Protein ID | Ophcf2|02638 |
Gene name | |
Location | scaffold_02:4270774..4272146 |
Strand | - |
Gene length (bp) | 1372 |
Transcript length (bp) | 1191 |
Coding sequence length (bp) | 1191 |
Protein length (aa) | 397 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00108 | Thiolase_N | Thiolase, N-terminal domain | 2.7E-87 | 7 | 265 |
PF02803 | Thiolase_C | Thiolase, C-terminal domain | 1.0E-44 | 272 | 393 |
PF00109 | ketoacyl-synt | Beta-ketoacyl synthase, N-terminal domain | 6.4E-05 | 86 | 123 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | Yes |
GO:0003824 | catalytic activity | No |
GO:0003674 | molecular_function | No |
GO:0016746 | acyltransferase activity | No |
GO:0016740 | transferase activity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 36 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|02638 MSGLPPVYIVSVARTPIGSFLGSLSGLSATQLGAAAIKAAVERAGVKPDDVEAVYMGNVLSANLGQAPARQCSLS AGLPPSTVCTAVNKVCASSLKAVVLAAQDIMLGTASIVVAGGTESMSNTPHYLPKLRTGAKYGDQTLVDGVLVDG LTDASLAQHMGLQGELCAVENGHSRAEQDAYAIESYTRAQAATEAGLFTEMTPIDVPSARGKPPVRITRDEEISN LNAEKLRSVRPAFKADGSITAPNAAPINDGAAALVLVSESKLKQLGLKPLARILGWADAEREPERFTTAPALAIP KAIRHAGLAASDIDFYEINEAFSVVALANIKLLNLDKEKVNVFGGSVALGHPLGCSGARILSTLTSVLKHKAAKY GCAGICNGGGGASALVIENLQ* |
Coding | >Ophcf2|02638 ATGTCTGGTCTACCGCCCGTCTACATCGTGTCCGTCGCCAGGACTCCCATTGGGTCTTTCCTTGGGTCGCTGTCC GGGCTCAGTGCTACGCAGCTGGGCGCGGCTGCTATCAAGGCTGCCGTTGAACGTGCTGGCGTCAAGCCAGACGAT GTCGAGGCCGTTTACATGGGCAACGTCCTGTCCGCAAACCTCGGCCAGGCCCCAGCCCGCCAGTGCTCTCTATCC GCCGGCCTCCCGCCCTCGACCGTCTGCACGGCCGTCAACAAGGTGTGCGCCTCGTCACTCAAAGCCGTCGTTCTA GCAGCGCAGGACATCATGCTGGGCACGGCATCCATCGTCGTCGCGGGCGGGACCGAGTCCATGTCTAACACGCCG CATTACCTCCCCAAGCTGCGCACCGGCGCGAAATACGGCGATCAGACGCTCGTTGATGGCGTTTTGGTCGATGGC CTTACTGATGCTTCGCTTGCTCAGCATATGGGACTGCAGGGCGAGCTTTGCGCCGTTGAGAACGGACACTCGCGT GCTGAGCAGGATGCATACGCCATTGAATCTTACACGCGTGCTCAGGCAGCTACAGAAGCAGGTCTCTTCACCGAA ATGACGCCCATCGACGTCCCCTCAGCGCGAGGCAAACCCCCCGTCCGCATAACCCGCGACGAGGAAATCAGCAAC CTCAACGCCGAGAAACTCCGCTCCGTCCGCCCAGCCTTCAAAGCAGACGGGTCCATCACAGCCCCCAACGCCGCC CCCATCAACGACGGCGCCGCCGCCCTCGTCCTCGTCTCGGAGTCCAAACTAAAGCAGCTCGGTCTCAAACCCCTC GCCCGTATCCTCGGCTGGGCCGACGCAGAGCGCGAACCGGAGCGCTTCACTACCGCGCCCGCCCTCGCCATCCCC AAGGCCATCCGTCACGCCGGACTCGCAGCCTCGGACATTGACTTTTACGAAATCAACGAGGCCTTCTCCGTCGTC GCCCTCGCAAACATCAAGTTGCTGAACCTCGACAAAGAAAAAGTCAACGTCTTTGGCGGGTCCGTCGCTCTGGGC CATCCGCTGGGCTGCTCCGGCGCTCGCATCCTCTCCACCTTGACTTCGGTCCTCAAGCACAAGGCCGCCAAGTAT GGCTGCGCCGGTATCTGCAATGGTGGAGGCGGCGCCTCGGCTCTCGTTATTGAGAATTTGCAATGA |
Transcript | >Ophcf2|02638 ATGTCTGGTCTACCGCCCGTCTACATCGTGTCCGTCGCCAGGACTCCCATTGGGTCTTTCCTTGGGTCGCTGTCC GGGCTCAGTGCTACGCAGCTGGGCGCGGCTGCTATCAAGGCTGCCGTTGAACGTGCTGGCGTCAAGCCAGACGAT GTCGAGGCCGTTTACATGGGCAACGTCCTGTCCGCAAACCTCGGCCAGGCCCCAGCCCGCCAGTGCTCTCTATCC GCCGGCCTCCCGCCCTCGACCGTCTGCACGGCCGTCAACAAGGTGTGCGCCTCGTCACTCAAAGCCGTCGTTCTA GCAGCGCAGGACATCATGCTGGGCACGGCATCCATCGTCGTCGCGGGCGGGACCGAGTCCATGTCTAACACGCCG CATTACCTCCCCAAGCTGCGCACCGGCGCGAAATACGGCGATCAGACGCTCGTTGATGGCGTTTTGGTCGATGGC CTTACTGATGCTTCGCTTGCTCAGCATATGGGACTGCAGGGCGAGCTTTGCGCCGTTGAGAACGGACACTCGCGT GCTGAGCAGGATGCATACGCCATTGAATCTTACACGCGTGCTCAGGCAGCTACAGAAGCAGGTCTCTTCACCGAA ATGACGCCCATCGACGTCCCCTCAGCGCGAGGCAAACCCCCCGTCCGCATAACCCGCGACGAGGAAATCAGCAAC CTCAACGCCGAGAAACTCCGCTCCGTCCGCCCAGCCTTCAAAGCAGACGGGTCCATCACAGCCCCCAACGCCGCC CCCATCAACGACGGCGCCGCCGCCCTCGTCCTCGTCTCGGAGTCCAAACTAAAGCAGCTCGGTCTCAAACCCCTC GCCCGTATCCTCGGCTGGGCCGACGCAGAGCGCGAACCGGAGCGCTTCACTACCGCGCCCGCCCTCGCCATCCCC AAGGCCATCCGTCACGCCGGACTCGCAGCCTCGGACATTGACTTTTACGAAATCAACGAGGCCTTCTCCGTCGTC GCCCTCGCAAACATCAAGTTGCTGAACCTCGACAAAGAAAAAGTCAACGTCTTTGGCGGGTCCGTCGCTCTGGGC CATCCGCTGGGCTGCTCCGGCGCTCGCATCCTCTCCACCTTGACTTCGGTCCTCAAGCACAAGGCCGCCAAGTAT GGCTGCGCCGGTATCTGCAATGGTGGAGGCGGCGCCTCGGCTCTCGTTATTGAGAATTTGCAATGA |
Gene | >Ophcf2|02638 ATGTCTGGTCTACCGCCCGTCTACATCGTGTCCGTCGCCAGGACTCCCATTGGGTCTTTCCTTGGGTTTGTCGTC TCCGCCTTGAAAGGGGGGGGTTTTATCTGGATAGCTGATGGATGGGATTTCTGCAAAAAGGTCGCTGTCCGGGCT CAGTGCTACGCAGCTGGGCGCGGCTGCTATCAAGGGTAAGCTCTTGGGTGGGGGAAAGGGAGAGAAGTTGATGAC GACTCTGACGTCGATCAGCTGCCGTTGAACGTGCTGGCGTCAAGCCAGACGATGTCGAGGCCGTTTACATGGGCA ACGTCCTGTCCGCAAAGTCAGCTCTCCTCTCCGACTTGGACTTCCAGCAGCGAGCTAAAGACGCGACAGCCTCGG CCAGGCCCCAGCCCGCCAGTGCTCTCTATCCGCCGGCCTCCCGCCCTCGACCGTCTGCACGGCCGTCAACAAGGT GTGCGCCTCGTCACTCAAAGCCGTCGTTCTAGCAGCGCAGGACATCATGCTGGGCACGGCATCCATCGTCGTCGC GGGCGGGACCGAGTCCATGTCTAACACGCCGCATTACCTCCCCAAGCTGCGCACCGGCGCGAAATACGGCGATCA GACGCTCGTTGATGGCGTTTTGGTCGATGGCCTTACTGATGCTTCGCTTGCTCAGCATATGGGACTGCAGGGCGA GCTTTGCGCCGTTGAGAACGGACACTCGCGTGCTGAGCAGGATGCATACGCCATTGAATCTTACACGCGTGCTCA GGCAGCTACAGAAGCAGGTCTCTTCACCGAAATGACGCCCATCGACGTCCCCTCAGCGCGAGGCAAACCCCCCGT CCGCATAACCCGCGACGAGGAAATCAGCAACCTCAACGCCGAGAAACTCCGCTCCGTCCGCCCAGCCTTCAAAGC AGACGGGTCCATCACAGCCCCCAACGCCGCCCCCATCAACGACGGCGCCGCCGCCCTCGTCCTCGTCTCGGAGTC CAAACTAAAGCAGCTCGGTCTCAAACCCCTCGCCCGTATCCTCGGCTGGGCCGACGCAGAGCGCGAACCGGAGCG CTTCACTACCGCGCCCGCCCTCGCCATCCCCAAGGCCATCCGTCACGCCGGACTCGCAGCCTCGGACATTGACTT TTACGAAATCAACGAGGCCTTCTCCGTCGTCGCCCTCGCAAACATCAAGTTGCTGAACCTCGACAAAGAAAAAGT CAACGTCTTTGGCGGGTCCGTCGCTCTGGGCCATCCGCTGGGCTGCTCCGGCGCTCGCATCCTCTCCACCTTGAC TTCGGTCCTCAAGCACAAGGCCGCCAAGTATGGCTGCGCCGGTATCTGCAATGGTGGAGGCGGCGCCTCGGCTCT CGTTATTGAGAATTTGCAATGA |