© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|02458 |
| Gene name | |
| Location | scaffold_02:3800054..3800930 |
| Strand | + |
| Gene length (bp) | 876 |
| Transcript length (bp) | 762 |
| Coding sequence length (bp) | 762 |
| Protein length (aa) | 254 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 19 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 24 | 19 |
| 2 | 108 | 130 | 22 |
| 3 | 230 | 252 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|02458 MRVDLALLLALCLGDAMALWHRGVAADDKLLFRRRGGGRGGGGGGRRGGGRTGGQGTGGGGAISRPNTSPNSNLG GTSIGGTGPKPFIGGGRFYGGGSRVPFRAGARSPLGIAPFFLVGSALAFWPGVWLHGAQVYPYSRDHRYFNQSSN SNETAKVLCGCDRFEVCGCDDNDEGAFIDALIGNGSYDGLNKSLINVGEFKGRKTLFINGTLPNGTTADGPDSSG ARFSAVTATVASALWMAVFSLFAALLLF* |
| Coding | >Ophcf2|02458 ATGCGAGTCGACTTGGCACTCTTGCTTGCTCTTTGCCTGGGCGACGCAATGGCCCTTTGGCACCGCGGCGTTGCT GCTGACGATAAGCTGCTCTTCAGACGGAGGGGAGGCGGCAGAGGGGGCGGAGGCGGAGGCAGACGAGGAGGGGGC AGGACAGGCGGCCAGGGAACGGGTGGAGGAGGAGCCATCTCACGTCCCAATACGTCACCAAACTCCAACTTGGGC GGCACCTCCATCGGAGGCACGGGCCCAAAGCCCTTCATCGGCGGCGGTCGCTTCTACGGCGGCGGCTCACGAGTC CCCTTCAGGGCCGGGGCTAGAAGTCCTCTTGGAATCGCGCCCTTCTTCCTCGTCGGCAGCGCCCTCGCCTTCTGG CCCGGCGTCTGGCTGCACGGCGCCCAAGTCTATCCTTACTCTCGCGATCATCGCTACTTTAACCAGTCCTCCAAT AGCAACGAGACGGCAAAGGTGCTCTGCGGCTGCGATAGGTTCGAGGTCTGCGGCTGCGATGATAACGATGAAGGG GCCTTTATCGACGCCTTGATCGGCAATGGGAGTTACGATGGTCTCAACAAGAGTCTCATCAACGTGGGTGAGTTC AAGGGCCGGAAGACGCTCTTCATCAACGGCACGTTGCCTAATGGGACGACGGCCGATGGGCCCGACTCTTCTGGC GCGAGATTCTCGGCTGTCACTGCGACTGTCGCCTCGGCCCTGTGGATGGCCGTCTTCTCTTTGTTTGCGGCTTTG CTTCTCTTCTAA |
| Transcript | >Ophcf2|02458 ATGCGAGTCGACTTGGCACTCTTGCTTGCTCTTTGCCTGGGCGACGCAATGGCCCTTTGGCACCGCGGCGTTGCT GCTGACGATAAGCTGCTCTTCAGACGGAGGGGAGGCGGCAGAGGGGGCGGAGGCGGAGGCAGACGAGGAGGGGGC AGGACAGGCGGCCAGGGAACGGGTGGAGGAGGAGCCATCTCACGTCCCAATACGTCACCAAACTCCAACTTGGGC GGCACCTCCATCGGAGGCACGGGCCCAAAGCCCTTCATCGGCGGCGGTCGCTTCTACGGCGGCGGCTCACGAGTC CCCTTCAGGGCCGGGGCTAGAAGTCCTCTTGGAATCGCGCCCTTCTTCCTCGTCGGCAGCGCCCTCGCCTTCTGG CCCGGCGTCTGGCTGCACGGCGCCCAAGTCTATCCTTACTCTCGCGATCATCGCTACTTTAACCAGTCCTCCAAT AGCAACGAGACGGCAAAGGTGCTCTGCGGCTGCGATAGGTTCGAGGTCTGCGGCTGCGATGATAACGATGAAGGG GCCTTTATCGACGCCTTGATCGGCAATGGGAGTTACGATGGTCTCAACAAGAGTCTCATCAACGTGGGTGAGTTC AAGGGCCGGAAGACGCTCTTCATCAACGGCACGTTGCCTAATGGGACGACGGCCGATGGGCCCGACTCTTCTGGC GCGAGATTCTCGGCTGTCACTGCGACTGTCGCCTCGGCCCTGTGGATGGCCGTCTTCTCTTTGTTTGCGGCTTTG CTTCTCTTCTAA |
| Gene | >Ophcf2|02458 ATGCGAGTCGACTTGGCACTCTTGCTTGCTCTTTGCCTGGGCGACGCAATGGCCCTTTGGCACCGCGGCGTTGCT GCTGACGATAAGCTGCTCTTCAGACGGAGGGGAGGCGGCAGAGGGGGCGGAGGCGGAGGCAGACGAGGAGGGGGC AGGACAGGCGGCCAGGGAACGGGTGGAGGAGGAGCCATCTCGTGAGTATCCCCGAGTCGCGTCATCGCGTCATCC AGCTGGTCTTTTTCACCTACCTGCGAAGAAGTACCTACCTATCCACCTACTCACCTAGATACTGACTGCTCGCGA CACAGACGTCCCAATACGTCACCAAACTCCAACTTGGGCGGCACCTCCATCGGAGGCACGGGCCCAAAGCCCTTC ATCGGCGGCGGTCGCTTCTACGGCGGCGGCTCACGAGTCCCCTTCAGGGCCGGGGCTAGAAGTCCTCTTGGAATC GCGCCCTTCTTCCTCGTCGGCAGCGCCCTCGCCTTCTGGCCCGGCGTCTGGCTGCACGGCGCCCAAGTCTATCCT TACTCTCGCGATCATCGCTACTTTAACCAGTCCTCCAATAGCAACGAGACGGCAAAGGTGCTCTGCGGCTGCGAT AGGTTCGAGGTCTGCGGCTGCGATGATAACGATGAAGGGGCCTTTATCGACGCCTTGATCGGCAATGGGAGTTAC GATGGTCTCAACAAGAGTCTCATCAACGTGGGTGAGTTCAAGGGCCGGAAGACGCTCTTCATCAACGGCACGTTG CCTAATGGGACGACGGCCGATGGGCCCGACTCTTCTGGCGCGAGATTCTCGGCTGTCACTGCGACTGTCGCCTCG GCCCTGTGGATGGCCGTCTTCTCTTTGTTTGCGGCTTTGCTTCTCTTCTAA |