© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|02577 |
| Gene name | |
| Location | scaffold_02:4127658..4128795 |
| Strand | + |
| Gene length (bp) | 1137 |
| Transcript length (bp) | 1089 |
| Coding sequence length (bp) | 1089 |
| Protein length (aa) | 363 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08240 | ADH_N | Alcohol dehydrogenase GroES-like domain | 6.9E-29 | 33 | 142 |
| PF00107 | ADH_zinc_N | Zinc-binding dehydrogenase | 6.6E-25 | 183 | 315 |
| PF16912 | Glu_dehyd_C | Glucose dehydrogenase C-terminus | 2.4E-13 | 152 | 348 |
| PF13602 | ADH_zinc_N_2 | Zinc-binding dehydrogenase | 5.3E-07 | 218 | 344 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|02577 MHSDQLSNLSLFLNAPLDLSFAELPKPEIKDDHQVLVAINFTGICGSDVHYWRDGAIGHFRLKDPMVLGHESVGT VLAAGAAVTSLKAGDRVALEPGFPCRRCSDCRAGNYNLCDDMKFAATPPYHGTLTGVYAAPADFCYRLPESVSLQ EGALIEPLAVSVHGVRQAQVTPGQSVAVLGAGPVGLLCAAVAKAFGASKVISVDVRSARLDLAREIAATHVYLAR DVSPQDNAAAIRELADLPRGVDVVIDASGAEASIQAGIHLLRMGGVYVQLGMGRDDCNFPIMALCLKEATVRGSF RYGPGDYDLAIQLVASGKVPVKKLISRVVAFDQAKEAFDLAAKGDLIKILIAGPNEDRGVAT* |
| Coding | >Ophcf2|02577 ATGCACTCGGATCAGCTGAGCAACCTCTCCCTCTTCCTCAACGCGCCCCTCGACCTCTCCTTCGCCGAGCTGCCC AAGCCCGAGATCAAAGATGATCACCAGGTTCTCGTGGCTATAAACTTCACCGGCATTTGCGGCTCTGACGTCCAT TACTGGCGTGATGGTGCCATCGGCCACTTCCGACTCAAAGACCCCATGGTTCTGGGTCACGAAAGCGTGGGAACG GTGCTTGCCGCTGGTGCTGCCGTCACGTCTCTGAAAGCGGGTGACCGCGTTGCTCTCGAACCTGGCTTTCCCTGC CGGCGATGCTCGGATTGTCGCGCTGGGAATTACAACCTCTGCGACGACATGAAGTTTGCGGCGACGCCTCCGTAT CACGGGACACTTACTGGCGTCTATGCAGCTCCAGCTGACTTTTGCTACCGTCTTCCGGAGTCCGTCTCGCTGCAG GAAGGGGCGCTGATCGAGCCGCTCGCCGTGTCCGTCCACGGCGTTCGCCAGGCCCAAGTCACGCCGGGCCAATCC GTGGCCGTACTGGGCGCCGGTCCTGTCGGCTTACTCTGTGCGGCCGTGGCCAAGGCTTTTGGGGCGTCCAAGGTG ATCAGCGTCGATGTCCGTTCCGCCCGACTGGATCTGGCCCGTGAGATTGCCGCGACGCACGTCTATCTCGCGCGC GACGTCAGCCCCCAAGATAACGCGGCTGCCATCCGCGAACTGGCTGATCTCCCAAGGGGTGTCGACGTTGTCATT GATGCGAGCGGCGCCGAGGCATCCATTCAGGCAGGCATCCATCTGCTCAGGATGGGAGGCGTGTACGTGCAGTTG GGCATGGGCCGCGACGACTGCAACTTTCCCATCATGGCTTTGTGCCTCAAAGAAGCCACTGTCCGCGGCTCATTC CGTTACGGCCCGGGAGACTACGATCTGGCCATCCAGCTCGTTGCCAGCGGAAAAGTGCCCGTCAAGAAGCTCATC TCGCGCGTCGTAGCCTTTGACCAGGCCAAGGAAGCCTTTGACTTGGCTGCCAAGGGCGACCTTATCAAGATTCTC ATTGCAGGGCCCAACGAGGATCGAGGCGTGGCCACGTGA |
