Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02534
Gene name
Locationscaffold_02:4019120..4021558
Strand+
Gene length (bp)2438
Transcript length (bp)1338
Coding sequence length (bp)1338
Protein length (aa) 446

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08659 KR KR domain 1.4E-07 5 121

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 281 303 22
2 318 340 22
3 353 375 22
4 398 420 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02534
MSPSTILITGANGSLALAAVSHLLKHAPSQTLLLTVRNAAVDDVNTQALRRLVARRQEGVYIRELDLSRLERVRD
FAREVEADIARGRLPPLASIVCNAYYWNLVGPVEMTVDGFEKSMQVSHLSHAALVMRLIRSCGAPTARILLLSSA
VHRPGRGAPFEKLPPSIPSPLELLVRPEPDADDDRAAHGFQRFMVSQVYTDACFDVKDPSLKHISVVIVNPGVLS
DSRALLVNTPRTICLTSRLLIRPLQPLLRLLMDRTIRTSAEAAVEMARLATNEAVLYIAWSIMAVYVNLAGGIGK
PLWQITLGEYAIWFKGFLASSWMYTSMTAAIRIAILLFYRRIFAQSISWLRRVIHLLLALQAVYVVVYSVLPALA
CRPFDSAWNPFERRAHCDDWFFYYSQVALYSTSMVFDLVLLVLPLQPCSRLQMRRGRKAGVIAMFALGAG*
Coding >Ophcf2|02534
ATGTCACCCTCAACCATCCTCATCACCGGCGCAAACGGCTCCCTCGCCCTCGCCGCCGTATCTCACCTGCTAAAG
CACGCTCCCTCGCAGACGCTCCTCCTCACCGTCCGCAACGCTGCCGTCGACGATGTAAACACCCAGGCTCTTCGA
CGTCTGGTGGCTCGTCGTCAGGAGGGTGTTTACATCCGGGAGCTCGACCTTTCGCGCCTCGAGCGTGTGCGTGAC
TTTGCCCGCGAGGTCGAAGCGGATATCGCGAGGGGGAGACTCCCTCCGCTGGCGAGCATCGTCTGTAACGCCTAC
TACTGGAATCTCGTCGGACCGGTCGAGATGACGGTCGATGGCTTCGAGAAGTCGATGCAAGTCAGCCATCTTTCT
CACGCGGCGCTGGTCATGCGTCTCATCCGAAGCTGCGGCGCGCCGACGGCCCGGATTCTCCTCCTTTCCAGCGCC
GTTCACAGACCCGGACGCGGAGCGCCGTTTGAGAAGCTTCCGCCGTCGATCCCGAGTCCGCTTGAGCTGCTTGTT
CGGCCGGAGCCGGACGCGGACGATGACAGGGCGGCTCATGGCTTTCAGCGGTTCATGGTATCTCAAGTATATACT
GACGCTTGCTTCGACGTCAAGGATCCCTCTCTCAAACACATATCCGTCGTCATCGTCAACCCAGGCGTCCTCAGC
GACTCACGCGCTCTTCTCGTCAACACGCCGCGAACAATCTGCCTCACCTCACGACTTCTCATCCGGCCGCTGCAG
CCGCTCCTCCGCCTGCTCATGGACCGCACCATCCGCACCTCGGCCGAGGCCGCCGTCGAGATGGCCCGGTTGGCG
ACCAATGAGGCTGTTCTCTATATTGCCTGGTCCATCATGGCCGTCTACGTCAATCTAGCCGGGGGAATCGGCAAA
CCGCTATGGCAGATAACCCTCGGCGAGTACGCAATCTGGTTCAAGGGCTTCCTCGCCTCATCCTGGATGTACACG
AGCATGACAGCCGCCATCCGCATCGCCATCCTCCTCTTCTACCGCCGCATCTTCGCCCAGAGCATCTCATGGCTA
AGACGAGTCATCCACCTTCTCCTCGCCCTGCAGGCCGTCTACGTCGTCGTCTACTCCGTTCTACCGGCCCTGGCC
