Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02697
Gene name
Locationscaffold_02:4450209..4450701
Strand-
Gene length (bp)492
Transcript length (bp)363
Coding sequence length (bp)363
Protein length (aa) 121

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00010 HLH Helix-loop-helix DNA-binding domain 4.0E-07 34 83

GO

GO Term Description Terminal node
GO:0046983 protein dimerization activity Yes
GO:0005515 protein binding No
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.4881 0.8118 0.0439 0.0227 0.6129 0.0008 0.0951 0.1009 0.0643 0.0037

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Helix-loop-helix

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup4032
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5939
Ophiocordyceps australis map64 (Brazil) OphauB2|20
Ophiocordyceps camponoti-floridani Ophcf2|02697 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|1700
Ophiocordyceps kimflemingae Ophio5|1846
Ophiocordyceps subramaniannii Hirsu2|811

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02697
MSSYNNQHHHVTASGDGAAPAILEEKPRLTEEEKKQNHIASEQKRRQAIREGFDRLTELVPGLEGQARSEGLVLK
RTVAFMRHQLQERMRLIDAVEKAGGYVDEQLKKVPKRSPNGSSTG*
Coding >Ophcf2|02697
ATGTCGTCATACAACAATCAGCATCACCACGTGACCGCCTCCGGAGACGGCGCCGCGCCCGCCATCCTGGAGGAG
AAGCCGCGGCTGACGGAGGAGGAGAAGAAGCAGAACCATATCGCATCCGAGCAGAAGCGTCGGCAGGCCATTCGC
GAGGGCTTCGACCGCCTTACGGAACTGGTGCCGGGCCTTGAGGGACAGGCTCGGTCCGAGGGCCTCGTGCTGAAG
CGGACTGTCGCCTTCATGCGTCACCAGCTACAGGAGCGTATGCGCCTTATCGACGCCGTGGAAAAGGCGGGCGGA
TACGTTGACGAGCAACTCAAAAAGGTGCCGAAAAGATCGCCCAACGGGAGCAGTACGGGCTGA
Transcript >Ophcf2|02697
ATGTCGTCATACAACAATCAGCATCACCACGTGACCGCCTCCGGAGACGGCGCCGCGCCCGCCATCCTGGAGGAG
AAGCCGCGGCTGACGGAGGAGGAGAAGAAGCAGAACCATATCGCATCCGAGCAGAAGCGTCGGCAGGCCATTCGC
GAGGGCTTCGACCGCCTTACGGAACTGGTGCCGGGCCTTGAGGGACAGGCTCGGTCCGAGGGCCTCGTGCTGAAG
CGGACTGTCGCCTTCATGCGTCACCAGCTACAGGAGCGTATGCGCCTTATCGACGCCGTGGAAAAGGCGGGCGGA
TACGTTGACGAGCAACTCAAAAAGGTGCCGAAAAGATCGCCCAACGGGAGCAGTACGGGCTGA
Gene >Ophcf2|02697
ATGTCGTCATACAACAATCAGCATCACCACGTGACCGCCTCCGGAGACGGCGCCGCGCCCGCCATCCTGGAGGAG
AAGCCGCGGCTGACGGAGGAGGAGAAGAAGCAGAACCATATCGCATCCGGTAGGTTTTTCGTCTTGCGGTCCGTC
GCCTGTCCCCCCGCCACGTGTCGCTAAGATCGGGGCAGAGCAGAAGCGTCGGCAGGCCATTCGCGAGGGCTTCGA
CCGCCTTACGGAACTGGTGCCGGGCCTTGAGGGACAGGCTCGGTCCGAGGGCCTCGTGCTGAAGCGGACTGTCGC
CTTCATGCGTCACCAGCTACAGGAGCGTATGCGCCTTATCGACGCCGTGGAAAAGGCGGGCGGATACGTTGACGA
GCAACTCAAAAAGTTGGATGGCTGCCTTCCTGCTGCGCTCTTCGACCGCTGATCTTTTATTCTTACGATTCATAC
AGGGTGCCGAAAAGATCGCCCAACGGGAGCAGTACGGGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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