| Transcript | >Ophcf2|02577 ATGCACTCGGATCAGCTGAGCAACCTCTCCCTCTTCCTCAACGCGCCCCTCGACCTCTCCTTCGCCGAGCTGCCC AAGCCCGAGATCAAAGATGATCACCAGGTTCTCGTGGCTATAAACTTCACCGGCATTTGCGGCTCTGACGTCCAT TACTGGCGTGATGGTGCCATCGGCCACTTCCGACTCAAAGACCCCATGGTTCTGGGTCACGAAAGCGTGGGAACG GTGCTTGCCGCTGGTGCTGCCGTCACGTCTCTGAAAGCGGGTGACCGCGTTGCTCTCGAACCTGGCTTTCCCTGC CGGCGATGCTCGGATTGTCGCGCTGGGAATTACAACCTCTGCGACGACATGAAGTTTGCGGCGACGCCTCCGTAT CACGGGACACTTACTGGCGTCTATGCAGCTCCAGCTGACTTTTGCTACCGTCTTCCGGAGTCCGTCTCGCTGCAG GAAGGGGCGCTGATCGAGCCGCTCGCCGTGTCCGTCCACGGCGTTCGCCAGGCCCAAGTCACGCCGGGCCAATCC GTGGCCGTACTGGGCGCCGGTCCTGTCGGCTTACTCTGTGCGGCCGTGGCCAAGGCTTTTGGGGCGTCCAAGGTG ATCAGCGTCGATGTCCGTTCCGCCCGACTGGATCTGGCCCGTGAGATTGCCGCGACGCACGTCTATCTCGCGCGC GACGTCAGCCCCCAAGATAACGCGGCTGCCATCCGCGAACTGGCTGATCTCCCAAGGGGTGTCGACGTTGTCATT GATGCGAGCGGCGCCGAGGCATCCATTCAGGCAGGCATCCATCTGCTCAGGATGGGAGGCGTGTACGTGCAGTTG GGCATGGGCCGCGACGACTGCAACTTTCCCATCATGGCTTTGTGCCTCAAAGAAGCCACTGTCCGCGGCTCATTC CGTTACGGCCCGGGAGACTACGATCTGGCCATCCAGCTCGTTGCCAGCGGAAAAGTGCCCGTCAAGAAGCTCATC TCGCGCGTCGTAGCCTTTGACCAGGCCAAGGAAGCCTTTGACTTGGCTGCCAAGGGCGACCTTATCAAGATTCTC ATTGCAGGGCCCAACGAGGATCGAGGCGTGGCCACGTGA |
| Gene | >Ophcf2|02577 ATGCACTCGGATCAGCTGAGCGTACGCTGGCCTCGGAAGCAGCTCTGTCACGACAGCTAACCGCCTCAGAACCTC TCCCTCTTCCTCAACGCGCCCCTCGACCTCTCCTTCGCCGAGCTGCCCAAGCCCGAGATCAAAGATGATCACCAG GTTCTCGTGGCTATAAACTTCACCGGCATTTGCGGCTCTGACGTCCATTACTGGCGTGATGGTGCCATCGGCCAC TTCCGACTCAAAGACCCCATGGTTCTGGGTCACGAAAGCGTGGGAACGGTGCTTGCCGCTGGTGCTGCCGTCACG TCTCTGAAAGCGGGTGACCGCGTTGCTCTCGAACCTGGCTTTCCCTGCCGGCGATGCTCGGATTGTCGCGCTGGG AATTACAACCTCTGCGACGACATGAAGTTTGCGGCGACGCCTCCGTATCACGGGACACTTACTGGCGTCTATGCA GCTCCAGCTGACTTTTGCTACCGTCTTCCGGAGTCCGTCTCGCTGCAGGAAGGGGCGCTGATCGAGCCGCTCGCC GTGTCCGTCCACGGCGTTCGCCAGGCCCAAGTCACGCCGGGCCAATCCGTGGCCGTACTGGGCGCCGGTCCTGTC GGCTTACTCTGTGCGGCCGTGGCCAAGGCTTTTGGGGCGTCCAAGGTGATCAGCGTCGATGTCCGTTCCGCCCGA CTGGATCTGGCCCGTGAGATTGCCGCGACGCACGTCTATCTCGCGCGCGACGTCAGCCCCCAAGATAACGCGGCT GCCATCCGCGAACTGGCTGATCTCCCAAGGGGTGTCGACGTTGTCATTGATGCGAGCGGCGCCGAGGCATCCATT CAGGCAGGCATCCATCTGCTCAGGATGGGAGGCGTGTACGTGCAGTTGGGCATGGGCCGCGACGACTGCAACTTT CCCATCATGGCTTTGTGCCTCAAAGAAGCCACTGTCCGCGGCTCATTCCGTTACGGCCCGGGAGACTACGATCTG GCCATCCAGCTCGTTGCCAGCGGAAAAGTGCCCGTCAAGAAGCTCATCTCGCGCGTCGTAGCCTTTGACCAGGCC AAGGAAGCCTTTGACTTGGCTGCCAAGGGCGACCTTATCAAGATTCTCATTGCAGGGCCCAACGAGGATCGAGGC GTGGCCACGTGA |