© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|02707 |
| Gene name | |
| Location | scaffold_02:4469614..4472500 |
| Strand | + |
| Gene length (bp) | 2886 |
| Transcript length (bp) | 2574 |
| Coding sequence length (bp) | 2574 |
| Protein length (aa) | 858 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00999 | Na_H_Exchanger | Sodium/hydrogen exchanger family | 5.6E-58 | 56 | 444 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0015299 | solute:proton antiporter activity | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0015298 | solute:cation antiporter activity | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0009987 | cellular process | No |
| GO:0006810 | transport | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0022804 | active transmembrane transporter activity | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0015291 | secondary active transmembrane transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0015297 | antiporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006811 | ion transport | No |
| GO:0008150 | biological_process | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cell membrane | Transmembrane domain | 0.1218 | 0.1257 | 0.1039 | 0.6652 | 0.2993 | 0.0096 | 0.5123 | 0.4733 | 0.3737 | 0.01 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 46 | 68 | 22 |
| 2 | 75 | 97 | 22 |
| 3 | 112 | 134 | 22 |
| 4 | 141 | 163 | 22 |
| 5 | 178 | 200 | 22 |
| 6 | 212 | 234 | 22 |
| 7 | 244 | 266 | 22 |
| 8 | 287 | 309 | 22 |
| 9 | 333 | 355 | 22 |
| 10 | 362 | 384 | 22 |
| 11 | 394 | 416 | 22 |
| 12 | 429 | 451 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 18.59 | 10.09 | 27.10 |
| Alive | In ants, during behavior modification | 9.55 | 4.16 | 14.93 |
| Dead | In ants, recently dead | 7.44 | 3.27 | 11.61 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.002117 | yes |
| Alive | Dead | 0.246014 | no |
| Dead | Fungus | 0.000238 | yes |
| Orthofinder run ID | 4 |
| Orthogroup | 2525 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|02707 MSTISSVVSATLSSAAAASTSDNRVPPQGGVLEGANPVHYDPSNPIILFIIQTSLIVIVCHALHWPLSKIRQPRV IAEVIGGIILGPSVMGRVPGFRAAIFPRESLPNLNLVANLGLVLYLFLIGLETDVRFLLSNWRVATSVAFAGLAL PFGVGCALAWGVYHAFKDDNGVHPTQFTTYMLFIGIAIAITAFPVLCRILTELKLLDTNVGVITLSAGVANDVVG WILLALCVALVNAGSGLTALWILLCCVAYMLLLLYAVKPVLIWVLRRTGSIENDPSQSVISLILLIALGSAFFTG IIGVHPIFGGFMAGLILPRENRFNIRVTEKLEDLIGAIFLPLYFTLSGLNTNLGLLDTGLAWGYVFATTIVALVT KIMGASVAARLNGLVWRESFTIGVLMSCKGLVELIVLNIGLQANILSTRTFTIFVVMALLTTFLTTPIVSMLYPP WYQVKIEAWRRGGIDWDTGAPLSPSDSDDSAQKRPVEEMRVGRLLAYLRLDSMPALLNLLPLFGGPAAAPTTKTG TEGREAPVWVHGTRLLQLTDRDSSVMTVAQVSDFSSHDPVVNTFRTVARLHNLAVSGEVAVMPESRFAEALVGRA ATLSSDFVVLPWSETGGMGDSPVLSTTTLEDRLTSTYSSFVKSVLDSCRCSVGVFFSRTDAASTTVTAQDSDRIK LVRRCSTGVLPTGVPTAPMPDKPHHIFLPYFGGEDDGWALRLVLQLCRGSDATASIMRVSASDADASRWSAGGVD PFDSAQSDLSADAAARISFTTCRGSTTMEELLQMADSETRRPQPELKPSSLVVVGYASGVGLQQGKLAKVTNENL VGGLGLVAGHLVAGGVQADVLVVRGPRPVEGS* |
| Coding | >Ophcf2|02707 ATGTCTACAATCAGCTCCGTCGTCTCCGCGACTTTGTCTTCCGCCGCAGCCGCCTCTACCTCTGACAATCGCGTC CCTCCTCAGGGCGGCGTCCTCGAGGGCGCAAATCCCGTCCACTATGACCCGAGCAACCCGATTATTCTCTTCATC ATTCAGACGAGCTTGATCGTCATCGTCTGCCATGCCCTGCACTGGCCACTGTCCAAGATCCGGCAACCTCGCGTC ATCGCCGAGGTCATTGGCGGCATCATACTCGGCCCCTCTGTCATGGGCCGCGTCCCGGGCTTCCGGGCTGCCATC TTCCCCAGAGAGTCGCTGCCTAACCTGAACCTCGTCGCGAACCTAGGTCTTGTCCTCTATCTCTTTCTCATCGGC CTCGAGACCGACGTCCGCTTCCTCCTCAGCAACTGGCGCGTCGCCACCTCGGTCGCCTTTGCCGGTCTTGCTCTT CCGTTCGGCGTCGGCTGTGCCCTGGCCTGGGGAGTGTACCATGCCTTCAAGGACGACAATGGCGTTCATCCTACT CAATTTACGACTTATATGCTCTTCATTGGAATCGCCATTGCCATTACCGCATTCCCCGTCCTCTGCCGCATTTTG ACGGAGCTGAAGCTTCTCGACACCAACGTCGGTGTCATCACGCTGTCGGCCGGAGTGGCCAACGATGTTGTCGGC TGGATACTTTTGGCGCTCTGCGTCGCCCTGGTCAACGCGGGCAGCGGGCTTACGGCGCTATGGATCCTCCTTTGC TGTGTCGCCTACATGCTGCTGCTGCTCTATGCCGTCAAGCCCGTCTTGATATGGGTCCTCCGCCGGACGGGAAGT ATCGAGAACGACCCGTCACAGAGCGTCATTTCCCTCATCCTCCTCATCGCCTTGGGGTCGGCCTTTTTCACCGGC ATCATCGGTGTTCATCCCATCTTTGGAGGCTTCATGGCCGGCCTCATCCTGCCGCGCGAAAACAGGTTCAACATT CGCGTGACGGAAAAGCTCGAGGATCTCATTGGAGCCATCTTCTTGCCTCTATACTTTACCCTCTCCGGCCTCAAC ACTAATCTCGGTCTCCTCGACACGGGGCTTGCCTGGGGCTACGTCTTCGCCACCACCATTGTCGCGCTCGTGACC AAGATTATGGGCGCCTCGGTAGCAGCCCGACTAAATGGCTTGGTGTGGCGCGAGTCGTTTACCATTGGTGTGCTC ATGAGCTGCAAGGGCCTTGTCGAGCTGATTGTACTGAACATCGGCCTCCAAGCCAATATTCTCAGCACCAGAACC TTTACCATCTTCGTCGTCATGGCGCTGCTCACTACCTTCTTGACAACGCCCATTGTATCGATGCTCTACCCGCCG TGGTACCAGGTCAAGATTGAGGCCTGGAGACGCGGAGGGATCGACTGGGATACGGGCGCCCCTCTCTCGCCTTCG GACTCGGACGATTCAGCACAAAAGAGGCCCGTGGAAGAGATGCGGGTCGGCAGGTTGCTCGCCTATCTCCGGCTG