Protein ID | Ophcf2|02729 |
Gene name | |
Location | scaffold_02:4520120..4522416 |
Strand | - |
Gene length (bp) | 2296 |
Transcript length (bp) | 1152 |
Coding sequence length (bp) | 1152 |
Protein length (aa) | 384 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07690 | MFS_1 | Major Facilitator Superfamily | 8.3E-19 | 14 | 371 |
GO Term | Description | Terminal node |
---|---|---|
GO:0022857 | transmembrane transporter activity | Yes |
GO:0055085 | transmembrane transport | Yes |
GO:0051179 | localization | No |
GO:0008150 | biological_process | No |
GO:0006810 | transport | No |
GO:0009987 | cellular process | No |
GO:0003674 | molecular_function | No |
GO:0005215 | transporter activity | No |
GO:0051234 | establishment of localization | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cell membrane | Signal peptide|Transmembrane domain | 0.0672 | 0.0547 | 0.3348 | 0.6131 | 0.2502 | 0.0153 | 0.4056 | 0.5431 | 0.3615 | 0.052 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 30 | 52 | 22 |
2 | 59 | 78 | 19 |
3 | 135 | 157 | 22 |
4 | 225 | 247 | 22 |
5 | 267 | 289 | 22 |
6 | 309 | 331 | 22 |
7 | 341 | 363 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 21 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|02729 MTMAVYTALGVQPIFWNQMLRDIRVSQLDLTNGGTVKLGGTAVGCIVFIPFAKKYGRRSAYIFSTALVAAGVWWS AYMKTTAEVYLTNFVIGLAGAVNQAAVQMSRGTANGIYFIASKTGASLAPMMAGAHAAKAGYRTSYVSLAVCLTL ITLLFVGTLEETKFVSRDGDGDGKRVGLAETASASEIDRIVAPLRAPFPRYLRLELITETKESLLSIFREPLQTW WWPHVLFASVVYGMGICWFVVVGTVTAIRFVKEPYGFDSAQVGYMFGASAVGSVLGCLYGGFLTDKSIQWLARRN GGVFEPEMRFYLLPLPAVTLSVGLVIFGATTDQGAHWFFPALGIVIFSFGFGATADIVCTVVIDSYPDRLAAKDV PKPPETLR* |
Coding | >Ophcf2|02729 ATGACAATGGCCGTCTACACGGCACTCGGCGTCCAGCCCATCTTCTGGAACCAGATGCTTAGAGACATACGCGTC AGCCAACTTGATCTCACAAACGGGGGGACGGTCAAGTTGGGCGGCACGGCTGTAGGATGCATCGTCTTCATCCCC TTTGCCAAGAAATACGGTCGACGGTCCGCGTACATCTTCTCGACGGCTCTGGTGGCCGCTGGCGTCTGGTGGTCT GCCTATATGAAGACAACGGCCGAGGTCTATCTAACAAACTTCGTCATCGGTCTGGCCGGAGCGGTCAACCAGGCT GCTGTGCAGATGAGTAGAGGCACGGCAAACGGCATCTACTTCATAGCCAGCAAGACGGGAGCCTCGCTCGCGCCC ATGATGGCCGGAGCCCATGCTGCCAAGGCTGGATATAGGACGAGTTACGTCTCGCTGGCCGTTTGCCTCACGCTC