© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|02708 |
| Gene name | |
| Location | scaffold_02:4473471..4475414 |
| Strand | - |
| Gene length (bp) | 1943 |
| Transcript length (bp) | 1770 |
| Coding sequence length (bp) | 1770 |
| Protein length (aa) | 590 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.6E-44 | 82 | 558 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 4.7E-16 | 119 | 504 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 28 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 94 | 116 | 22 |
| 2 | 151 | 170 | 19 |
| 3 | 180 | 202 | 22 |
| 4 | 215 | 237 | 22 |
| 5 | 264 | 286 | 22 |
| 6 | 348 | 370 | 22 |
| 7 | 397 | 416 | 19 |
| 8 | 429 | 446 | 17 |
| 9 | 456 | 478 | 22 |
| 10 | 491 | 513 | 22 |
| 11 | 528 | 547 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|02708 MAMASEPSIVVANSNSNNNNNNSNNKNKASVKANKTTGGNSAYHNFHNDFIHVTDVNERRRLALAEVDRAPFGWY HVRAIAVAGVGFFTDSYDIFTASLLTIMLGIVYYPGVGHLSTSSDDAIKLATSAGTIVGQLGFGCLADIVGRRQM YGLELFVIIVATIGQALTSGSPSCSIVGLVIFWRVIMGIGIGGDYPLSSIITSEFATTKWRGAMMAAVFAMQGLG QLGAAMVMLFVTLGFRSQLEVAPDIAHCDGMCRVSVDRMWRILIGFGAVPACIALYFRLTIPETPRYTFDAARDV EKAPAQVMAYESGARVGEQDAGAGSESSETPKASWSDFFRHYSKLKNFKLILGTAGSWFCLDVAFYGLSLNNGTI LSVIGYSTKNSNNVYDFLYKTAVGNLIIVLAGAVPGYWVSVFTIDILGRKKIQMGGFIILVAILVSMGFAYNHLS PEGLLGLYVVAQFFFNFGPNTTTFIVPGEVFPTRYRSTSHGISAAMGKLGSIIGQSAIATLRTHGATKENPSPWM NHVLQIYALFMLLGCFTTLLIPETARKTLEELNGEDTYAIEAGDTSGDTSPVKPRLTPGSSNAE* |
| Coding | >Ophcf2|02708 ATGGCCATGGCCTCGGAGCCGTCCATCGTCGTCGCCAACAGCAACAGTAACAACAATAACAACAACAGCAACAAC AAAAATAAGGCGTCCGTCAAGGCCAACAAGACGACGGGCGGTAACAGCGCCTACCACAACTTTCACAACGACTTC ATCCATGTTACCGACGTCAATGAGCGCCGCCGTCTCGCCCTGGCCGAGGTCGATCGCGCCCCTTTCGGCTGGTAT CATGTCCGGGCCATTGCCGTCGCCGGCGTCGGCTTCTTCACGGACTCGTACGACATCTTCACGGCCTCGCTGTTG ACCATTATGCTGGGAATCGTCTACTACCCGGGCGTCGGTCACTTGTCCACCAGCTCTGACGATGCCATCAAGCTC GCCACCTCGGCCGGCACCATTGTCGGCCAGCTCGGCTTCGGCTGCCTGGCTGACATCGTCGGACGCAGGCAAATG TACGGGCTTGAGCTCTTCGTCATCATCGTCGCCACCATCGGCCAGGCCTTGACCAGCGGCTCTCCGTCCTGCAGC ATCGTCGGCCTGGTCATCTTCTGGCGCGTCATCATGGGCATCGGCATCGGCGGCGACTATCCGCTGTCGTCCATC ATCACCTCAGAATTCGCCACGACCAAGTGGAGAGGCGCCATGATGGCCGCAGTCTTTGCCATGCAGGGTCTCGGC CAGCTGGGCGCCGCCATGGTCATGCTCTTCGTCACTCTCGGCTTCCGCTCCCAGCTCGAGGTGGCGCCCGACATT GCTCACTGCGACGGCATGTGCCGGGTCTCCGTCGACAGGATGTGGAGGATACTCATCGGCTTCGGCGCCGTCCCC GCCTGCATCGCCCTTTACTTCCGTCTCACGATACCCGAAACGCCTCGCTACACCTTTGACGCGGCCCGCGACGTC