Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02438
Gene name
Locationscaffold_02:3744671..3745385
Strand-
Gene length (bp)714
Transcript length (bp)648
Coding sequence length (bp)648
Protein length (aa) 216

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20238 DUF6595 Family of unknown function (DUF6595) 1.1E-35 20 159

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 2 24 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02438
MVAGFVVVAFVLALAEGVVGHFALSFPPWRADSLSNKSYSQWNYPCAGVDYGAGNITDWPLQGGSLRLELHHKWT
YLYVNLGLGRNATNFNVSLTPEFLNVTGKGTLCIDKLPIPVPVENGTLATLQVVTPGSSGSALYNCADIRLVEGA
KSLDNCTNEGVSVKTVHSEQDAGASGNASSGQQAKGLAASTSAGPYTIALGTACVLVSLGLSLVL*
Coding >Ophcf2|02438
ATGGTTGCGGGATTCGTTGTCGTGGCTTTTGTTTTGGCCTTGGCTGAGGGCGTTGTTGGCCACTTTGCCCTCTCC
TTTCCCCCTTGGCGAGCCGACTCTCTGAGTAACAAATCCTACAGCCAATGGAACTACCCCTGCGCCGGCGTCGAC
TACGGAGCCGGCAACATCACCGACTGGCCTCTTCAAGGCGGCTCCCTCCGTCTGGAGCTGCACCACAAATGGACC
TACCTCTACGTCAACCTCGGCCTCGGCCGCAACGCCACAAACTTCAACGTCTCCCTCACCCCGGAGTTTCTCAAC
GTTACCGGCAAGGGCACCCTCTGCATCGACAAGCTGCCCATCCCCGTTCCCGTCGAGAACGGCACCCTGGCGACT
CTTCAGGTCGTCACCCCTGGCAGCTCCGGCTCGGCGCTGTACAACTGCGCCGATATCCGGCTCGTTGAGGGTGCC
AAGTCGCTTGATAACTGTACAAACGAGGGCGTCAGTGTCAAGACGGTTCATAGTGAGCAGGATGCCGGTGCTAGC
GGGAATGCCTCGTCTGGGCAGCAGGCCAAAGGTCTGGCTGCGTCGACGTCGGCGGGCCCTTATACTATCGCCTTG
GGAACCGCCTGTGTGCTGGTTTCCTTGGGTCTTTCGCTTGTTCTGTAG
Transcript >Ophcf2|02438
ATGGTTGCGGGATTCGTTGTCGTGGCTTTTGTTTTGGCCTTGGCTGAGGGCGTTGTTGGCCACTTTGCCCTCTCC
TTTCCCCCTTGGCGAGCCGACTCTCTGAGTAACAAATCCTACAGCCAATGGAACTACCCCTGCGCCGGCGTCGAC
TACGGAGCCGGCAACATCACCGACTGGCCTCTTCAAGGCGGCTCCCTCCGTCTGGAGCTGCACCACAAATGGACC
TACCTCTACGTCAACCTCGGCCTCGGCCGCAACGCCACAAACTTCAACGTCTCCCTCACCCCGGAGTTTCTCAAC
GTTACCGGCAAGGGCACCCTCTGCATCGACAAGCTGCCCATCCCCGTTCCCGTCGAGAACGGCACCCTGGCGACT
CTTCAGGTCGTCACCCCTGGCAGCTCCGGCTCGGCGCTGTACAACTGCGCCGATATCCGGCTCGTTGAGGGTGCC
AAGTCGCTTGATAACTGTACAAACGAGGGCGTCAGTGTCAAGACGGTTCATAGTGAGCAGGATGCCGGTGCTAGC
GGGAATGCCTCGTCTGGGCAGCAGGCCAAAGGTCTGGCTGCGTCGACGTCGGCGGGCCCTTATACTATCGCCTTG
GGAACCGCCTGTGTGCTGGTTTCCTTGGGTCTTTCGCTTGTTCTGTAG
Gene >Ophcf2|02438
ATGGTTGCGGGATTCGTTGTCGTGGCTTTTGTTTTGGCCTTGGCTGAGGGCGTTGTTGGCCACTTTGCCCTCTCC
TTTCCCCCTTGGCGAGCCGACTCTCTGAGTAACAAATCCTACAGCCAATGGAACTACCCCTGTACGTACGAAAGA
CACACGCAACCACGTCCGCCCGTCCGTCAAGGCTAACCTCCAAACCTCGCAGGCGCCGGCGTCGACTACGGAGCC
GGCAACATCACCGACTGGCCTCTTCAAGGCGGCTCCCTCCGTCTGGAGCTGCACCACAAATGGACCTACCTCTAC
GTCAACCTCGGCCTCGGCCGCAACGCCACAAACTTCAACGTCTCCCTCACCCCGGAGTTTCTCAACGTTACCGGC
AAGGGCACCCTCTGCATCGACAAGCTGCCCATCCCCGTTCCCGTCGAGAACGGCACCCTGGCGACTCTTCAGGTC
GTCACCCCTGGCAGCTCCGGCTCGGCGCTGTACAACTGCGCCGATATCCGGCTCGTTGAGGGTGCCAAGTCGCTT
GATAACTGTACAAACGAGGGCGTCAGTGTCAAGACGGTTCATAGTGAGCAGGATGCCGGTGCTAGCGGGAATGCC
TCGTCTGGGCAGCAGGCCAAAGGTCTGGCTGCGTCGACGTCGGCGGGCCCTTATACTATCGCCTTGGGAACCGCC
TGTGTGCTGGTTTCCTTGGGTCTTTCGCTTGTTCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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