Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02705
Gene name
Locationscaffold_02:4464801..4466198
Strand+
Gene length (bp)1397
Transcript length (bp)1272
Coding sequence length (bp)1272
Protein length (aa) 424

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02535 Zip ZIP Zinc transporter 1.9E-55 39 419

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0046873 metal ion transmembrane transporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0030001 metal ion transport Yes
GO:0051234 establishment of localization No
GO:0051179 localization No
GO:0110165 cellular anatomical entity No
GO:0009987 cellular process No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0006810 transport No
GO:0022857 transmembrane transporter activity No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0005215 transporter activity No
GO:0006812 cation transport No
GO:0008324 cation transmembrane transporter activity No
GO:0005575 cellular_component No
GO:0003674 molecular_function No
GO:0015075 ion transmembrane transporter activity No
GO:0006811 ion transport No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 57 0.5

Transmembrane Domains

Domain # Start End Length
1 39 61 22
2 74 96 22
3 116 138 22
4 269 291 22
5 296 318 22
6 325 347 22
7 362 384 22
8 405 422 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02705
MGSDFAQDVSTQSLLQELRRRGERPECGGRRTGWYDTSAHVCALFLILALSTLACGLPLISRRTTAGRLQKTIIF
YCQHVGTGVLLATAFVHLLPTAFESLTDPCLPHFFSQGYKPLPGLVAMIAAVSVVGVESYLTARRAGHSHSHAHG
FFDESDGEDGPHGDMRLSSRGAMGRRRPPEISLHDVEATEGLVAGVAPLPETTPTSDGSPRTPDSSAHDEDSDVD
DGRNHPFSTLKPGDRGATEPEQPEVPRPLASTPDQQRRQLLQCLLLEAGILFHSVFIGMAVSVATGPAFMVFLVA
ICFHQSFEGLALGSRIAAIQFPRNSLRPWLMVLAYGVTTPLGQAVGMAVHKMYDPASMGGLLVVGFMNAVSAGLL
LYAGLVQLLAEDFLTEKSYRVLKGKKRLRAYLAVVGGAVLMALVGAFA*
Coding >Ophcf2|02705
ATGGGAAGCGACTTTGCCCAAGACGTCTCTACCCAGTCGCTGCTGCAAGAGCTCCGGCGCAGGGGCGAGAGGCCC
GAGTGCGGAGGACGGCGGACCGGATGGTACGACACGTCGGCTCACGTTTGCGCCCTCTTCTTGATCTTGGCTCTC
AGCACGCTTGCATGCGGCCTTCCCTTGATCTCGCGACGCACGACGGCTGGTAGACTGCAGAAAACCATCATCTTC
TACTGTCAGCATGTCGGTACCGGCGTCCTCTTGGCCACGGCCTTTGTTCACCTACTGCCGACGGCTTTCGAATCC
CTGACGGATCCTTGCCTGCCTCATTTCTTCAGCCAAGGCTATAAGCCTCTTCCGGGTCTCGTGGCCATGATTGCT
GCTGTTTCAGTCGTCGGCGTCGAGTCTTACTTGACGGCCCGGAGAGCCGGCCACTCACATTCGCACGCGCATGGC
TTCTTTGACGAATCAGACGGCGAGGACGGTCCTCATGGCGATATGCGCCTCTCTTCGAGGGGCGCCATGGGCCGT
AGACGACCGCCGGAAATTTCGCTTCACGATGTCGAGGCTACCGAGGGCCTCGTTGCTGGTGTCGCACCTTTACCC
GAGACGACACCCACTAGCGACGGCTCACCGAGGACTCCTGATTCCTCGGCTCACGATGAGGATTCAGACGTCGAC
GATGGTCGAAACCATCCCTTTTCCACGCTTAAGCCGGGTGACCGGGGGGCGACCGAGCCGGAACAGCCGGAGGTG
CCTCGGCCGCTCGCTTCGACGCCCGACCAGCAGAGACGGCAGCTTCTGCAATGCCTCCTTTTAGAAGCTGGCATT
CTCTTCCACAGCGTCTTCATCGGCATGGCCGTTTCGGTGGCGACGGGCCCAGCTTTTATGGTGTTTCTCGTCGCC
ATCTGCTTCCACCAGTCATTCGAGGGCCTCGCGCTCGGTAGCCGGATCGCGGCCATCCAGTTTCCTCGAAACTCG
CTGCGACCTTGGCTGATGGTGCTCGCTTACGGGGTGACGACGCCGCTGGGACAAGCCGTCGGCATGGCTGTTCAC
AAAATGTACGACCCGGCTTCCATGGGCGGCCTGCTCGTCGTGGGCTTCATGAACGCCGTTTCGGCCGGGTTGCTG
