Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|02694
Gene name
Location	scaffold_02:4443594..4444837
Strand	+
Gene length (bp)	1243
Transcript length (bp)	1032
Coding sequence length (bp)	1032
Protein length (aa)	344

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00107	ADH_zinc_N	Zinc-binding dehydrogenase	8.2E-32	154	277
PF13602	ADH_zinc_N_2	Zinc-binding dehydrogenase	5.2E-13	187	333
PF08240	ADH_N	Alcohol dehydrogenase GroES-like domain	5.3E-05	29	91

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 35	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|02694 MRAIVINKYVEKASDLTVTTAPDPTPNNEEYTIRIHAAAANFFDILQIQGRYQTQPPFPWVAGVEFAGTVLSVPT SSSPPPTFKVGDRVFGGTQGAFATRVCAGAGTIRAVPEGWTFSDAAGLFVTAPTSYAALVTRAGVKEGDVVLVHA AAGGVGLAAVQVAKAFGATVIATASSADKLAVARSYGADHVISYTSSDWPSRVKELTAGKRGVDIVFDPVGLVDA STKCTAWNGRILIVGFAAGAIEKVPVNKVLLKNIALVGIFWGAYAVNQPEVVPQVWDGVMRLISEGKLRPTVYHD DSGRGGGGFHGLDSVKDALSALASRRTWGKVVINIPHHETSRL*
Coding	>Ophcf2\|02694 ATGCGCGCAATCGTCATAAACAAATACGTCGAGAAAGCCTCAGACCTAACAGTAACAACAGCCCCAGACCCAACC CCCAACAACGAAGAATACACGATCCGAATCCACGCCGCCGCCGCAAACTTCTTCGACATACTTCAAATCCAAGGC CGCTACCAAACACAACCACCCTTCCCATGGGTAGCAGGCGTGGAATTCGCCGGCACCGTCCTCTCCGTGCCGACC TCATCTTCACCGCCGCCGACTTTCAAGGTGGGAGATCGGGTCTTTGGCGGGACGCAGGGGGCGTTCGCGACGAGG GTTTGTGCCGGGGCCGGGACGATTCGTGCCGTTCCCGAGGGGTGGACGTTTTCGGATGCCGCCGGTTTGTTCGTC ACTGCGCCGACGAGTTATGCCGCTCTCGTCACTAGAGCGGGTGTCAAGGAGGGGGATGTAGTCCTCGTTCACGCC GCAGCAGGCGGAGTCGGACTCGCCGCCGTGCAAGTGGCGAAAGCCTTCGGAGCAACCGTCATCGCAACAGCCTCG TCGGCCGACAAACTGGCCGTGGCACGATCCTACGGCGCAGATCATGTCATCTCCTACACCTCCTCAGACTGGCCC TCGCGCGTCAAGGAACTCACGGCCGGAAAGCGAGGCGTCGACATCGTCTTCGACCCTGTAGGCCTGGTCGACGCC TCGACGAAATGCACGGCGTGGAACGGACGGATCCTCATCGTCGGCTTCGCAGCGGGCGCCATTGAGAAAGTTCCG GTCAACAAGGTCCTTCTTAAGAATATCGCTCTTGTTGGCATCTTTTGGGGCGCCTACGCCGTTAACCAGCCAGAG GTTGTGCCGCAGGTTTGGGATGGGGTTATGCGGTTGATTTCGGAGGGGAAGCTGAGGCCGACTGTTTATCATGAT GATAGTGGTCGTGGTGGTGGTGGTTTTCATGGGTTGGATAGTGTCAAGGATGCTCTCTCTGCTTTGGCTTCGCGT CGGACTTGGGGAAAGGTTGTCATCAACATACCGCACCATGAGACGAGCCGGTTGTGA
