Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02664
Gene name
Locationscaffold_02:4369799..4370831
Strand-
Gene length (bp)1032
Transcript length (bp)918
Coding sequence length (bp)918
Protein length (aa) 306

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 131 153 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02664
MTVHPTDAATQGMAIHGLRFLNDEWNDSISNGDVFTVRWNQSLAKTGSGLGVFQVTYPKDGVVVYELVSNLTDAI
EGDGASCKWTPQNLDKQGLYAMWLTSGQATHPNWTLSPPWVPKAGAGSQGTPWAAPFLIPVICLLGLYAISLTGY
LVYRRRKKARTEKARTDPGMILRGRNVSIDSPITAQALRRPETGIEKQGIVGMVNAEPDMEEHIGVNSLPGIGRT
ARRTDDDDDEYDDDDLGHHMPRNPAGRGIRIVTSSGPKSEAEERLLMTPVQSAGSAVSSTQVTPVGRNFSRPVQT
QRIFS*
Coding >Ophcf2|02664
ATGACGGTTCACCCAACAGACGCGGCCACTCAGGGCATGGCCATTCACGGCCTTCGATTCCTCAACGATGAATGG
AACGATAGCATTTCCAACGGCGACGTCTTCACCGTCCGATGGAACCAGTCTCTTGCCAAAACCGGCTCCGGCCTG
GGCGTGTTCCAAGTAACGTATCCGAAGGACGGCGTCGTCGTGTACGAGCTGGTATCGAATCTGACTGATGCAATC
GAGGGAGACGGCGCCTCGTGTAAATGGACGCCGCAGAACCTGGATAAACAGGGCCTGTATGCCATGTGGCTCACG
TCTGGCCAGGCCACCCACCCCAATTGGACCCTGTCACCCCCTTGGGTCCCCAAAGCAGGCGCCGGATCGCAGGGA
ACTCCCTGGGCAGCGCCCTTTCTCATCCCCGTCATATGTCTACTCGGCCTCTACGCCATCTCCCTGACAGGCTAT
CTGGTCTATCGACGCCGGAAAAAGGCCAGGACGGAGAAGGCCCGGACGGATCCTGGCATGATCCTTCGCGGCCGC
AATGTATCCATCGACTCGCCCATCACGGCACAAGCCCTTCGCAGGCCCGAGACCGGCATAGAGAAGCAGGGCATC
GTCGGAATGGTCAACGCTGAACCTGACATGGAAGAGCATATCGGAGTTAACAGCTTGCCCGGCATAGGCCGCACA
GCTCGAAGAACCGACGACGATGACGACGAATACGATGACGATGACCTCGGCCACCACATGCCCCGGAATCCGGCC
GGCCGCGGCATCCGCATCGTCACCTCGAGCGGCCCGAAATCGGAAGCAGAAGAGCGGCTGCTGATGACGCCCGTC
CAGAGCGCCGGATCGGCCGTCTCGAGCACCCAAGTAACACCCGTCGGCCGCAACTTTTCCCGGCCTGTACAAACA
CAGAGGATCTTTTCATAG
Transcript >Ophcf2|02664
ATGACGGTTCACCCAACAGACGCGGCCACTCAGGGCATGGCCATTCACGGCCTTCGATTCCTCAACGATGAATGG
AACGATAGCATTTCCAACGGCGACGTCTTCACCGTCCGATGGAACCAGTCTCTTGCCAAAACCGGCTCCGGCCTG
GGCGTGTTCCAAGTAACGTATCCGAAGGACGGCGTCGTCGTGTACGAGCTGGTATCGAATCTGACTGATGCAATC
GAGGGAGACGGCGCCTCGTGTAAATGGACGCCGCAGAACCTGGATAAACAGGGCCTGTATGCCATGTGGCTCACG
TCTGGCCAGGCCACCCACCCCAATTGGACCCTGTCACCCCCTTGGGTCCCCAAAGCAGGCGCCGGATCGCAGGGA
ACTCCCTGGGCAGCGCCCTTTCTCATCCCCGTCATATGTCTACTCGGCCTCTACGCCATCTCCCTGACAGGCTAT
CTGGTCTATCGACGCCGGAAAAAGGCCAGGACGGAGAAGGCCCGGACGGATCCTGGCATGATCCTTCGCGGCCGC
AATGTATCCATCGACTCGCCCATCACGGCACAAGCCCTTCGCAGGCCCGAGACCGGCATAGAGAAGCAGGGCATC
GTCGGAATGGTCAACGCTGAACCTGACATGGAAGAGCATATCGGAGTTAACAGCTTGCCCGGCATAGGCCGCACA
GCTCGAAGAACCGACGACGATGACGACGAATACGATGACGATGACCTCGGCCACCACATGCCCCGGAATCCGGCC
GGCCGCGGCATCCGCATCGTCACCTCGAGCGGCCCGAAATCGGAAGCAGAAGAGCGGCTGCTGATGACGCCCGTC
CAGAGCGCCGGATCGGCCGTCTCGAGCACCCAAGTAACACCCGTCGGCCGCAACTTTTCCCGGCCTGTACAAACA
CAGAGGATCTTTTCATAG
Gene >Ophcf2|02664
ATGACGGTTCACCCAACAGACGCGGCCACTCAGGGCATGGCCATTCACGGCCTTCGATTCCTCAACGATGAATGG
AACGATAGCATTTCCAACGGCGACGTCTTCACCGTCCGATGGAACCAGTCTCTTGCCAAAACCGGCTCCGGCCTG
GGCGTGTTCCAAGTAACGTATCCGAAGGACGGCGTCGTCGTGTACGAGCTGGTATCGAATCTGACTGGTCTGTAG
CCCGTCGTGCTATCACTCTCTTGTACGGCTCACTGACCGAGTCTCTGTGATAGATGCAATCGAGGGAGACGGCGC
CTCGTGTAAATGGACGCCGCAGAACCTGGATAAACAGGGCCTGTATGCCATGTGGCTCACGTCTGGCCAGGCCAC
CCACCCCAATTGGACCCTGTCACCCCCTTGGGTCCCCAAAGCAGGCGTTGGTTCCCATCCCCTCGTTTCCCGCCC
GAGCGCCGGTCTAACGGAGACAAGGCCGGATCGCAGGGAACTCCCTGGGCAGCGCCCTTTCTCATCCCCGTCATA
TGTCTACTCGGCCTCTACGCCATCTCCCTGACAGGCTATCTGGTCTATCGACGCCGGAAAAAGGCCAGGACGGAG
AAGGCCCGGACGGATCCTGGCATGATCCTTCGCGGCCGCAATGTATCCATCGACTCGCCCATCACGGCACAAGCC
CTTCGCAGGCCCGAGACCGGCATAGAGAAGCAGGGCATCGTCGGAATGGTCAACGCTGAACCTGACATGGAAGAG
CATATCGGAGTTAACAGCTTGCCCGGCATAGGCCGCACAGCTCGAAGAACCGACGACGATGACGACGAATACGAT
GACGATGACCTCGGCCACCACATGCCCCGGAATCCGGCCGGCCGCGGCATCCGCATCGTCACCTCGAGCGGCCCG
AAATCGGAAGCAGAAGAGCGGCTGCTGATGACGCCCGTCCAGAGCGCCGGATCGGCCGTCTCGAGCACCCAAGTA
ACACCCGTCGGCCGCAACTTTTCCCGGCCTGTACAAACACAGAGGATCTTTTCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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