Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02610
Gene name
Locationscaffold_02:4192886..4193963
Strand+
Gene length (bp)1077
Transcript length (bp)972
Coding sequence length (bp)972
Protein length (aa) 324

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10176 DUF2370 Protein of unknown function (DUF2370) 1.4E-89 101 306

GO

GO Term Description Terminal node
GO:0030001 metal ion transport Yes
GO:0007034 vacuolar transport Yes
GO:0051641 cellular localization No
GO:0051179 localization No
GO:0006812 cation transport No
GO:0046907 intracellular transport No
GO:0008150 biological_process No
GO:0051649 establishment of localization in cell No
GO:0006810 transport No
GO:0006811 ion transport No
GO:0009987 cellular process No
GO:0051234 establishment of localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 69 0.45

Transmembrane Domains

Domain # Start End Length
1 176 198 22
2 262 284 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02610
MAGQYERVNDHDVEDPVDRSRNHVPSSPPPSFHSRSSSPSRRGSVDPALADAFDAEDGSDDEDDADDRQRLVRQN
STHVPSDSPPHTPATAGEPEPASSGSRPRYVGGGVGTDGVFANLSARPERSETEKEEQPPTYEQAAADAAPPYWE
TTILAPGFGGPDEVYVDGMPVGSVFSFIWNGMISTSFQLVGFLLTYLLHSTHAAKNGSRAGLGITLIQYGFYMKG
TTEGDPPAMNGPDGYAMPPDPNSHDFQPGSVAEGGETVTMTGGEWMSYVLMVVGWFILIKSVAEYLRARRHEQLV
MQSPDRGLGIPIIAEGEASEHVV*
Coding >Ophcf2|02610
ATGGCTGGGCAGTACGAGCGGGTCAACGACCACGACGTCGAAGACCCGGTCGACCGATCCCGTAACCACGTCCCC
AGCTCGCCGCCTCCGTCATTTCACTCGCGATCTTCGTCGCCGAGTCGCCGCGGCTCCGTCGACCCCGCGCTCGCC
GACGCGTTCGATGCCGAAGACGGCAGCGATGACGAAGACGATGCCGACGATAGGCAGCGGCTAGTGCGACAAAAC
TCTACGCATGTGCCGTCCGACTCGCCGCCGCATACGCCTGCCACTGCCGGAGAGCCGGAGCCGGCCTCGTCAGGC
TCCCGTCCGAGATACGTCGGCGGCGGAGTCGGCACGGATGGTGTCTTCGCGAATCTATCGGCACGGCCGGAGCGC
TCGGAAACGGAGAAGGAAGAGCAGCCTCCGACTTACGAGCAGGCAGCCGCCGACGCGGCACCGCCATATTGGGAG
ACGACGATTTTGGCGCCGGGCTTTGGCGGCCCAGACGAGGTGTACGTGGATGGCATGCCCGTCGGCTCCGTCTTC
TCTTTCATCTGGAACGGCATGATCTCGACGTCGTTCCAACTCGTCGGCTTCCTCTTGACGTATCTACTGCACTCG
ACGCACGCGGCCAAGAACGGTTCGCGTGCGGGGCTCGGCATCACCCTGATCCAATATGGCTTCTATATGAAGGGC
ACGACCGAGGGCGACCCGCCTGCGATGAACGGTCCAGATGGCTATGCGATGCCGCCGGACCCAAATTCTCACGAC
TTCCAGCCCGGCTCGGTGGCCGAAGGCGGGGAAACGGTGACCATGACGGGCGGAGAGTGGATGTCGTACGTGTTG
ATGGTGGTCGGGTGGTTCATCCTCATCAAGAGCGTGGCAGAATACCTGCGGGCTCGGCGGCACGAGCAGCTGGTC
