Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02596
Gene name
Locationscaffold_02:4164286..4165897
Strand+
Gene length (bp)1611
Transcript length (bp)1611
Coding sequence length (bp)1611
Protein length (aa) 537

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07766 LETM1_RBD LETM1-like, RBD 3.9E-87 184 413

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.45

Transmembrane Domains

Domain # Start End Length
1 199 221 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02596
MSASSAVVRTAAARNPLLVGSALPRAFAPGWLARRDARIPALAVFFRSMATEHHGPDHQTTTSTTAPPPGFSVER
AKKPLARDDDGLTATKQPQSQLQQQKQAAAQKQAGATKTEAAVLQLAAEKGDAAEKQELAKTDQEDKKLTLWQKV
KREAHHYWDGTKLLAAEVRISWKLALKMAAGYDLSRRENKQLQRTVRDLGRLVPFSVFIIVPLGEALLPLALKLF
PNMLPSTFEGQKSKDAKASLLRSTRNEVSAFLKQTLKETGLPLSAATAHKEEFANFFRKVRSTGETPTRQDVIRV
CKVFRDDVTLDNLSRPQLVSMCRYMNLNTFGTDMMLRYQVRHRMRQIKRDDKAISFEGIDSLTVSELQTACAARG
IRTHSVSPARMRTDLQTWLDLRLKEGVPSTLLVLSNAYMYGQGSDSEWNQVDALIGVLSSIPEELFHEMELEVHN
AEGAATNKQRLEVLKEQEDLIEDENEQNEESQSTGMATPRDVEDIDEKEERQISARAAGLEKTPAAEMVDAERET
AARNNKRGKTE*
Coding >Ophcf2|02596
ATGAGTGCCTCGTCTGCGGTTGTCCGCACGGCGGCGGCTCGCAACCCGCTGCTGGTGGGAAGCGCCCTTCCGCGA
GCCTTTGCGCCTGGCTGGCTGGCCCGCCGCGATGCTCGAATCCCGGCGCTGGCCGTATTTTTCCGTTCCATGGCT
ACCGAGCATCACGGGCCGGATCACCAGACGACGACGTCGACGACGGCGCCTCCGCCCGGCTTCAGTGTTGAGCGT
GCTAAGAAGCCGCTGGCTCGGGACGACGACGGCTTGACTGCGACCAAGCAGCCTCAGTCTCAGCTTCAGCAGCAG
AAGCAGGCGGCTGCACAAAAACAAGCCGGCGCGACAAAGACCGAGGCAGCCGTTCTGCAGCTGGCTGCGGAAAAG
GGCGACGCGGCAGAGAAGCAGGAGCTCGCCAAAACCGACCAGGAAGACAAGAAGCTCACGTTGTGGCAAAAAGTC
AAGAGGGAGGCGCACCACTACTGGGACGGCACCAAGCTGCTCGCCGCCGAGGTCCGAATCAGCTGGAAGCTGGCG
CTCAAGATGGCGGCCGGCTACGATCTCTCGCGCAGAGAAAACAAGCAGCTGCAGCGGACGGTGCGGGATCTCGGC
CGGCTGGTGCCGTTTTCCGTCTTCATCATCGTGCCCCTAGGCGAGGCTCTACTACCGCTCGCCCTCAAGCTCTTC
CCCAATATGCTGCCCAGCACGTTCGAGGGTCAAAAGTCAAAGGACGCAAAGGCCAGCCTGCTACGGTCTACGCGC
AACGAGGTCAGCGCCTTCCTCAAGCAGACGCTCAAGGAGACGGGTCTGCCGCTGAGCGCGGCCACGGCGCACAAG
GAGGAGTTTGCCAACTTCTTCCGCAAGGTGCGCTCGACGGGCGAGACGCCGACGCGGCAGGACGTGATCCGGGTC
TGCAAGGTGTTCCGCGATGACGTGACTCTCGACAACTTGTCGCGGCCGCAGCTCGTGTCCATGTGCAGGTACATG
