Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02595
Gene name
Locationscaffold_02:4161380..4162889
Strand-
Gene length (bp)1509
Transcript length (bp)1317
Coding sequence length (bp)1317
Protein length (aa) 439

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 1.6E-18 53 324

GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0051179 localization No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0005215 transporter activity No
GO:0051234 establishment of localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 41 0.5

Transmembrane Domains

Domain # Start End Length
1 46 68 22
2 83 102 19
3 109 131 22
4 136 158 22
5 171 193 22
6 203 225 22
7 245 267 22
8 277 299 22
9 306 328 22
10 332 354 22
11 367 389 22
12 409 426 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02595
MATKDEDVSSSSISPATPTEEALSAEPKDQEAAVPEQQLVDGPRGWIVVAAASCSLFCYMGCIYSWGIVQVQISQ
TTSMTLPSLTFVGSLGTSFMASISPFVGKAIRRFGYRNTALAGAFLLGLGEMLSSWVTYSLPALLITHGCLFGIG
GGMTILPLSTAPLKWFKKHRGLAVGVVFGGSSLGAAMVGVATNFLVRSVGVPWTFRILGLILWSVCLPAAFFIGP
PSSKDLIPRLQWHRWTEPDFLLLFTAGAISCFPVFVPPYFIPVFARSISHSSSTGIIALTIWNMSSTVGRVVAGL
MADSFLGPINSLCLAIFLCSISALAVWPFASSIGILSLFTVISGTGCGAFFSLFPTVVSAVFGPENTLGVLPMLW
AGWFFGYFFGTPIASRLYALAAVDADTSEYRPAAFYAGATSFIGLVFLIALRYRRNSVLLARV*
Coding >Ophcf2|02595
ATGGCGACAAAGGACGAAGACGTCTCCTCCTCCTCCATCTCGCCCGCTACGCCTACGGAAGAGGCTCTCAGTGCC
GAGCCAAAGGATCAGGAAGCGGCAGTTCCTGAACAGCAGCTAGTCGACGGGCCTCGGGGCTGGATCGTCGTTGCT
GCCGCCTCGTGCTCGCTCTTCTGTTACATGGGCTGCATCTACTCATGGGGCATCGTGCAGGTCCAGATATCGCAG
ACGACTTCCATGACGCTGCCCTCTCTGACTTTTGTCGGCTCGCTCGGCACCTCCTTCATGGCTTCTATAAGCCCC
TTTGTCGGAAAGGCCATCCGTCGGTTCGGCTACCGTAACACTGCTCTGGCCGGCGCCTTTCTTCTCGGTCTGGGC
GAGATGTTGTCCAGCTGGGTGACTTACAGTCTTCCCGCTCTGCTCATCACCCACGGCTGCCTCTTCGGCATCGGT
GGAGGAATGACCATATTGCCTCTGTCTACCGCGCCACTCAAATGGTTCAAGAAACATCGTGGCCTCGCCGTCGGC
GTCGTCTTCGGCGGCAGCAGTCTGGGTGCTGCCATGGTCGGAGTGGCCACCAACTTCCTCGTCCGCAGCGTCGGC
GTGCCCTGGACCTTTCGCATCTTGGGCCTCATCCTGTGGAGTGTCTGTCTTCCGGCTGCCTTCTTCATCGGGCCC
CCTTCGTCCAAGGACTTGATCCCCCGGCTTCAGTGGCACCGCTGGACCGAGCCGGATTTCCTCCTGCTTTTCACC
GCGGGAGCCATCTCGTGCTTCCCGGTCTTCGTGCCGCCCTATTTCATCCCCGTCTTTGCCCGGTCCATCAGCCAT
TCGAGCTCGACCGGCATCATCGCCCTCACCATATGGAATATGTCGTCCACCGTCGGCCGCGTCGTCGCCGGCCTC
ATGGCTGACTCTTTCCTCGGGCCCATCAACAGCCTCTGTCTGGCCATCTTTCTCTGCAGCATCAGTGCCCTGGCC
GTCTGGCCCTTTGCGTCCAGCATTGGCATCTTGTCGCTGTTTACCGTCATCAGTGGCACCGGTTGCGGCGCCTTC
TTCTCGCTTTTCCCGACTGTCGTCTCCGCCGTCTTCGGGCCGGAGAATACGTTGGGGGTGCTCCCTATGCTGTGG
GCTGGCTGGTTCTTTGGATACTTTTTCGGGACGCCCATAGCTTCACGCCTCTACGCGCTGGCGGCCGTTGACGCC
GACACGAGCGAGTACCGTCCGGCTGCCTTTTACGCGGGAGCCACGTCCTTTATCGGCCTCGTCTTTCTCATCGCC
CTACGTTACCGTCGCAACAGCGTCTTGCTCGCCCGAGTCTAG
Transcript >Ophcf2|02595
ATGGCGACAAAGGACGAAGACGTCTCCTCCTCCTCCATCTCGCCCGCTACGCCTACGGAAGAGGCTCTCAGTGCC
GAGCCAAAGGATCAGGAAGCGGCAGTTCCTGAACAGCAGCTAGTCGACGGGCCTCGGGGCTGGATCGTCGTTGCT