ATGCAGAGCCCGGATCGTGGACTGGGCATACCCATCATTGCCGAGGGTGAGGCATCGGAGCATGTGGTATAA
Transcript >Ophcf2|02610
ATGGCTGGGCAGTACGAGCGGGTCAACGACCACGACGTCGAAGACCCGGTCGACCGATCCCGTAACCACGTCCCC
AGCTCGCCGCCTCCGTCATTTCACTCGCGATCTTCGTCGCCGAGTCGCCGCGGCTCCGTCGACCCCGCGCTCGCC
GACGCGTTCGATGCCGAAGACGGCAGCGATGACGAAGACGATGCCGACGATAGGCAGCGGCTAGTGCGACAAAAC
TCTACGCATGTGCCGTCCGACTCGCCGCCGCATACGCCTGCCACTGCCGGAGAGCCGGAGCCGGCCTCGTCAGGC
TCCCGTCCGAGATACGTCGGCGGCGGAGTCGGCACGGATGGTGTCTTCGCGAATCTATCGGCACGGCCGGAGCGC
TCGGAAACGGAGAAGGAAGAGCAGCCTCCGACTTACGAGCAGGCAGCCGCCGACGCGGCACCGCCATATTGGGAG
ACGACGATTTTGGCGCCGGGCTTTGGCGGCCCAGACGAGGTGTACGTGGATGGCATGCCCGTCGGCTCCGTCTTC
TCTTTCATCTGGAACGGCATGATCTCGACGTCGTTCCAACTCGTCGGCTTCCTCTTGACGTATCTACTGCACTCG
ACGCACGCGGCCAAGAACGGTTCGCGTGCGGGGCTCGGCATCACCCTGATCCAATATGGCTTCTATATGAAGGGC
ACGACCGAGGGCGACCCGCCTGCGATGAACGGTCCAGATGGCTATGCGATGCCGCCGGACCCAAATTCTCACGAC
TTCCAGCCCGGCTCGGTGGCCGAAGGCGGGGAAACGGTGACCATGACGGGCGGAGAGTGGATGTCGTACGTGTTG
ATGGTGGTCGGGTGGTTCATCCTCATCAAGAGCGTGGCAGAATACCTGCGGGCTCGGCGGCACGAGCAGCTGGTC
ATGCAGAGCCCGGATCGTGGACTGGGCATACCCATCATTGCCGAGGGTGAGGCATCGGAGCATGTGGTATAA
Gene >Ophcf2|02610
ATGGCTGGGCAGTACGAGCGGGTTTGTGGCGTCACCGGTCTGTCATTGTTGATGAGGTGCTGACAATTAGCAGGT
CAACGACCACGACGTCGAAGACCCGGTCGACCGATCCCGTAACCACGTCCCCAGCTCGCCGCCTCCGTCATTTCA
CTCGCGATCTTCGTCGCCGAGTCGCCGCGGCTCCGTCGACCCCGCGCTCGCCGACGCGTTCGATGCCGAAGACGG
CAGCGATGACGAAGACGATGCCGACGATAGGCAGCGGCTAGTGCGACAAAACTCTACGCATGTGCCGTCCGACTC
GCCGCCGCATACGCCTGCCACTGCCGGAGAGCCGGAGCCGGCCTCGTCAGGCTCCCGTCCGAGATACGTCGGCGG
CGGAGTCGGCACGGATGGTGTCTTCGCGAATCTATCGGCACGGCCGGAGCGCTCGGAAACGGAGAAGGAAGAGCA
GCCTCCGGTGAGCAGTTCCGTCGCCGATTGTTGTTCTGAAACACTGACGCTGTCGGGTAGACTTACGAGCAGGCA
GCCGCCGACGCGGCACCGCCATATTGGGAGACGACGATTTTGGCGCCGGGCTTTGGCGGCCCAGACGAGGTGTAC
GTGGATGGCATGCCCGTCGGCTCCGTCTTCTCTTTCATCTGGAACGGCATGATCTCGACGTCGTTCCAACTCGTC
GGCTTCCTCTTGACGTATCTACTGCACTCGACGCACGCGGCCAAGAACGGTTCGCGTGCGGGGCTCGGCATCACC
CTGATCCAATATGGCTTCTATATGAAGGGCACGACCGAGGGCGACCCGCCTGCGATGAACGGTCCAGATGGCTAT
GCGATGCCGCCGGACCCAAATTCTCACGACTTCCAGCCCGGCTCGGTGGCCGAAGGCGGGGAAACGGTGACCATG
ACGGGCGGAGAGTGGATGTCGTACGTGTTGATGGTGGTCGGGTGGTTCATCCTCATCAAGAGCGTGGCAGAATAC
CTGCGGGCTCGGCGGCACGAGCAGCTGGTCATGCAGAGCCCGGATCGTGGACTGGGCATACCCATCATTGCCGAG
GGTGAGGCATCGGAGCATGTGGTATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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