ATCACCTTGCTCTTCGTCGGGACGTTGGAGGAGACGAAATTCGTGTCTCGAGATGGGGATGGTGATGGGAAGAGG GTTGGATTGGCTGAGACGGCTTCGGCTTCCGAGATTGATCGCATCGTGGCACCTCTACGAGCACCTTTCCCTCGT TATCTTCGTCTCGAGCTCATCACCGAGACGAAAGAGTCCCTACTAAGCATCTTCCGCGAGCCGCTCCAGACGTGG TGGTGGCCACACGTGCTCTTCGCGTCCGTCGTCTACGGCATGGGAATCTGCTGGTTTGTCGTCGTCGGGACCGTG ACAGCCATCCGGTTCGTGAAGGAGCCGTACGGCTTCGACTCGGCGCAGGTGGGATACATGTTTGGAGCGAGCGCC GTCGGCTCCGTCCTTGGCTGTCTTTACGGCGGTTTCCTCACTGACAAGAGTATTCAGTGGCTGGCTAGACGCAAC GGGGGCGTGTTTGAGCCTGAGATGCGCTTCTATCTTTTGCCGTTGCCTGCTGTTACCTTGTCTGTTGGGCTGGTC ATCTTTGGGGCCACGACGGACCAGGGGGCTCACTGGTTCTTCCCTGCTTTGGGAATCGTCATCTTCTCCTTTGGC TTCGGCGCAACGGCAGATATCGTCTGCACCGTCGTCATCGACTCGTATCCTGACCGCCTTGCCGCAAAGGATGTG CCGAAGCCACCCGAAACATTGCGCTGA |
Transcript | >Ophcf2|02729 ATGACAATGGCCGTCTACACGGCACTCGGCGTCCAGCCCATCTTCTGGAACCAGATGCTTAGAGACATACGCGTC AGCCAACTTGATCTCACAAACGGGGGGACGGTCAAGTTGGGCGGCACGGCTGTAGGATGCATCGTCTTCATCCCC TTTGCCAAGAAATACGGTCGACGGTCCGCGTACATCTTCTCGACGGCTCTGGTGGCCGCTGGCGTCTGGTGGTCT GCCTATATGAAGACAACGGCCGAGGTCTATCTAACAAACTTCGTCATCGGTCTGGCCGGAGCGGTCAACCAGGCT GCTGTGCAGATGAGTAGAGGCACGGCAAACGGCATCTACTTCATAGCCAGCAAGACGGGAGCCTCGCTCGCGCCC ATGATGGCCGGAGCCCATGCTGCCAAGGCTGGATATAGGACGAGTTACGTCTCGCTGGCCGTTTGCCTCACGCTC ATCACCTTGCTCTTCGTCGGGACGTTGGAGGAGACGAAATTCGTGTCTCGAGATGGGGATGGTGATGGGAAGAGG GTTGGATTGGCTGAGACGGCTTCGGCTTCCGAGATTGATCGCATCGTGGCACCTCTACGAGCACCTTTCCCTCGT TATCTTCGTCTCGAGCTCATCACCGAGACGAAAGAGTCCCTACTAAGCATCTTCCGCGAGCCGCTCCAGACGTGG TGGTGGCCACACGTGCTCTTCGCGTCCGTCGTCTACGGCATGGGAATCTGCTGGTTTGTCGTCGTCGGGACCGTG ACAGCCATCCGGTTCGTGAAGGAGCCGTACGGCTTCGACTCGGCGCAGGTGGGATACATGTTTGGAGCGAGCGCC GTCGGCTCCGTCCTTGGCTGTCTTTACGGCGGTTTCCTCACTGACAAGAGTATTCAGTGGCTGGCTAGACGCAAC GGGGGCGTGTTTGAGCCTGAGATGCGCTTCTATCTTTTGCCGTTGCCTGCTGTTACCTTGTCTGTTGGGCTGGTC ATCTTTGGGGCCACGACGGACCAGGGGGCTCACTGGTTCTTCCCTGCTTTGGGAATCGTCATCTTCTCCTTTGGC TTCGGCGCAACGGCAGATATCGTCTGCACCGTCGTCATCGACTCGTATCCTGACCGCCTTGCCGCAAAGGATGTG CCGAAGCCACCCGAAACATTGCGCTGA |