GCCGCCTCGTGCTCGCTCTTCTGTTACATGGGCTGCATCTACTCATGGGGCATCGTGCAGGTCCAGATATCGCAG
ACGACTTCCATGACGCTGCCCTCTCTGACTTTTGTCGGCTCGCTCGGCACCTCCTTCATGGCTTCTATAAGCCCC
TTTGTCGGAAAGGCCATCCGTCGGTTCGGCTACCGTAACACTGCTCTGGCCGGCGCCTTTCTTCTCGGTCTGGGC
GAGATGTTGTCCAGCTGGGTGACTTACAGTCTTCCCGCTCTGCTCATCACCCACGGCTGCCTCTTCGGCATCGGT
GGAGGAATGACCATATTGCCTCTGTCTACCGCGCCACTCAAATGGTTCAAGAAACATCGTGGCCTCGCCGTCGGC
GTCGTCTTCGGCGGCAGCAGTCTGGGTGCTGCCATGGTCGGAGTGGCCACCAACTTCCTCGTCCGCAGCGTCGGC
GTGCCCTGGACCTTTCGCATCTTGGGCCTCATCCTGTGGAGTGTCTGTCTTCCGGCTGCCTTCTTCATCGGGCCC
CCTTCGTCCAAGGACTTGATCCCCCGGCTTCAGTGGCACCGCTGGACCGAGCCGGATTTCCTCCTGCTTTTCACC
GCGGGAGCCATCTCGTGCTTCCCGGTCTTCGTGCCGCCCTATTTCATCCCCGTCTTTGCCCGGTCCATCAGCCAT
TCGAGCTCGACCGGCATCATCGCCCTCACCATATGGAATATGTCGTCCACCGTCGGCCGCGTCGTCGCCGGCCTC
ATGGCTGACTCTTTCCTCGGGCCCATCAACAGCCTCTGTCTGGCCATCTTTCTCTGCAGCATCAGTGCCCTGGCC
GTCTGGCCCTTTGCGTCCAGCATTGGCATCTTGTCGCTGTTTACCGTCATCAGTGGCACCGGTTGCGGCGCCTTC
TTCTCGCTTTTCCCGACTGTCGTCTCCGCCGTCTTCGGGCCGGAGAATACGTTGGGGGTGCTCCCTATGCTGTGG
GCTGGCTGGTTCTTTGGATACTTTTTCGGGACGCCCATAGCTTCACGCCTCTACGCGCTGGCGGCCGTTGACGCC
GACACGAGCGAGTACCGTCCGGCTGCCTTTTACGCGGGAGCCACGTCCTTTATCGGCCTCGTCTTTCTCATCGCC
CTACGTTACCGTCGCAACAGCGTCTTGCTCGCCCGAGTCTAG
Gene >Ophcf2|02595
ATGGCGACAAAGGACGAAGACGTCTCCTCCTCCTCCATCTCGCCCGCTACGCCTACGGAAGAGGCTCTCAGTGCC
GAGCCAAAGGATCAGGAAGCGGCAGTTCCTGAACAGCAGCTAGTCGACGGGCCTCGGGGCTGGATCGTCGTTGCT
GCCGCCTCGTGCTCGCTCTTCTGTTACATGGGCTGCATCTACTCATGGGGCATCGTGCAGGTCCAGATATCGCAG
ACGACTTCCATGACGCTGCCCTCTCTGACTTTTGTCGGCTCGCTCGGCACCTCCTTCATGGCTTCTATAAGCCCC
TTTGTCGGAAAGGCCATCCGTCGGTTCGGCTACCGTAACACTGCTCTGGCCGGCGCCTTTCTTCTCGGTCTGGGC
GAGATGTTGTCCAGCTGGGTGACTTACAGTCTTCCCGCTCTGCTCATCACCCACGGCTGCCTCTTCGGCATCGGT
GGAGGAATGACCATATTGGTATGCTTCACGCTCAGATGAAAAGGGGATCGTGTGAGAAAGGGAAGCGTCTTTGTG
CTCATATATACATGATTCTTCTACAGCCTCTGTCTACCGCGCCACTCAAATGGTTCAAGAAACATCGTGGCCTCG
CCGTCGGCGTCGTCTTCGGCGGCAGCAGTCTGGGTGCTGCCATGGTCGGAGTGGCCACCAACTTCCTCGTCCGCA
GCGTCGGCGTGCCCTGGACCTTTCGCATCTTGGGCCTCATCCTGTGGAGTGTCTGTCTTCCGGCTGCCTTCTTCA
TCGGGCCCCCTTCGTCCAAGGACTTGATCCCCCGGCTTCAGTGGTGCGTGAAAGCTCTACCGCTAATCACAGCTG
CTCCTCTTACATGTAAACAGGCACCGCTGGACCGAGCCGGATTTCCTCCTGCTTTTCACCGCGGGAGCCATCTCG
TGCTTCCCGGTCTTCGTGCCGCCCTATTTCATCCCCGTCTTTGCCCGGTCCATCAGCCATTCGAGCTCGACCGGC
ATCATCGCCCTCACCATATGGAATATGTCGTCCACCGTCGGCCGCGTCGTCGCCGGCCTCATGGCTGACTCTTTC
CTCGGGCCCATCAACAGCCTCTGTCTGGCCATCTTTCTCTGCAGCATCAGTGCCCTGGCCGTCTGGCCCTTTGCG
TCCAGCATTGGCATCTTGTCGCTGTTTACCGTCATCAGTGGCACCGGTTGCGGCGCCTTCTTCTCGCTTTTCCCG
ACTGTCGTCTCCGCCGTCTTCGGGCCGGAGAATACGTTGGGGGTGCTCCCTATGCTGTGGGCTGGCTGGTTCTTT
GGATACTTTTTCGTGAGCCTCGTCTTGTCCTGCGTCGATACTTATCTGGCTTACAAGGAGTCTTTAAAGGGGACG
CCCATAGCTTCACGCCTCTACGCGCTGGCGGCCGTTGACGCCGACACGAGCGAGTACCGTCCGGCTGCCTTTTAC
GCGGGAGCCACGTCCTTTATCGGCCTCGTCTTTCTCATCGCCCTACGTTACCGTCGCAACAGCGTCTTGCTCGCC
CGAGTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail