Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02516
Gene name
Locationscaffold_02:3970365..3971245
Strand+
Gene length (bp)880
Transcript length (bp)756
Coding sequence length (bp)756
Protein length (aa) 252

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

Domain # Start End Length
1 69 91 22
2 101 123 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02516
MPSSPGRVAIPLERVPYEVSPPMRMRVVDDPESGSPGRARPNDVGEQGKARYCLCIPTTKSPRLRAQMATSIVSG
IFFIAVLAVYVGLSVTGSIRQSELTIIVILIILTSGIFFCFCIIRLWLALHRNDGRSDGRRTVTPELPHHYLVPP
KPIPVVLAQDEEAVGIRGEAVTSKPPAYGRWLETVRVDPNRLFWQRNEDADSRPESGQGPRPPSYASEDGVDYVL
EAQPRSVAPPSITEFHQSPDLGPLRS*
Coding >Ophcf2|02516
ATGCCATCGTCTCCGGGTCGGGTGGCCATACCCCTGGAGAGGGTCCCATATGAAGTCAGCCCTCCGATGCGAATG
AGGGTCGTCGATGACCCTGAGTCGGGCTCACCTGGCCGGGCTCGGCCCAACGACGTTGGTGAACAAGGCAAGGCG
CGATATTGTCTCTGCATTCCTACGACCAAGTCGCCGCGGTTGCGGGCGCAGATGGCTACGTCCATCGTCTCGGGC
ATCTTCTTCATCGCCGTTCTGGCTGTTTACGTTGGCCTCAGCGTGACGGGTAGCATCCGTCAGAGCGAGCTGACC
ATCATCGTCATCCTCATCATCCTCACCTCGGGCATCTTCTTCTGCTTCTGTATCATACGACTATGGCTGGCTCTT
CATCGCAACGACGGACGTAGCGATGGACGGCGAACCGTCACGCCGGAGCTGCCCCATCACTATCTAGTGCCTCCG
AAGCCCATACCCGTCGTACTGGCGCAAGACGAGGAGGCGGTCGGTATCCGGGGCGAGGCGGTAACTTCGAAACCG
CCTGCTTACGGCCGCTGGTTGGAGACGGTGAGAGTCGACCCAAACCGGCTATTCTGGCAGCGCAACGAGGATGCC
GATTCGAGACCGGAGTCTGGCCAAGGGCCGCGCCCGCCTTCTTATGCTTCGGAGGATGGAGTCGACTATGTGCTG
GAAGCGCAGCCGCGGTCGGTGGCGCCGCCGTCTATCACGGAGTTTCATCAGTCTCCGGACTTGGGTCCTTTGCGC
AGTTGA
Transcript >Ophcf2|02516
ATGCCATCGTCTCCGGGTCGGGTGGCCATACCCCTGGAGAGGGTCCCATATGAAGTCAGCCCTCCGATGCGAATG
AGGGTCGTCGATGACCCTGAGTCGGGCTCACCTGGCCGGGCTCGGCCCAACGACGTTGGTGAACAAGGCAAGGCG
CGATATTGTCTCTGCATTCCTACGACCAAGTCGCCGCGGTTGCGGGCGCAGATGGCTACGTCCATCGTCTCGGGC
ATCTTCTTCATCGCCGTTCTGGCTGTTTACGTTGGCCTCAGCGTGACGGGTAGCATCCGTCAGAGCGAGCTGACC
ATCATCGTCATCCTCATCATCCTCACCTCGGGCATCTTCTTCTGCTTCTGTATCATACGACTATGGCTGGCTCTT
CATCGCAACGACGGACGTAGCGATGGACGGCGAACCGTCACGCCGGAGCTGCCCCATCACTATCTAGTGCCTCCG
AAGCCCATACCCGTCGTACTGGCGCAAGACGAGGAGGCGGTCGGTATCCGGGGCGAGGCGGTAACTTCGAAACCG
CCTGCTTACGGCCGCTGGTTGGAGACGGTGAGAGTCGACCCAAACCGGCTATTCTGGCAGCGCAACGAGGATGCC
GATTCGAGACCGGAGTCTGGCCAAGGGCCGCGCCCGCCTTCTTATGCTTCGGAGGATGGAGTCGACTATGTGCTG
GAAGCGCAGCCGCGGTCGGTGGCGCCGCCGTCTATCACGGAGTTTCATCAGTCTCCGGACTTGGGTCCTTTGCGC
AGTTGA
Gene >Ophcf2|02516
ATGCCATCGTCTCCGGGTCGGGTGGCCATACCCCTGGAGAGGGTCCCATATGAAGTCAGCCCTCCGATGCGAATG
AGGGTCGTCGATGACCCTGAGTCGGGCTCACCTGGCCGGGCTCGGCCCAACGACGTTGGTGAACAAGGCAAGGCG
CGATATTGTCTCTGCATTCCTACGACCAAGTCGCCGCGGTTGCGGGCGCAGATGGCTACGTCCATCGTCTCGGGC
ATCTTCTTCATCGCCGTTCTGGCTGTTTGTACGTCTCACTGAAAAAACATCGATGGCTGTAACTGTTGTCAGCTA
ACCGCGGACGCAGACGTTGGCCTCAGCGTGACGGGTAGCATCCGTCAGAGCGAGCTGACCATCATCGTCATCCTC
ATCATCCTCACCTCGGGCATCTTCTTCTGCTTCTGTATCATACGACTATGGCTGGCTCTTCATCGCAACGACGGA
CGTAGCGATGGACGGCGAACCGTCACGCCGGAGCTGCCCCATCACTATCTAGTGCCTCCGAAGCCCATACCCGTC
GTACTGGCGCAAGACGAGGAGGCGGTCGGTATCCGGGGCGAGGCGGTAACTTCGAAACCGCCTGCTTACGGCCGC
TGGTTGGAGACGGTGGTGAGTTTTGCTCTTTTGTTATCCCTGGACCCCATCACACGTTTGAGTGCTGACGCCGTG
TCAGAGAGTCGACCCAAACCGGCTATTCTGGCAGCGCAACGAGGATGCCGATTCGAGACCGGAGTCTGGCCAAGG
GCCGCGCCCGCCTTCTTATGCTTCGGAGGATGGAGTCGACTATGTGCTGGAAGCGCAGCCGCGGTCGGTGGCGCC
GCCGTCTATCACGGAGTTTCATCAGTCTCCGGACTTGGGTCCTTTGCGCAGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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