CTTTATGCCGGGCTCGTCCAGCTGCTGGCCGAGGACTTTTTGACGGAGAAGAGTTACAGGGTGCTCAAGGGGAAG
AAGAGGCTTCGTGCGTACCTCGCCGTCGTCGGCGGAGCGGTACTCATGGCTTTGGTGGGGGCGTTTGCTTGA
Transcript >Ophcf2|02705
ATGGGAAGCGACTTTGCCCAAGACGTCTCTACCCAGTCGCTGCTGCAAGAGCTCCGGCGCAGGGGCGAGAGGCCC
GAGTGCGGAGGACGGCGGACCGGATGGTACGACACGTCGGCTCACGTTTGCGCCCTCTTCTTGATCTTGGCTCTC
AGCACGCTTGCATGCGGCCTTCCCTTGATCTCGCGACGCACGACGGCTGGTAGACTGCAGAAAACCATCATCTTC
TACTGTCAGCATGTCGGTACCGGCGTCCTCTTGGCCACGGCCTTTGTTCACCTACTGCCGACGGCTTTCGAATCC
CTGACGGATCCTTGCCTGCCTCATTTCTTCAGCCAAGGCTATAAGCCTCTTCCGGGTCTCGTGGCCATGATTGCT
GCTGTTTCAGTCGTCGGCGTCGAGTCTTACTTGACGGCCCGGAGAGCCGGCCACTCACATTCGCACGCGCATGGC
TTCTTTGACGAATCAGACGGCGAGGACGGTCCTCATGGCGATATGCGCCTCTCTTCGAGGGGCGCCATGGGCCGT
AGACGACCGCCGGAAATTTCGCTTCACGATGTCGAGGCTACCGAGGGCCTCGTTGCTGGTGTCGCACCTTTACCC
GAGACGACACCCACTAGCGACGGCTCACCGAGGACTCCTGATTCCTCGGCTCACGATGAGGATTCAGACGTCGAC
GATGGTCGAAACCATCCCTTTTCCACGCTTAAGCCGGGTGACCGGGGGGCGACCGAGCCGGAACAGCCGGAGGTG
CCTCGGCCGCTCGCTTCGACGCCCGACCAGCAGAGACGGCAGCTTCTGCAATGCCTCCTTTTAGAAGCTGGCATT
CTCTTCCACAGCGTCTTCATCGGCATGGCCGTTTCGGTGGCGACGGGCCCAGCTTTTATGGTGTTTCTCGTCGCC
ATCTGCTTCCACCAGTCATTCGAGGGCCTCGCGCTCGGTAGCCGGATCGCGGCCATCCAGTTTCCTCGAAACTCG
CTGCGACCTTGGCTGATGGTGCTCGCTTACGGGGTGACGACGCCGCTGGGACAAGCCGTCGGCATGGCTGTTCAC
AAAATGTACGACCCGGCTTCCATGGGCGGCCTGCTCGTCGTGGGCTTCATGAACGCCGTTTCGGCCGGGTTGCTG
CTTTATGCCGGGCTCGTCCAGCTGCTGGCCGAGGACTTTTTGACGGAGAAGAGTTACAGGGTGCTCAAGGGGAAG
AAGAGGCTTCGTGCGTACCTCGCCGTCGTCGGCGGAGCGGTACTCATGGCTTTGGTGGGGGCGTTTGCTTGA
Gene >Ophcf2|02705
ATGGGAAGCGACTTTGCCCAAGGTAACCTTTCCCACGGGTTGGTGCCCCGCGAATTGCCCGCATTGCAGCTGACG
GCCATGACTCTCGACAGACGTCTCTACCCAGTCGCTGCTGCAAGAGCTCCGGCGCAGGGGCGAGAGGCCCGAGTG
CGGAGGACGGCGGACCGGATGGTACGACACGTCGGCTCACGTTTGCGCCCTCTTCTTGATCTTGGCTCTCAGCAC
GCTTGGTGTGTCTCCCTCTCCTGCGGCGGCATGGCTGAAGCGATTCTGACGGCAAGGCAGCATGCGGCCTTCCCT
TGATCTCGCGACGCACGACGGCTGGTAGACTGCAGAAAACCATCATCTTCTACTGTCAGCATGTCGGTACCGGCG
TCCTCTTGGCCACGGCCTTTGTTCACCTACTGCCGACGGCTTTCGAATCCCTGACGGATCCTTGCCTGCCTCATT
TCTTCAGCCAAGGCTATAAGCCTCTTCCGGGTCTCGTGGCCATGATTGCTGCTGTTTCAGTCGTCGGCGTCGAGT
CTTACTTGACGGCCCGGAGAGCCGGCCACTCACATTCGCACGCGCATGGCTTCTTTGACGAATCAGACGGCGAGG
ACGGTCCTCATGGCGATATGCGCCTCTCTTCGAGGGGCGCCATGGGCCGTAGACGACCGCCGGAAATTTCGCTTC
ACGATGTCGAGGCTACCGAGGGCCTCGTTGCTGGTGTCGCACCTTTACCCGAGACGACACCCACTAGCGACGGCT
CACCGAGGACTCCTGATTCCTCGGCTCACGATGAGGATTCAGACGTCGACGATGGTCGAAACCATCCCTTTTCCA
CGCTTAAGCCGGGTGACCGGGGGGCGACCGAGCCGGAACAGCCGGAGGTGCCTCGGCCGCTCGCTTCGACGCCCG
ACCAGCAGAGACGGCAGCTTCTGCAATGCCTCCTTTTAGAAGCTGGCATTCTCTTCCACAGCGTCTTCATCGGCA
TGGCCGTTTCGGTGGCGACGGGCCCAGCTTTTATGGTGTTTCTCGTCGCCATCTGCTTCCACCAGTCATTCGAGG
GCCTCGCGCTCGGTAGCCGGATCGCGGCCATCCAGTTTCCTCGAAACTCGCTGCGACCTTGGCTGATGGTGCTCG
CTTACGGGGTGACGACGCCGCTGGGACAAGCCGTCGGCATGGCTGTTCACAAAATGTACGACCCGGCTTCCATGG
GCGGCCTGCTCGTCGTGGGCTTCATGAACGCCGTTTCGGCCGGGTTGCTGCTTTATGCCGGGCTCGTCCAGCTGC
TGGCCGAGGACTTTTTGACGGAGAAGAGTTACAGGGTGCTCAAGGGGAAGAAGAGGCTTCGTGCGTACCTCGCCG
TCGTCGGCGGAGCGGTACTCATGGCTTTGGTGGGGGCGTTTGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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