Transcript	>Ophcf2\|02694 ATGCGCGCAATCGTCATAAACAAATACGTCGAGAAAGCCTCAGACCTAACAGTAACAACAGCCCCAGACCCAACC CCCAACAACGAAGAATACACGATCCGAATCCACGCCGCCGCCGCAAACTTCTTCGACATACTTCAAATCCAAGGC CGCTACCAAACACAACCACCCTTCCCATGGGTAGCAGGCGTGGAATTCGCCGGCACCGTCCTCTCCGTGCCGACC TCATCTTCACCGCCGCCGACTTTCAAGGTGGGAGATCGGGTCTTTGGCGGGACGCAGGGGGCGTTCGCGACGAGG GTTTGTGCCGGGGCCGGGACGATTCGTGCCGTTCCCGAGGGGTGGACGTTTTCGGATGCCGCCGGTTTGTTCGTC ACTGCGCCGACGAGTTATGCCGCTCTCGTCACTAGAGCGGGTGTCAAGGAGGGGGATGTAGTCCTCGTTCACGCC GCAGCAGGCGGAGTCGGACTCGCCGCCGTGCAAGTGGCGAAAGCCTTCGGAGCAACCGTCATCGCAACAGCCTCG TCGGCCGACAAACTGGCCGTGGCACGATCCTACGGCGCAGATCATGTCATCTCCTACACCTCCTCAGACTGGCCC TCGCGCGTCAAGGAACTCACGGCCGGAAAGCGAGGCGTCGACATCGTCTTCGACCCTGTAGGCCTGGTCGACGCC TCGACGAAATGCACGGCGTGGAACGGACGGATCCTCATCGTCGGCTTCGCAGCGGGCGCCATTGAGAAAGTTCCG GTCAACAAGGTCCTTCTTAAGAATATCGCTCTTGTTGGCATCTTTTGGGGCGCCTACGCCGTTAACCAGCCAGAG GTTGTGCCGCAGGTTTGGGATGGGGTTATGCGGTTGATTTCGGAGGGGAAGCTGAGGCCGACTGTTTATCATGAT GATAGTGGTCGTGGTGGTGGTGGTTTTCATGGGTTGGATAGTGTCAAGGATGCTCTCTCTGCTTTGGCTTCGCGT CGGACTTGGGGAAAGGTTGTCATCAACATACCGCACCATGAGACGAGCCGGTTGTGA
Gene	>Ophcf2\|02694 ATGCGCGCAATCGTCATAAACAAATACGTCGAGGTTCAACAACCCCCTTTCGTAACCTCGTCACATACGTAAAAC AGATGACAGACAACCGTTGACACCAGATAGAAAGCCTCAGACCTAACAGTAACAACAGCCCCAGACCCAACCCCC AACAACGAAGAATACACGATCCGAATCCACGCCGCCGCCGCAAACTTCTTCGACATACTTCAAATCCAAGGCCGC TACCAAACACAACCACGTACTCGTCAACCCCCCCCCCCCAATCAAGCCCCCCTCACCCCAAAGCCAGCTGACACG AAACGCAAGCCTTCCCATGGGTAGCAGGCGTGGAATTCGCCGGCACCGTCCTCTCCGTGCCGACCTCATCTTCAC CGCCGCCGACTTTCAAGGTGGGAGATCGGGTCTTTGGCGGGACGCAGGGGGCGTTCGCGACGAGGGTTTGTGCCG GGGCCGGGACGATTCGTGCCGTTCCCGAGGGGTGGACGTTTTCGGATGCCGCCGGTTTGTTCGTCACTGCGCCGA CGAGTTATGCCGCTCTCGTCACTAGAGCGGGTGTCAAGGAGGGGGATGTAGTCCTCGTTCACGCCGCAGCAGGCG GAGTCGGACTCGCCGCCGTGCAAGGTGAGTTTCCCTTTTCCCTTCCTCGGCAAGAGGAATGCGGCGAGTTTGAAA ACCAACGAGAGTGGAAAAAGTGGCGAAAGCCTTCGGAGCAACCGTCATCGCAACAGCCTCGTCGGCCGACAAACT GGCCGTGGCACGATCCTACGGCGCAGATCATGTCATCTCCTACACCTCCTCAGACTGGCCCTCGCGCGTCAAGGA ACTCACGGCCGGAAAGCGAGGCGTCGACATCGTCTTCGACCCTGTAGGCCTGGTCGACGCCTCGACGAAATGCAC GGCGTGGAACGGACGGATCCTCATCGTCGGCTTCGCAGCGGGCGCCATTGAGAAAGTTCCGGTCAACAAGGTCCT TCTTAAGAATATCGCTCTTGTTGGCATCTTTTGGGGCGCCTACGCCGTTAACCAGCCAGAGGTTGTGCCGCAGGT TTGGGATGGGGTTATGCGGTTGATTTCGGAGGGGAAGCTGAGGCCGACTGTTTATCATGATGATAGTGGTCGTGG TGGTGGTGGTTTTCATGGGTTGGATAGTGTCAAGGATGCTCTCTCTGCTTTGGCTTCGCGTCGGACTTGGGGAAA GGTTGTCATCAACATACCGCACCATGAGACGAGCCGGTTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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