GACAGCATGCCGGCCCTGCTCAACCTCTTACCCTTGTTTGGCGGACCTGCTGCTGCTCCGACGACAAAGACGGGG ACTGAGGGACGAGAGGCGCCCGTCTGGGTGCACGGCACTCGCCTGCTGCAACTCACGGATCGTGACTCGTCGGTC ATGACGGTGGCCCAGGTGTCCGACTTTAGCAGCCACGATCCCGTCGTCAACACGTTCCGCACCGTCGCACGCCTG CATAATCTCGCCGTCTCGGGTGAGGTGGCCGTCATGCCCGAGTCGCGCTTCGCCGAAGCTCTCGTCGGCAGGGCG GCCACCTTGTCGTCGGACTTTGTGGTGCTCCCGTGGAGCGAGACGGGCGGCATGGGCGACTCGCCTGTCCTTTCT ACGACGACGCTCGAAGACAGGTTGACTTCGACGTACAGCTCCTTTGTCAAGTCGGTGCTCGACTCGTGCCGCTGC AGCGTCGGCGTCTTCTTCTCGCGTACCGACGCGGCGAGCACCACCGTGACGGCACAGGATTCGGATCGTATCAAG CTGGTTCGCAGGTGTTCGACGGGCGTGCTTCCCACCGGAGTCCCGACGGCGCCGATGCCCGACAAGCCTCATCAC ATCTTCCTGCCCTACTTTGGTGGCGAGGATGACGGATGGGCTCTGCGGCTCGTGCTCCAGCTGTGTCGGGGATCA GACGCCACGGCATCCATCATGCGCGTCTCTGCTTCTGATGCAGACGCGTCAAGATGGTCAGCCGGCGGCGTGGAT CCCTTCGACTCCGCGCAGTCGGACCTCTCAGCCGACGCGGCCGCCCGCATCAGCTTCACGACGTGTCGCGGGTCG ACGACGATGGAGGAGCTCTTGCAGATGGCCGACTCGGAGACGAGACGGCCGCAGCCGGAGCTGAAGCCATCGAGC CTCGTCGTCGTCGGATACGCAAGCGGCGTGGGCTTACAGCAGGGTAAGCTGGCCAAGGTGACGAACGAGAATCTG GTCGGCGGTTTGGGGCTGGTGGCGGGTCATCTTGTTGCTGGGGGGGTGCAGGCCGATGTGCTTGTGGTCCGGGGA CCGAGGCCGGTTGAGGGAAGCTGA |
| Transcript | >Ophcf2|02707 ATGTCTACAATCAGCTCCGTCGTCTCCGCGACTTTGTCTTCCGCCGCAGCCGCCTCTACCTCTGACAATCGCGTC CCTCCTCAGGGCGGCGTCCTCGAGGGCGCAAATCCCGTCCACTATGACCCGAGCAACCCGATTATTCTCTTCATC ATTCAGACGAGCTTGATCGTCATCGTCTGCCATGCCCTGCACTGGCCACTGTCCAAGATCCGGCAACCTCGCGTC ATCGCCGAGGTCATTGGCGGCATCATACTCGGCCCCTCTGTCATGGGCCGCGTCCCGGGCTTCCGGGCTGCCATC TTCCCCAGAGAGTCGCTGCCTAACCTGAACCTCGTCGCGAACCTAGGTCTTGTCCTCTATCTCTTTCTCATCGGC CTCGAGACCGACGTCCGCTTCCTCCTCAGCAACTGGCGCGTCGCCACCTCGGTCGCCTTTGCCGGTCTTGCTCTT CCGTTCGGCGTCGGCTGTGCCCTGGCCTGGGGAGTGTACCATGCCTTCAAGGACGACAATGGCGTTCATCCTACT CAATTTACGACTTATATGCTCTTCATTGGAATCGCCATTGCCATTACCGCATTCCCCGTCCTCTGCCGCATTTTG ACGGAGCTGAAGCTTCTCGACACCAACGTCGGTGTCATCACGCTGTCGGCCGGAGTGGCCAACGATGTTGTCGGC TGGATACTTTTGGCGCTCTGCGTCGCCCTGGTCAACGCGGGCAGCGGGCTTACGGCGCTATGGATCCTCCTTTGC TGTGTCGCCTACATGCTGCTGCTGCTCTATGCCGTCAAGCCCGTCTTGATATGGGTCCTCCGCCGGACGGGAAGT ATCGAGAACGACCCGTCACAGAGCGTCATTTCCCTCATCCTCCTCATCGCCTTGGGGTCGGCCTTTTTCACCGGC ATCATCGGTGTTCATCCCATCTTTGGAGGCTTCATGGCCGGCCTCATCCTGCCGCGCGAAAACAGGTTCAACATT CGCGTGACGGAAAAGCTCGAGGATCTCATTGGAGCCATCTTCTTGCCTCTATACTTTACCCTCTCCGGCCTCAAC ACTAATCTCGGTCTCCTCGACACGGGGCTTGCCTGGGGCTACGTCTTCGCCACCACCATTGTCGCGCTCGTGACC AAGATTATGGGCGCCTCGGTAGCAGCCCGACTAAATGGCTTGGTGTGGCGCGAGTCGTTTACCATTGGTGTGCTC ATGAGCTGCAAGGGCCTTGTCGAGCTGATTGTACTGAACATCGGCCTCCAAGCCAATATTCTCAGCACCAGAACC TTTACCATCTTCGTCGTCATGGCGCTGCTCACTACCTTCTTGACAACGCCCATTGTATCGATGCTCTACCCGCCG TGGTACCAGGTCAAGATTGAGGCCTGGAGACGCGGAGGGATCGACTGGGATACGGGCGCCCCTCTCTCGCCTTCG GACTCGGACGATTCAGCACAAAAGAGGCCCGTGGAAGAGATGCGGGTCGGCAGGTTGCTCGCCTATCTCCGGCTG GACAGCATGCCGGCCCTGCTCAACCTCTTACCCTTGTTTGGCGGACCTGCTGCTGCTCCGACGACAAAGACGGGG ACTGAGGGACGAGAGGCGCCCGTCTGGGTGCACGGCACTCGCCTGCTGCAACTCACGGATCGTGACTCGTCGGTC ATGACGGTGGCCCAGGTGTCCGACTTTAGCAGCCACGATCCCGTCGTCAACACGTTCCGCACCGTCGCACGCCTG CATAATCTCGCCGTCTCGGGTGAGGTGGCCGTCATGCCCGAGTCGCGCTTCGCCGAAGCTCTCGTCGGCAGGGCG GCCACCTTGTCGTCGGACTTTGTGGTGCTCCCGTGGAGCGAGACGGGCGGCATGGGCGACTCGCCTGTCCTTTCT ACGACGACGCTCGAAGACAGGTTGACTTCGACGTACAGCTCCTTTGTCAAGTCGGTGCTCGACTCGTGCCGCTGC AGCGTCGGCGTCTTCTTCTCGCGTACCGACGCGGCGAGCACCACCGTGACGGCACAGGATTCGGATCGTATCAAG CTGGTTCGCAGGTGTTCGACGGGCGTGCTTCCCACCGGAGTCCCGACGGCGCCGATGCCCGACAAGCCTCATCAC ATCTTCCTGCCCTACTTTGGTGGCGAGGATGACGGATGGGCTCTGCGGCTCGTGCTCCAGCTGTGTCGGGGATCA GACGCCACGGCATCCATCATGCGCGTCTCTGCTTCTGATGCAGACGCGTCAAGATGGTCAGCCGGCGGCGTGGAT CCCTTCGACTCCGCGCAGTCGGACCTCTCAGCCGACGCGGCCGCCCGCATCAGCTTCACGACGTGTCGCGGGTCG ACGACGATGGAGGAGCTCTTGCAGATGGCCGACTCGGAGACGAGACGGCCGCAGCCGGAGCTGAAGCCATCGAGC CTCGTCGTCGTCGGATACGCAAGCGGCGTGGGCTTACAGCAGGGTAAGCTGGCCAAGGTGACGAACGAGAATCTG GTCGGCGGTTTGGGGCTGGTGGCGGGTCATCTTGTTGCTGGGGGGGTGCAGGCCGATGTGCTTGTGGTCCGGGGA CCGAGGCCGGTTGAGGGAAGCTGA |
| Gene | >Ophcf2|02707 ATGTCTACAATCAGCTCCGTCGTCTCCGCGACTTTGTCTTCCGCCGCAGCCGCCTCTACCTCTGACAATCGCGTC CCTCCTCAGGGCGGCGTCCTCGAGGGCGCAAATCCCGTCCACTATGACCCGAGCAACCCGATTATTCTCTTCATC ATTCAGGTACCGCGAATGGTCTCTTGCTGCTCCGTCTAGGCTGCTGATTCGATTAGACGAGCTTGATCGTCATCG TCTGCCATGCCCTGCACTGGCCACTGTCCAAGATCCGGCAACCTCGCGTCATCGCCGAGGTCATTGGCGGCATCA TACTCGGCCCCTCTGTCATGGGCCGCGTCCCGGGCTTCCGGGCTGCCATCTTCCCCAGAGAGTCGCTGCCTAACC TGAACCTCGTCGCGAACCTAGGTCTTGTCCTCTATCTCTTTCTCATCGGCCTCGAGACCGACGTCCGCTTCCTCC TCAGCAACTGGCGCGTCGCCACCTCGGTCGCCTTTGCCGGTCTTGCTCTTCCGTTCGGCGTCGGCTGTGCCCTGG CCTGGGGAGTGTACCATGCCTTCAAGGACGACAATGGCGTTCATCCTACTCAATTTACGACTTATATGCTCTTCA TTGGAATCGCCATTGCCATTACCGTGCGTCTTTATTCCTAGAGGCATGAACCGTTTGCTGATTCTTTTCCGCGCA