Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02433
Gene name
Locationscaffold_02:3732790..3733884
Strand-
Gene length (bp)1094
Transcript length (bp)966
Coding sequence length (bp)966
Protein length (aa) 322

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00293 NUDIX NUDIX domain 1.1E-07 172 301

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02433
MCRWMRSASMLWAAGLLLATALVGPLFQQHMFSSLAHRLPKSPPSVYPHRHIHGRGMADGVRIHLPEGLTRDQLQ
SFRPFKEWMATLNRSLARQTTASHPFHADPYVLRSITVQSFDRFGGNRLGFVKLAASVSNAAGESLPGAALLRGP
SVAVLFMLIPDDSDDADDERYAVMTVQPRIPAGSMAFAELPAGMVDDAGSFKGAAAKEMEEELGITITDDHQMTC
LSELAVAGDNDEGLATAMFPSAGGCDEHVTLYSHERRVPRDQLRDWTGRLTGLRSEGEKITLKLVPMRDLWREGA
RDAKALGALALWEALRREGRL*
Coding >Ophcf2|02433
ATGTGTCGCTGGATGCGATCTGCCTCAATGCTGTGGGCTGCTGGCCTCTTGCTGGCGACGGCTCTCGTAGGGCCT
CTCTTCCAGCAACACATGTTCAGCAGCCTCGCTCATCGCCTGCCAAAGAGTCCTCCCTCTGTCTATCCCCATCGA
CATATACACGGCAGAGGCATGGCCGACGGTGTTCGTATCCATCTGCCCGAAGGCTTGACGCGGGACCAGCTTCAG
TCCTTTAGGCCTTTCAAGGAATGGATGGCCACTCTCAACAGATCCCTCGCTCGCCAGACGACGGCCTCGCATCCC
TTCCACGCCGACCCCTACGTCCTCCGCTCCATCACGGTCCAGTCCTTCGACCGCTTCGGAGGCAACCGTCTCGGC
TTCGTCAAGCTCGCAGCCTCGGTCTCCAACGCAGCGGGCGAGAGCCTCCCGGGCGCTGCCCTCCTACGCGGGCCC
TCTGTCGCCGTTCTCTTCATGCTGATCCCCGACGATAGCGACGACGCAGACGACGAGCGCTACGCCGTCATGACG
GTTCAACCGCGTATCCCCGCTGGCAGCATGGCTTTTGCAGAGCTTCCGGCCGGTATGGTCGACGATGCCGGCAGC
TTCAAGGGCGCGGCGGCCAAGGAGATGGAGGAGGAGCTGGGCATTACCATTACCGATGACCACCAGATGACGTGC
TTGAGTGAACTGGCCGTCGCTGGCGACAACGACGAGGGTCTGGCGACCGCCATGTTCCCCAGCGCAGGCGGCTGC
GACGAGCACGTTACGCTGTACAGCCATGAGCGTCGCGTCCCGAGGGACCAGTTGCGCGACTGGACTGGGCGCTTG
ACGGGCCTGCGGTCAGAGGGCGAGAAGATTACGCTCAAGTTGGTGCCTATGAGAGATTTGTGGCGCGAGGGCGCT
CGAGATGCAAAGGCTTTGGGAGCGCTCGCGTTGTGGGAGGCGCTGCGGAGGGAGGGCCGTCTGTAG
Transcript >Ophcf2|02433
ATGTGTCGCTGGATGCGATCTGCCTCAATGCTGTGGGCTGCTGGCCTCTTGCTGGCGACGGCTCTCGTAGGGCCT
CTCTTCCAGCAACACATGTTCAGCAGCCTCGCTCATCGCCTGCCAAAGAGTCCTCCCTCTGTCTATCCCCATCGA
CATATACACGGCAGAGGCATGGCCGACGGTGTTCGTATCCATCTGCCCGAAGGCTTGACGCGGGACCAGCTTCAG