TGCCGTCCGTTCGACAGCGCTTGGAACCCGTTTGAACGCCGGGCTCACTGCGATGACTGGTTCTTTTACTATAGT
CAGGTTGCCTTGTACAGCACTAGCATGGTCTTTGACCTCGTTCTCTTGGTCCTACCGCTCCAGCCTTGCAGCAGG
CTCCAGATGCGCCGCGGTCGAAAGGCCGGTGTCATCGCCATGTTTGCCCTGGGAGCCGGGTGA
Transcript >Ophcf2|02534
ATGTCACCCTCAACCATCCTCATCACCGGCGCAAACGGCTCCCTCGCCCTCGCCGCCGTATCTCACCTGCTAAAG
CACGCTCCCTCGCAGACGCTCCTCCTCACCGTCCGCAACGCTGCCGTCGACGATGTAAACACCCAGGCTCTTCGA
CGTCTGGTGGCTCGTCGTCAGGAGGGTGTTTACATCCGGGAGCTCGACCTTTCGCGCCTCGAGCGTGTGCGTGAC
TTTGCCCGCGAGGTCGAAGCGGATATCGCGAGGGGGAGACTCCCTCCGCTGGCGAGCATCGTCTGTAACGCCTAC
TACTGGAATCTCGTCGGACCGGTCGAGATGACGGTCGATGGCTTCGAGAAGTCGATGCAAGTCAGCCATCTTTCT
CACGCGGCGCTGGTCATGCGTCTCATCCGAAGCTGCGGCGCGCCGACGGCCCGGATTCTCCTCCTTTCCAGCGCC
GTTCACAGACCCGGACGCGGAGCGCCGTTTGAGAAGCTTCCGCCGTCGATCCCGAGTCCGCTTGAGCTGCTTGTT
CGGCCGGAGCCGGACGCGGACGATGACAGGGCGGCTCATGGCTTTCAGCGGTTCATGGTATCTCAAGTATATACT
GACGCTTGCTTCGACGTCAAGGATCCCTCTCTCAAACACATATCCGTCGTCATCGTCAACCCAGGCGTCCTCAGC
GACTCACGCGCTCTTCTCGTCAACACGCCGCGAACAATCTGCCTCACCTCACGACTTCTCATCCGGCCGCTGCAG
CCGCTCCTCCGCCTGCTCATGGACCGCACCATCCGCACCTCGGCCGAGGCCGCCGTCGAGATGGCCCGGTTGGCG
ACCAATGAGGCTGTTCTCTATATTGCCTGGTCCATCATGGCCGTCTACGTCAATCTAGCCGGGGGAATCGGCAAA
CCGCTATGGCAGATAACCCTCGGCGAGTACGCAATCTGGTTCAAGGGCTTCCTCGCCTCATCCTGGATGTACACG
AGCATGACAGCCGCCATCCGCATCGCCATCCTCCTCTTCTACCGCCGCATCTTCGCCCAGAGCATCTCATGGCTA
AGACGAGTCATCCACCTTCTCCTCGCCCTGCAGGCCGTCTACGTCGTCGTCTACTCCGTTCTACCGGCCCTGGCC
TGCCGTCCGTTCGACAGCGCTTGGAACCCGTTTGAACGCCGGGCTCACTGCGATGACTGGTTCTTTTACTATAGT
CAGGTTGCCTTGTACAGCACTAGCATGGTCTTTGACCTCGTTCTCTTGGTCCTACCGCTCCAGCCTTGCAGCAGG
CTCCAGATGCGCCGCGGTCGAAAGGCCGGTGTCATCGCCATGTTTGCCCTGGGAGCCGGGTGA
Gene >Ophcf2|02534
ATGTCACCCTCAACCATCCTCATCACCGGCGCAAACGGCTCCCTCGCCCTCGCCGCCGTATCTCACCTGCTAAAG
CACGCTCCCTCGCAGACGCTCCTCCTCACCGTCCGCAACGCTGCCGTCGACGATGTAAACACCCAGGCTCTTCGA
CGTCTGGTGGCTCGTCGTCAGGAGGGTGTTTACATCCGGGAGCTCGACCTTTCGCGCCTCGAGCGTGTGCGTGAC
TTTGCCCGCGAGGTCGAAGCGGATATCGCGAGGGGGAGACTCCCTCCGCTGGCGAGCATCGTCTGTAACGCCTAC
TACTGGAATCTCGTCGGACCGGTCGAGATGACGGTCGATGGCTTCGAGAAGTCGATGCAAGTCAGCCATCTTTCT
CACGCGGCGCTGGTCATGCGTCTCATCCGAAGCTGCGGCGCGCCGACGGCCCGGATTCTCCTCCTTTCCAGCGCC