GAAAAGGCCCCGGCCCAAGTCATGGCCTACGAGTCCGGTGCGCGCGTCGGCGAGCAAGATGCCGGGGCCGGGTCC GAGAGTTCCGAGACGCCCAAGGCCAGCTGGTCCGACTTCTTCCGTCACTACTCTAAGCTCAAGAACTTCAAGCTG ATCCTAGGCACCGCCGGCTCATGGTTCTGCCTCGATGTCGCCTTTTACGGCCTGTCTCTCAACAACGGCACTATC CTCAGCGTCATCGGCTACTCGACGAAAAACTCCAACAACGTCTACGACTTTCTCTACAAGACGGCCGTTGGAAAC CTCATCATTGTCCTTGCCGGCGCCGTCCCGGGCTACTGGGTGTCCGTCTTTACCATTGACATCTTGGGTCGTAAG AAGATACAGATGGGCGGCTTCATCATCCTCGTGGCCATCCTCGTCTCCATGGGTTTCGCCTACAATCACCTCTCG CCCGAGGGTCTCTTGGGTCTTTACGTCGTTGCCCAGTTCTTCTTCAACTTTGGTCCCAACACGACCACCTTTATC GTCCCCGGAGAGGTCTTCCCCACCCGCTACCGGTCGACATCGCACGGCATCTCAGCCGCCATGGGCAAGCTCGGG TCCATCATCGGCCAGTCGGCCATCGCGACGCTCCGAACCCACGGCGCCACCAAGGAAAACCCATCGCCGTGGATG AACCACGTGCTGCAGATCTACGCTCTCTTCATGCTCCTCGGCTGCTTCACCACGCTGCTCATCCCGGAGACGGCG CGCAAGACGCTCGAGGAGCTCAATGGCGAGGACACCTATGCCATCGAAGCCGGGGACACATCTGGCGATACCTCG CCTGTCAAGCCGCGGCTGACTCCCGGCTCGTCCAACGCGGAGTGA |
| Transcript | >Ophcf2|02708 ATGGCCATGGCCTCGGAGCCGTCCATCGTCGTCGCCAACAGCAACAGTAACAACAATAACAACAACAGCAACAAC AAAAATAAGGCGTCCGTCAAGGCCAACAAGACGACGGGCGGTAACAGCGCCTACCACAACTTTCACAACGACTTC ATCCATGTTACCGACGTCAATGAGCGCCGCCGTCTCGCCCTGGCCGAGGTCGATCGCGCCCCTTTCGGCTGGTAT CATGTCCGGGCCATTGCCGTCGCCGGCGTCGGCTTCTTCACGGACTCGTACGACATCTTCACGGCCTCGCTGTTG ACCATTATGCTGGGAATCGTCTACTACCCGGGCGTCGGTCACTTGTCCACCAGCTCTGACGATGCCATCAAGCTC GCCACCTCGGCCGGCACCATTGTCGGCCAGCTCGGCTTCGGCTGCCTGGCTGACATCGTCGGACGCAGGCAAATG TACGGGCTTGAGCTCTTCGTCATCATCGTCGCCACCATCGGCCAGGCCTTGACCAGCGGCTCTCCGTCCTGCAGC ATCGTCGGCCTGGTCATCTTCTGGCGCGTCATCATGGGCATCGGCATCGGCGGCGACTATCCGCTGTCGTCCATC ATCACCTCAGAATTCGCCACGACCAAGTGGAGAGGCGCCATGATGGCCGCAGTCTTTGCCATGCAGGGTCTCGGC CAGCTGGGCGCCGCCATGGTCATGCTCTTCGTCACTCTCGGCTTCCGCTCCCAGCTCGAGGTGGCGCCCGACATT GCTCACTGCGACGGCATGTGCCGGGTCTCCGTCGACAGGATGTGGAGGATACTCATCGGCTTCGGCGCCGTCCCC GCCTGCATCGCCCTTTACTTCCGTCTCACGATACCCGAAACGCCTCGCTACACCTTTGACGCGGCCCGCGACGTC GAAAAGGCCCCGGCCCAAGTCATGGCCTACGAGTCCGGTGCGCGCGTCGGCGAGCAAGATGCCGGGGCCGGGTCC GAGAGTTCCGAGACGCCCAAGGCCAGCTGGTCCGACTTCTTCCGTCACTACTCTAAGCTCAAGAACTTCAAGCTG ATCCTAGGCACCGCCGGCTCATGGTTCTGCCTCGATGTCGCCTTTTACGGCCTGTCTCTCAACAACGGCACTATC CTCAGCGTCATCGGCTACTCGACGAAAAACTCCAACAACGTCTACGACTTTCTCTACAAGACGGCCGTTGGAAAC CTCATCATTGTCCTTGCCGGCGCCGTCCCGGGCTACTGGGTGTCCGTCTTTACCATTGACATCTTGGGTCGTAAG AAGATACAGATGGGCGGCTTCATCATCCTCGTGGCCATCCTCGTCTCCATGGGTTTCGCCTACAATCACCTCTCG CCCGAGGGTCTCTTGGGTCTTTACGTCGTTGCCCAGTTCTTCTTCAACTTTGGTCCCAACACGACCACCTTTATC