AACCTCAACACGTTTGGGACCGACATGATGCTGCGCTACCAGGTGCGGCACCGGATGCGGCAGATCAAGCGCGAC
GACAAGGCCATAAGCTTCGAGGGCATCGACAGCCTGACCGTGTCGGAGCTGCAGACGGCGTGCGCGGCCCGAGGC
ATCCGCACTCACAGCGTGTCCCCGGCCCGGATGCGGACCGACCTGCAGACGTGGCTGGACCTGCGACTGAAGGAG
GGCGTGCCGTCGACGCTGCTGGTGCTCAGCAACGCCTACATGTACGGCCAGGGCTCCGACTCGGAGTGGAACCAG
GTGGACGCCCTCATCGGCGTGCTGTCGTCCATCCCCGAGGAGCTCTTCCACGAGATGGAGCTCGAGGTGCACAAC
GCCGAGGGCGCGGCCACCAACAAGCAGCGGCTCGAGGTTCTCAAGGAGCAGGAGGACCTGATCGAGGACGAGAAC
GAGCAGAACGAGGAGAGCCAGAGCACGGGCATGGCGACGCCGCGTGACGTCGAAGACATTGACGAGAAGGAGGAG
CGTCAGATATCGGCGCGGGCGGCGGGACTGGAGAAGACGCCTGCAGCTGAGATGGTTGACGCCGAGCGGGAGACG
GCGGCCCGGAACAATAAAAGGGGGAAGACGGAGTGA
Transcript >Ophcf2|02596
ATGAGTGCCTCGTCTGCGGTTGTCCGCACGGCGGCGGCTCGCAACCCGCTGCTGGTGGGAAGCGCCCTTCCGCGA
GCCTTTGCGCCTGGCTGGCTGGCCCGCCGCGATGCTCGAATCCCGGCGCTGGCCGTATTTTTCCGTTCCATGGCT
ACCGAGCATCACGGGCCGGATCACCAGACGACGACGTCGACGACGGCGCCTCCGCCCGGCTTCAGTGTTGAGCGT
GCTAAGAAGCCGCTGGCTCGGGACGACGACGGCTTGACTGCGACCAAGCAGCCTCAGTCTCAGCTTCAGCAGCAG
AAGCAGGCGGCTGCACAAAAACAAGCCGGCGCGACAAAGACCGAGGCAGCCGTTCTGCAGCTGGCTGCGGAAAAG
GGCGACGCGGCAGAGAAGCAGGAGCTCGCCAAAACCGACCAGGAAGACAAGAAGCTCACGTTGTGGCAAAAAGTC
AAGAGGGAGGCGCACCACTACTGGGACGGCACCAAGCTGCTCGCCGCCGAGGTCCGAATCAGCTGGAAGCTGGCG
CTCAAGATGGCGGCCGGCTACGATCTCTCGCGCAGAGAAAACAAGCAGCTGCAGCGGACGGTGCGGGATCTCGGC
CGGCTGGTGCCGTTTTCCGTCTTCATCATCGTGCCCCTAGGCGAGGCTCTACTACCGCTCGCCCTCAAGCTCTTC
CCCAATATGCTGCCCAGCACGTTCGAGGGTCAAAAGTCAAAGGACGCAAAGGCCAGCCTGCTACGGTCTACGCGC
AACGAGGTCAGCGCCTTCCTCAAGCAGACGCTCAAGGAGACGGGTCTGCCGCTGAGCGCGGCCACGGCGCACAAG
GAGGAGTTTGCCAACTTCTTCCGCAAGGTGCGCTCGACGGGCGAGACGCCGACGCGGCAGGACGTGATCCGGGTC
TGCAAGGTGTTCCGCGATGACGTGACTCTCGACAACTTGTCGCGGCCGCAGCTCGTGTCCATGTGCAGGTACATG
AACCTCAACACGTTTGGGACCGACATGATGCTGCGCTACCAGGTGCGGCACCGGATGCGGCAGATCAAGCGCGAC
GACAAGGCCATAAGCTTCGAGGGCATCGACAGCCTGACCGTGTCGGAGCTGCAGACGGCGTGCGCGGCCCGAGGC
ATCCGCACTCACAGCGTGTCCCCGGCCCGGATGCGGACCGACCTGCAGACGTGGCTGGACCTGCGACTGAAGGAG
GGCGTGCCGTCGACGCTGCTGGTGCTCAGCAACGCCTACATGTACGGCCAGGGCTCCGACTCGGAGTGGAACCAG
GTGGACGCCCTCATCGGCGTGCTGTCGTCCATCCCCGAGGAGCTCTTCCACGAGATGGAGCTCGAGGTGCACAAC