TCCTTTAGGCCTTTCAAGGAATGGATGGCCACTCTCAACAGATCCCTCGCTCGCCAGACGACGGCCTCGCATCCC
TTCCACGCCGACCCCTACGTCCTCCGCTCCATCACGGTCCAGTCCTTCGACCGCTTCGGAGGCAACCGTCTCGGC
TTCGTCAAGCTCGCAGCCTCGGTCTCCAACGCAGCGGGCGAGAGCCTCCCGGGCGCTGCCCTCCTACGCGGGCCC
TCTGTCGCCGTTCTCTTCATGCTGATCCCCGACGATAGCGACGACGCAGACGACGAGCGCTACGCCGTCATGACG
GTTCAACCGCGTATCCCCGCTGGCAGCATGGCTTTTGCAGAGCTTCCGGCCGGTATGGTCGACGATGCCGGCAGC
TTCAAGGGCGCGGCGGCCAAGGAGATGGAGGAGGAGCTGGGCATTACCATTACCGATGACCACCAGATGACGTGC
TTGAGTGAACTGGCCGTCGCTGGCGACAACGACGAGGGTCTGGCGACCGCCATGTTCCCCAGCGCAGGCGGCTGC
GACGAGCACGTTACGCTGTACAGCCATGAGCGTCGCGTCCCGAGGGACCAGTTGCGCGACTGGACTGGGCGCTTG
ACGGGCCTGCGGTCAGAGGGCGAGAAGATTACGCTCAAGTTGGTGCCTATGAGAGATTTGTGGCGCGAGGGCGCT
CGAGATGCAAAGGCTTTGGGAGCGCTCGCGTTGTGGGAGGCGCTGCGGAGGGAGGGCCGTCTGTAG
Gene >Ophcf2|02433
ATGTGTCGCTGGATGCGATCTGCCTCAATGTAGGTGGTCTGTAACACGTGACCACCACCATCTTCACCCTTGACG
TCATGACCCGAGCTGACCCCGTACCTGAGGCTGTGGGCTGCTGGCCTCTTGCTGGCGACGGCTCTCGTAGGGCCT
CTCTTCCAGCAACACATGTTCAGCAGCCTCGCTCATCGCCTGCCAAAGAGTCCTCCCTCTGTCTATCCCCATCGA
CATATACACGGCAGAGGCATGGCCGACGGTGTTCGTATCCATCTGCCCGAAGGCTTGACGCGGGACCAGCTTCAG
TCCTTTAGGCCTTTCAAGGTGCTATGGAACTGAGAGAAACAGGGCTCGACTCCCGCTGACCTTTGACGTAGGAAT
GGATGGCCACTCTCAACAGATCCCTCGCTCGCCAGACGACGGCCTCGCATCCCTTCCACGCCGACCCCTACGTCC
TCCGCTCCATCACGGTCCAGTCCTTCGACCGCTTCGGAGGCAACCGTCTCGGCTTCGTCAAGCTCGCAGCCTCGG
TCTCCAACGCAGCGGGCGAGAGCCTCCCGGGCGCTGCCCTCCTACGCGGGCCCTCTGTCGCCGTTCTCTTCATGC
TGATCCCCGACGATAGCGACGACGCAGACGACGAGCGCTACGCCGTCATGACGGTTCAACCGCGTATCCCCGCTG
GCAGCATGGCTTTTGCAGAGCTTCCGGCCGGTATGGTCGACGATGCCGGCAGCTTCAAGGGCGCGGCGGCCAAGG
AGATGGAGGAGGAGCTGGGCATTACCATTACCGATGACCACCAGATGACGTGCTTGAGTGAACTGGCCGTCGCTG
GCGACAACGACGAGGGTCTGGCGACCGCCATGTTCCCCAGCGCAGGCGGCTGCGACGAGCACGTTACGCTGTACA
GCCATGAGCGTCGCGTCCCGAGGGACCAGTTGCGCGACTGGACTGGGCGCTTGACGGGCCTGCGGTCAGAGGGCG
AGAAGATTACGCTCAAGTTGGTGCCTATGAGAGATTTGTGGCGCGAGGGCGCTCGAGATGCAAAGGCTTTGGGAG
CGCTCGCGTTGTGGGAGGCGCTGCGGAGGGAGGGCCGTCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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