GGCATTCCCCGTCCTCTGCCGCATTTTGACGGAGCTGAAGCTTCTCGACACCAACGTCGGTGTCATCACGCTGTC GGCCGGAGTGGCCAACGATGTTGTCGGTCTGCAATCCCTCTCGCGTTGAGTGTCTTCGGAAGTGCCTCTGCCTCG GCAATGTTGAGGAGACACAAGCTATAGAGAACGAGACTCTTGAAACTACCCATATGCCTTTCTGCACTCACTCAG ACGCTGATACGAAGCCAACAGGCTGGATACTTTTGGCGCTCTGCGTCGCCCTGGTCAACGCGGGCAGCGGGCTTA CGGCGCTATGGATCCTCCTTTGCTGTGTCGCCTACATGCTGCTGCTGCTCTATGCCGTCAAGCCCGTCTTGATAT GGGTCCTCCGCCGGACGGGAAGTATCGAGAACGACCCGTCACAGAGCGTCATTTCCCTCATCCTCCTCATCGCCT TGGGGTCGGCCTTTTTCACCGGCATCATCGGTGTTCATCCCATCTTTGGAGGCTTCATGGCCGGCCTCATCCTGC CGCGCGAAAACAGGTTCAACATTCGCGTGACGGAAAAGCTCGAGGATCTCATTGGAGCCATCTTCTTGCCTCTAT ACTTTACCCTCTCCGGCCTCAACACTAATCTCGGTCTCCTCGACACGGGGCTTGCCTGGGGCTACGTCTTCGCCA CCACCATTGTCGCGCTCGTGACCAAGATTATGGGCGCCTCGGTAGCAGCCCGACTAAATGGCTTGGTGTGGCGCG AGTCGTTTACCATTGGTGTGCTCATGAGCTGCAAGGGCCTTGTCGAGCTGATTGTACTGGTGAGTCTCTTTGCCT CGATATGGGAGATTTCGATGCGGCTGGCTGACATGGACCTCTGCACAGAACATCGGCCTCCAAGCCAATATTCTC AGCACCAGAACCTTTACCATCTTCGTCGTCATGGCGCTGCTCACTACCTTCTTGACAACGCCCATTGTATCGATG CTCTACCCGCCGTGGTACCAGGTCAAGATTGAGGCCTGGAGACGCGGAGGGATCGACTGGGATACGGGCGCCCCT CTCTCGCCTTCGGACTCGGACGATTCAGCACAAAAGAGGCCCGTGGAAGAGATGCGGGTCGGCAGGTTGCTCGCC TATCTCCGGCTGGACAGCATGCCGGCCCTGCTCAACCTCTTACCCTTGTTTGGCGGACCTGCTGCTGCTCCGACG ACAAAGACGGGGACTGAGGGACGAGAGGCGCCCGTCTGGGTGCACGGCACTCGCCTGCTGCAACTCACGGATCGT GACTCGTCGGTCATGACGGTGGCCCAGGTGTCCGACTTTAGCAGCCACGATCCCGTCGTCAACACGTTCCGCACC GTCGCACGCCTGCATAATCTCGCCGTCTCGGGTGAGGTGGCCGTCATGCCCGAGTCGCGCTTCGCCGAAGCTCTC GTCGGCAGGGCGGCCACCTTGTCGTCGGACTTTGTGGTGCTCCCGTGGAGCGAGACGGGCGGCATGGGCGACTCG CCTGTCCTTTCTACGACGACGCTCGAAGACAGGTTGACTTCGACGTACAGCTCCTTTGTCAAGTCGGTGCTCGAC TCGTGCCGCTGCAGCGTCGGCGTCTTCTTCTCGCGTACCGACGCGGCGAGCACCACCGTGACGGCACAGGATTCG GATCGTATCAAGCTGGTTCGCAGGTGTTCGACGGGCGTGCTTCCCACCGGAGTCCCGACGGCGCCGATGCCCGAC AAGCCTCATCACATCTTCCTGCCCTACTTTGGTGGCGAGGATGACGGATGGGCTCTGCGGCTCGTGCTCCAGCTG TGTCGGGGATCAGACGCCACGGCATCCATCATGCGCGTCTCTGCTTCTGATGCAGACGCGTCAAGATGGTCAGCC GGCGGCGTGGATCCCTTCGACTCCGCGCAGTCGGACCTCTCAGCCGACGCGGCCGCCCGCATCAGCTTCACGACG TGTCGCGGGTCGACGACGATGGAGGAGCTCTTGCAGATGGCCGACTCGGAGACGAGACGGCCGCAGCCGGAGCTG AAGCCATCGAGCCTCGTCGTCGTCGGATACGCAAGCGGCGTGGGCTTACAGCAGGGTAAGCTGGCCAAGGTGACG AACGAGAATCTGGTCGGCGGTTTGGGGCTGGTGGCGGGTCATCTTGTTGCTGGGGGGGTGCAGGCCGATGTGCTT GTGGTCCGGGGACCGAGGCCGGTTGAGGGAAGCTGA |