GCCGAGGGCGCGGCCACCAACAAGCAGCGGCTCGAGGTTCTCAAGGAGCAGGAGGACCTGATCGAGGACGAGAAC
GAGCAGAACGAGGAGAGCCAGAGCACGGGCATGGCGACGCCGCGTGACGTCGAAGACATTGACGAGAAGGAGGAG
CGTCAGATATCGGCGCGGGCGGCGGGACTGGAGAAGACGCCTGCAGCTGAGATGGTTGACGCCGAGCGGGAGACG
GCGGCCCGGAACAATAAAAGGGGGAAGACGGAGTGA
Gene >Ophcf2|02596
ATGAGTGCCTCGTCTGCGGTTGTCCGCACGGCGGCGGCTCGCAACCCGCTGCTGGTGGGAAGCGCCCTTCCGCGA
GCCTTTGCGCCTGGCTGGCTGGCCCGCCGCGATGCTCGAATCCCGGCGCTGGCCGTATTTTTCCGTTCCATGGCT
ACCGAGCATCACGGGCCGGATCACCAGACGACGACGTCGACGACGGCGCCTCCGCCCGGCTTCAGTGTTGAGCGT
GCTAAGAAGCCGCTGGCTCGGGACGACGACGGCTTGACTGCGACCAAGCAGCCTCAGTCTCAGCTTCAGCAGCAG
AAGCAGGCGGCTGCACAAAAACAAGCCGGCGCGACAAAGACCGAGGCAGCCGTTCTGCAGCTGGCTGCGGAAAAG
GGCGACGCGGCAGAGAAGCAGGAGCTCGCCAAAACCGACCAGGAAGACAAGAAGCTCACGTTGTGGCAAAAAGTC
AAGAGGGAGGCGCACCACTACTGGGACGGCACCAAGCTGCTCGCCGCCGAGGTCCGAATCAGCTGGAAGCTGGCG
CTCAAGATGGCGGCCGGCTACGATCTCTCGCGCAGAGAAAACAAGCAGCTGCAGCGGACGGTGCGGGATCTCGGC
CGGCTGGTGCCGTTTTCCGTCTTCATCATCGTGCCCCTAGGCGAGGCTCTACTACCGCTCGCCCTCAAGCTCTTC
CCCAATATGCTGCCCAGCACGTTCGAGGGTCAAAAGTCAAAGGACGCAAAGGCCAGCCTGCTACGGTCTACGCGC
AACGAGGTCAGCGCCTTCCTCAAGCAGACGCTCAAGGAGACGGGTCTGCCGCTGAGCGCGGCCACGGCGCACAAG
GAGGAGTTTGCCAACTTCTTCCGCAAGGTGCGCTCGACGGGCGAGACGCCGACGCGGCAGGACGTGATCCGGGTC
TGCAAGGTGTTCCGCGATGACGTGACTCTCGACAACTTGTCGCGGCCGCAGCTCGTGTCCATGTGCAGGTACATG
AACCTCAACACGTTTGGGACCGACATGATGCTGCGCTACCAGGTGCGGCACCGGATGCGGCAGATCAAGCGCGAC
GACAAGGCCATAAGCTTCGAGGGCATCGACAGCCTGACCGTGTCGGAGCTGCAGACGGCGTGCGCGGCCCGAGGC
ATCCGCACTCACAGCGTGTCCCCGGCCCGGATGCGGACCGACCTGCAGACGTGGCTGGACCTGCGACTGAAGGAG
GGCGTGCCGTCGACGCTGCTGGTGCTCAGCAACGCCTACATGTACGGCCAGGGCTCCGACTCGGAGTGGAACCAG
GTGGACGCCCTCATCGGCGTGCTGTCGTCCATCCCCGAGGAGCTCTTCCACGAGATGGAGCTCGAGGTGCACAAC
GCCGAGGGCGCGGCCACCAACAAGCAGCGGCTCGAGGTTCTCAAGGAGCAGGAGGACCTGATCGAGGACGAGAAC
GAGCAGAACGAGGAGAGCCAGAGCACGGGCATGGCGACGCCGCGTGACGTCGAAGACATTGACGAGAAGGAGGAG
CGTCAGATATCGGCGCGGGCGGCGGGACTGGAGAAGACGCCTGCAGCTGAGATGGTTGACGCCGAGCGGGAGACG
GCGGCCCGGAACAATAAAAGGGGGAAGACGGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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