GTTCACAGACCCGGACGCGGAGCGCCGTTTGAGAAGCTTCCGCCGTCGATCCCGAGTCCGCTTGAGCTGCTTGTT
CGGCCGGAGCCGGACGCGGACGATGACAGGGCGGCTCATGGCTTTCAGCGGTATGCCACTGCCAAGTTGGTTATT
ACTGCTTGGGGGTTTGCCTTGCTGCGTCGTTTACAAAAGGTTTTTTGTTGTTTCTCGGCTTGTCTTTTTTCAGGT
TCATGGTATCTCAAGTATATACTGACGCTTGCTTCGACGTCAAGGATCCCTCTCTCAAACACATATCCGTCGTCA
TCGTCAACCCAGGCGTCCTCAGCGACTCACGCGCTCTTCTCGTCAACACGCCGCGAACAATCTGCCTCACCTCAC
GACTTCTCATCCGGCCGCTGCAGCCGCTCCTCCGCCTGCTCATGGACCGCACCATCCGCACCTCGGCCGAGGCCG
CCGTCGAGATGGCCCGGTTGGCGACCAATGAGGCTGTGCCCGGCCAGAGCGGCTTCTTTACCATGCTGGAGAGGG
ATGAGAGTTCCGAGGAGAGTAGGGATCGGGGGGTGCAGGAGGCGCTTTGGGAGGCGAGTGCTCGGTGGTTGGGGG
TGAGTGGTGAGCTGTAGTTGAGGATGGGGAACTGCATCGGAATTTGTATTTTACGTGTAATCTGTATTAATCTGA
ATGTGAACCTGAAGGGAGGCTGACCGAGGAGACGGTGGATTCGAAGCCTTCCTCACTTGTATTAAAATCAACGTC
CAAAGTTCAATATATATGTATATGTTGTTTCAACTTCATTCTCTCATCATCAACAACATAGACACTCGGTACATG
TAGTTCAATCCCATCAGTTAACAAAACCCCATCAACATCCCGTCATATCCCTCGTACAACTCACCCTCACATCAC
ACCTACACGACACTCACCCCATCCCAACACGAGCCCTCCCAATTCATGTGCATATAGGCGCGGGATCCCACCCCA
ACAACCTCAACTGCAACTCCCCACATGCCCAACATCAAGACAAGGCCTCCGACACGAAACCCTCTCCATTTCCAA
TGCAGGGGACGCCCATCAGCGTCTATCAACCGCCTCGATATACGAGTCCTTATCCCCTTCTAAGCCCCCCCCCCC
CCCCCCTCAACTTCACCTCTCACCTCCATCCCTCGTTCCTTCACCCAGACTGCTGATCATGGCGCAGAACCTAAC
TGAGCAGCTGGCCTCGTTGCTTCCTCCGCCAACTATCGTCGACGACAGTAACAAGGCGTACGGCGTGTCTATTGC
GTGTGCGTTGCTGAGTGGTCTGACTACCTCGGTCGTTGCGTGGCGTCTTTACCTACGTTATGCTTCGCGTGCCTT
TGGTCTCGATGACTGGGCCACTGTTCCCGCCCTTGTGGGAACCCCTATTCCACGAGAATCAAGACGACAGAAGAC
TGACTATCAAGACAGGTTCTCTATATTGCCTGGTCCATCATGGCCGTCTACGTCAATCTAGCCGGGGGAATCGGC
AAACCGCTATGGCAGATAACCCTCGGCGAGTACGCAATCTGGTTCAAGGTAAGCCCCGTCCACCAGCCCAAAGAA
ACCTCACCAACAACCACCAGGGCTTCCTCGCCTCATCCTGGATGTACACGAGCATGACAGCCGCCATCCGCATCG
CCATCCTCCTCTTCTACCGCCGCATCTTCGCCCAGAGCATCTCATGGCTAAGACGAGTCATCCACCTTCTCCTCG
CCCTGCAGGCCGTCTACGTCGTCGTCTACTCCGTTCTACCGGCCCTGGCCTGCCGTCCGTTCGACAGCGCTTGGA
ACCCGTTTGAACGCCGGGCTCACTGCGATGACTGGTTCTTTTACTATAGTCAGGTTGCCTTGTACAGCACTAGCA
TGGTCTTTGACCTCGTTCTCTTGGTCCTACCGCTCCAGCCTTGCAGCAGGCTCCAGATGCGCCGCGGTCGAAAGG
CCGGTGTCATCGCCATGTTTGCCCTGGGAGCCGGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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