Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02723
Gene name
Locationscaffold_02:4505893..4506893
Strand-
Gene length (bp)1000
Transcript length (bp)762
Coding sequence length (bp)762
Protein length (aa) 254

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06912 DUF1275 Protein of unknown function (DUF1275) 1.5E-48 41 248

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.5

Transmembrane Domains

Domain # Start End Length
1 32 51 19
2 58 80 22
3 90 107 17
4 120 142 22
5 152 171 19
6 214 236 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02723
MAGTNSVPAGEALPLLGRPKPRTTTTWLANDVSRSWADVVLLLCYVVTGLLDSASTQVWGAFVSMQTGNTVYVGL
GLASLVSPPASPRLYRSGVSLISFCIGSFLFARFHRRFSPRRRWVLCVSFAVQAVLIVAAALIISMAPPARDDAV
DWTVLLPLALVAFQSCGQAVASRALRHNALTSVVLTSIYCDLFSDQDLFARANVERNRRAAAPLLLLLGAVAGGL
LAHSSLGISGALWCAAAVKLSTLIGTCP*
Coding >Ophcf2|02723
ATGGCCGGCACCAACTCTGTTCCAGCAGGAGAAGCCTTGCCACTCCTTGGCCGGCCGAAGCCTCGTACGACTACG
ACATGGCTCGCAAACGACGTCTCACGCTCTTGGGCAGACGTCGTCTTGCTACTCTGCTACGTCGTCACTGGCCTG
CTTGACAGTGCATCGACGCAGGTCTGGGGCGCTTTCGTCTCCATGCAGACCGGAAACACCGTCTACGTCGGTCTA
GGCCTCGCCTCGCTCGTCTCGCCGCCAGCCTCACCACGTCTCTACCGCTCGGGCGTCTCACTCATCTCGTTCTGT
ATCGGGTCTTTTCTCTTCGCCCGCTTTCATCGCCGCTTCTCTCCACGTCGCCGCTGGGTGCTCTGCGTCTCCTTC
GCCGTCCAGGCTGTCCTCATCGTTGCCGCCGCTCTCATCATATCCATGGCGCCGCCGGCCCGTGACGATGCCGTC
GACTGGACCGTTTTGCTGCCTCTCGCTCTCGTCGCGTTTCAGAGTTGCGGCCAGGCAGTGGCCAGCCGCGCGCTC
CGTCATAATGCTCTGACTAGCGTCGTCCTCACCAGCATCTACTGCGACCTCTTCTCCGACCAGGACCTCTTTGCC
CGTGCCAACGTCGAGCGCAACCGACGCGCTGCCGCTCCTCTACTACTGCTTCTTGGTGCCGTCGCCGGAGGCCTC
TTGGCTCATAGCTCCTTGGGTATCAGCGGTGCCCTGTGGTGCGCTGCCGCCGTCAAGCTCTCCACTCTTATCGGG
ACCTGCCCCTAG
Transcript >Ophcf2|02723
ATGGCCGGCACCAACTCTGTTCCAGCAGGAGAAGCCTTGCCACTCCTTGGCCGGCCGAAGCCTCGTACGACTACG
ACATGGCTCGCAAACGACGTCTCACGCTCTTGGGCAGACGTCGTCTTGCTACTCTGCTACGTCGTCACTGGCCTG
CTTGACAGTGCATCGACGCAGGTCTGGGGCGCTTTCGTCTCCATGCAGACCGGAAACACCGTCTACGTCGGTCTA
GGCCTCGCCTCGCTCGTCTCGCCGCCAGCCTCACCACGTCTCTACCGCTCGGGCGTCTCACTCATCTCGTTCTGT
ATCGGGTCTTTTCTCTTCGCCCGCTTTCATCGCCGCTTCTCTCCACGTCGCCGCTGGGTGCTCTGCGTCTCCTTC
GCCGTCCAGGCTGTCCTCATCGTTGCCGCCGCTCTCATCATATCCATGGCGCCGCCGGCCCGTGACGATGCCGTC
GACTGGACCGTTTTGCTGCCTCTCGCTCTCGTCGCGTTTCAGAGTTGCGGCCAGGCAGTGGCCAGCCGCGCGCTC
CGTCATAATGCTCTGACTAGCGTCGTCCTCACCAGCATCTACTGCGACCTCTTCTCCGACCAGGACCTCTTTGCC
CGTGCCAACGTCGAGCGCAACCGACGCGCTGCCGCTCCTCTACTACTGCTTCTTGGTGCCGTCGCCGGAGGCCTC
TTGGCTCATAGCTCCTTGGGTATCAGCGGTGCCCTGTGGTGCGCTGCCGCCGTCAAGCTCTCCACTCTTATCGGG
ACCTGCCCCTAG
Gene >Ophcf2|02723
ATGGCCGGCACCAACTCTGTTCCAGCAGGAGAAGCCTTGCCACTCCTTGGCCGGCCGAAGCCTCGTACGACTACG
ACATGGCTCGCAAACGACGTCTCACGCTCTTGGGCAGACGTCGTCTTGCTACTCTGCTACGTCGTCACTGGCCTG
CTTGACAGTGCATCGACGCAGGTCTGGGGCGCTTTCGTCTCCATGCAGACCGGTGCGTCGGCTTCGAAGACGCCT
CTCCTTTCTCGCGTCTGACGAGACATGCGCAGGAAACACCGTCTACGTCGGTCTAGGCCTCGCCTCGCTCGTCTC
GCCGCCAGCCTCACCACGTCTCTACCGCTCGGGCGTCTCACTCATCTCGTTCTGTATCGGGTCTTTTCTCTTCGC
CCGCTTTCATCGCCGCTTCTCTCCACGTCGCCGCTGGGTGCTCTGCGTCTCCTTCGCCGTCCAGGCTGTCCTCAT
CGTTGCCGCCGCTCTCATCATATCCATGGCGCCGCCGGCCCGTGACGATGCCGTCGACTGGACCGTTTTGCTGCC
TCTCGCTCTCGTCGCGTTTCAGAGTTGCGGCCAGGCAGTGGCCAGCCGCGCGCTCCGTCATAATGCTCTGACTAG
CGTCGTCCTCACCAGCATCTACTGCGACCTCTTCTCCGACCAGGACCTCTTTGCCCGTGCCAACGTCGAGCGCAA
CCGACGCGCTGCCGCTCCTCTACTACTGCTTCTTGGTGCCGTCGCCGGAGGCCTCTTGGCTCATAGCTCCTTGGG
TATCAGCGGTGCCCTGTGGTGCGCTGCCGCCGTCAAGCTCTGTATGGTTATAGCCTGGCTCTCGTGGCCACCAGA
GAGCGATGATTCGCGGCGATAAGGACCTCGCGGCTTGGTCTTCCTCCTACCTATTCCATATCCAAGTTATACGAC
ATGAACCAACGCCAGCCACTGTGTGCCTCGCCCTCACCGATCAACGATAAGTTTCAGTGACCGCTAATCCTATTG
GTAGCTTATCGGGACCTGCCCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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