Gene | >Ophcf2|02729 ATGACAATGGCCGTCTACACGGCGTAGGCAAGATAACCCCCCCCCGATTCAATCTCAAGCTGACAGACAGCTCAA GACTCGGCGTCCAGCCCATCTTCTGGAACCAGATGCTTAGAGACATACGCGTCAGCCAACTTGATCTCACAAACG GGGGGACGGTCAAGTTGGGCGGCACGGCTGTAGGATGCATCGTCTTCATCCCCTTTGCCAAGAAATACGGTCGAC GGTCCGCGTACATCTTCTCGACGGCTCTGGTGGCCGCTGGCGTCTGGTGGTCTGCCTATATGAAGACAACGGCCG AGGTCTATCTAACAAACTTCGTCATCGGTCTGGCCGGAGCGGTCAACCAGGCTGCTGTGCAGATGAGTGTATGTC TCGATACCCCCTTAGAAGGCCATCTAACCGGCAAAGACGCGAGACATGTTCTTCGTTCACCAGAGAGGCACGGCA AACGGCATCTACTTCATAGCCAGCAAGACGGGAGCCTCGCTCGCGCCCATGATGGCCGGAGCCCATGCTGCCAAG GCTGGATATAGGACGAGTTACGTCTCGCTGGCCGTTTGCCTCACGCTCATCACCTTGCTCTTCGTCGGGACGTTG GAGGAGACGAAATTCGTGTCTCGAGATGGGGATGGTGATGGGAAGAGGGTTGGATTGGCTGAGACGGCTTCGGCT TCCGAGATTGATCGCATCGTGGCACCTCTACGAGCACCTTTCCCTCGTTATCTTCGTCTCGAGCTCATCACCGAG ACGAAAGAGTCCCTACTAAGCATCTTCCGCGAGCCGCTCCAGACGTGGTGGTGGCCACACGTGCTCTTCGCGTCC GTCGTCTACGGCATGGGAATCTGCTGGTTTGTCGTCGTCGGGACCGTGACAGCCATCCGGTTCGTGAAGGAGCCG TACGGCTTCGACTCGGCGCAGGTGGGATACATGTTTGGAGCGAGCGCCGTCGGCTCCGTCCTTGGCTGTCTTTAC GGCGGTTTCCTCACTGACAAGAGTATTCAGTGGCTGGCTAGACGCAACGGGGGCGTGTTTGAGCCTGAGATGCGC TTCTATCTTTTGCCGTTGCCTGCTGTTACCTTGTCTGTTGGGCTGGTCATCTTTGGGGCCACGACGGACCAGGTA TGCCGTTCTCTCTTAGGGATTCCGGCTGTTGCTGATGATGAGAAATAGGGGGCTCACTGGTTCTTCCCTGCTTTG GGAATCGTCATCTTCTCCTTTGGCTTCGGCGCAACGGCAGATATCGTCTGCACCGTCGTCATCGACTCGTATCCT GACGTGAGTTTCCATGTCCCATTTCGATAACATCAACATACGGGTTCTAACTGAAAAGCTGAAGCTTGTTGCTCA AACTTTCATGGCCGTCGCTTTCTGCCGCAACGCCCTCAGCATGATTGGGCCCGTGTCGATAAGCGGATGGATGGA AGTGATGAGTATCACAAACATCTTTGTCGTGGCTGCTTTGGTCAGCTTGGCTATTAATTCGACGGGCATTCCGCT TGTCATCTGGGGGAAGAGGTCGAGGGCTGCCATTGCTCCTAGATACTATAAGCTGGTGGGAGTAGATGTCAGTTC GTCGGAAATGTCGTCGCGATAAACTCGAGACATGATTGTCAAGAACAGCTGCCAGCATCTACATGTATCCGCCGG TGAAACATCCGTGTTCAGAGCATCAGCGTGCACACGTGTAGGACAGTAACGCGCCGAGACAAGACGATGGCTGAT GTAGTGCCGCTCGAGTTGCTGGTTGATGCTTTGAGCGTGCTGAGGATGGCTACGTGTGTTATTCCCACAACGGTC GTCTTCTACGTGACAGTCGTGAGTTACTCAGAATATACATACCTACCTTTCGGATGGTTCTCCCTTGTAAACTCG TGTACATCTACAGTGACTTGAGCCCACACGTAGTGTATGTAGTCTCCGCTGTCCTTGACTGCCTCATATAAGGAG CTAGGTTAGTCTACCTCAATGATGGAAGGGATGAGTGCGTCACACATGGTCATCAACTATGTTGTTAAAGTGGTA ACCTGCCTGCAAACTTGGATATACTAGACTACTACAACAAACACCATAGAGTAGTGTAGCTGACTGGCATGGAAA CTTGACAGAATCGAGGACGCTATCGAGGGCATACGGCAACTATCGAAACTACATGTACGAATAGACAAGCCCATT AACCGTGACAAGGGTCGTGCAATTGATCAGAGTGCAACCGATAACACACGGTGTCTCGGACGTGCTGGAACAGCG CCTTGCCGCAAAGGATGTGCCGAAGCCACCCGAAACATTGCGCTGA |