcript >Ophcf2|02733
ATGCGCATCTTTCTCCTCCCCGTGTCGACGCGACGCAGCCTCCTCTACGCCCAACGCCTCGACAGCTCCCCCCAA
AGCAGCACCAGCAGCACCAGCGGCAACCCTCCCCGCCGCAGCCTCGTCGATCGCGGTACCGCCTTCGCCGCCCGC
ACATGGACACGCTGGGAGAAACAGCCATCAGGCTGGCAGCGGCGCGTCGTCGACTACGGGAACCAGGCGCTGCGG
CGGATCCCATTCGAGGAATGGGGCCTCAAGTCTGTGCCGCCGCTGTCCGGGCGAAGACGAGAGGATGAAGAAACT
GGCAGGGTCCGCGTCGAGCTCGTCTTCCCGGGCGGTAGCTTTGGCCCAGATGAGGCTCGAGCCTTGGCCTTGAGG
CTAGCTACCGAGAGGCTTGGTCTGCATCGGCAGCGCTTCTTTTGGTGCTTTGCTGCTATGCCTCTCACTCTGCCC
TTTGCTCTCGTCCCCATCATCCCCAACATACCCTTCTTCTACCTCGTCTACCGCGCCTGGTCTCACTGGCGCGCC
ATCGCCGGCGGCCGCCATCTGCAATGGCTTGTCGAAACGAAACTCCTCCACTCAGCGCCCTCGGCCAAGCTGAGC
CAGCTCTATGCCAGCAGCCCACCCCTTTCCAGGCAACCAGAGGGGGACCGAGAAGCGCTGTTGTTGACGCAGAAG
CAGGTTCGCAGCTTCTGCGAAGCCCTCGACGTCCCGGCTCTAGAGGTAGAACTCGAGCGAGCCGTCTCCCAAGTT
CAAAAGGCCTTGGACGAGAGCCGCTCCGGGTCCGGCACACAGCCCGAGGCGGGAACAGTTGGCAGCCAAGAGTCA
AAGACGCGGAACTCGTCTGCACGGCGCCGGGAGGAGAACAAGTAG
Gene >Ophcf2|02733
ATGCGCATCTTTCTCCTCCCCGTGTCGACGCGACGCAGCCTCCTCTACGCCCAACGCCTCGACAGCTCCCCCCAA
AGCAGCACCAGCAGCACCAGCGGCAACCCTCCCCGCCGCAGCCTCGTCGATCGCGGTACCGCCTTCGCCGCCCGC
ACATGGACACGCTGGGAGAAACAGCCATCAGGCTGGCAGCGGCGCGTCGTCGACTACGGGAACCAGGCGCTGCGG
CGGATCCCATTCGAGGAATGGGGCCTCAAGTCTGTGCCGCCGCTGTCCGGGCGAAGACGAGAGGATGAAGAAACT
GGCAGGGTCCGCGTCGAGCTCGTCTTCCCGGGCGGTAGCTTTGGCCCAGATGAGGCTCGAGCCTTGGCCTTGAGG
CTAGCTACCGAGAGGCTTGGTCTGCATCGGCAGCGCTTCTTTTGGTGCTTTGCTGCTATGCCTCTCACTCTGCCC
TTTGCTCTCGTCCCCATGTGCGGAACCTCACTCCCCTCCTTTTTCCTCTTCCCCGACTTTCATGAAATGCTGACT
CGTCTTCCCGCATAGCATCCCCAACATACCCTTCTTCTACCTCGTCTACCGCGCCTGGTCTCACTGGCGCGCCAT
CGCCGGCGGCCGCCATCTGCAATGGCTTGTCGAAACGAAACTCCTCCACTCAGCGCCCTCGGCCAAGCTGAGCCA
GCTCTATGCCAGCAGCCCACCCCTTTCCAGGCAACCAGAGGGGGACCGAGAAGCGCTGTTGTTGACGCAGAAGCA
GGTTCGCAGCTTCTGCGAAGCCCTCGACGTCCCGGCTCTAGAGGTAGAACTCGAGCGAGCCGTCTCCCAAGTTCA
AAAGGCCTTGGACGAGAGCCGCTCCGGGTCCGGCACACAGCCCGAGGCGGGAACAGTTGGCAGCCAAGAGTCAAA
GACGCGGAACTCGTCTGCACGGCGCCGGGAGGAGAACAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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