GTCCCCGGAGAGGTCTTCCCCACCCGCTACCGGTCGACATCGCACGGCATCTCAGCCGCCATGGGCAAGCTCGGG TCCATCATCGGCCAGTCGGCCATCGCGACGCTCCGAACCCACGGCGCCACCAAGGAAAACCCATCGCCGTGGATG AACCACGTGCTGCAGATCTACGCTCTCTTCATGCTCCTCGGCTGCTTCACCACGCTGCTCATCCCGGAGACGGCG CGCAAGACGCTCGAGGAGCTCAATGGCGAGGACACCTATGCCATCGAAGCCGGGGACACATCTGGCGATACCTCG CCTGTCAAGCCGCGGCTGACTCCCGGCTCGTCCAACGCGGAGTGA |
| Gene | >Ophcf2|02708 ATGGCCATGGCCTCGGAGCCGTCCATCGTCGTCGCCAACAGCAACAGTAACAACAATAACAACAACAGCAACAAC AAAAATAAGGCGTCCGTCAAGGCCAACAAGACGACGGGCGGTAACAGCGCCTACCACAACTTTCACAACGACTTC ATCCATGTTACCGACGTCAATGAGCGCCGCCGTCTCGCCCTGGCCGAGGTCGATCGCGCCCCTTTCGGCTGGTAT CATGTCCGGGCCATTGCCGTCGCCGGCGTCGGCTTCTTCACGGACTCGTACGACATCTTCACGGCCTCGCTGTTG ACCATTATGCTGGGAATCGTCTACTACCCGGGCGTCGGTCACTTGTCCACCAGCTCTGACGATGCCATCAAGCTC GCCACCTCGGCCGGCACCATTGTCGGCCAGCTCGGCTTCGGCTGCCTGGCTGACATCGTCGGACGCAGGCAAATG TACGGGCTTGAGCTCTTCGTCATCATCGTCGCCACCATCGGCCAGGCCTTGACCAGCGGCTCTCCGTCCTGCAGC ATCGTCGGCCTGGTCATCTTCTGGCGCGTCATCATGGGCATCGGCATCGGCGGCGACTATCCGCTGTCGTCCATC ATCACCTCAGAGTCGGTCCTCTCCTCTCCAGTTCTTTCCCCCGGTGACGGTCACTAACCATCGAGCCTCAGATTC GCCACGACCAAGTGGAGAGGCGCCATGATGGCCGCAGTCTTTGCCATGCAGGGTCTCGGCCAGCTGGGCGCCGCC ATGGTCATGCTCTTCGTCACTCTCGGCTTCCGCTCCCAGCTCGAGGTGGCGCCCGACATTGCTCACTGCGACGGC ATGTGCCGGGTCTCCGTCGACAGGATGTGGAGGATACTCATCGGCTTCGGCGCCGTCCCCGCCTGCATCGCCCTT TACTGTGAGCCGTTCTGCCCTCTGTTACGTTTTTCGAGCCACTGACATGTCGATCCCTACAGTCCGTCTCACGAT ACCCGAAACGCCTCGCTACACCTTTGACGCGGCCCGCGACGTCGAAAAGGCCCCGGCCCAAGTCATGGCCTACGA GTCCGGTGCGCGCGTCGGCGAGCAAGATGCCGGGGCCGGGTCCGAGAGTTCCGAGACGCCCAAGGCCAGCTGGTC CGACTTCTTCCGTCACTACTCTAAGCTCAAGAACTTCAAGCTGATCCTAGGCACCGCCGGCTCATGGTTCTGCCT CGATGTCGCCTTTTACGGCCTGTCTCTCAACAACGGCACTATCCTCAGCGTCATCGGCTACTCGACGAAAAACTC CAACAACGTCTACGACTTTCTCTACAAGACGGCCGTTGGAAACCTCATCATTGTCCTTGCCGGCGCCGTCCCGGG CTACTGGGTGTCCGTCTTTACCATTGACATCTTGGGTCGTAAGAAGATACAGATGGGCGGCTTCATCATCCTCGT GGCCATCCTCGTCTCCATGGGTTTCGCCTACAATCACCTCTCGCCCGAGGGTCTCTTGGGTCTTTACGTCGTTGC CCAGTTCTTCTTCAACTTTGGTACGTTTTGCCTCGTTTTCTTTCCCCTCGACAACTGCTGACCAGCAACGTCTAG GTCCCAACACGACCACCTTTATCGTCCCCGGAGAGGTCTTCCCCACCCGCTACCGGTCGACATCGCACGGCATCT CAGCCGCCATGGGCAAGCTCGGGTCCATCATCGGCCAGTCGGCCATCGCGACGCTCCGAACCCACGGCGCCACCA AGGAAAACCCATCGCCGTGGATGAACCACGTGCTGCAGATCTACGCTCTCTTCATGCTCCTCGGCTGCTTCACCA CGCTGCTCATCCCGGAGACGGCGCGCAAGACGCTCGAGGAGCTCAATGGCGAGGACACCTATGCCATCGAAGCCG GGGACACATCTGGCGATACCTCGCCTGTCAAGCCGCGGCTGACTCCCGGCTCGTCCAACGCGGAGTGA |