Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02417
Gene name
Locationscaffold_02:3692390..3693047
Strand-
Gene length (bp)657
Transcript length (bp)657
Coding sequence length (bp)657
Protein length (aa) 219

Overview

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PFAM Domains

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1426 0.0489 0.9436 0.1506 0.0779 0.052 0.2284 0.1731 0.0802 0.007

SignalP

SignalP signal predicted Location Score
Yes 1 - 27 0.851717

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup7311
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|02417 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|6761
Ophiocordyceps kimflemingae Ophio5|2816

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02417
MRPAIILFAVGALAAVSRPNKAPTAVGKPTKATSTKAVSDIDKLNRAFAETGGKIQSLADTIDKWDGSVVTAPDV
AIKAQELRQSMNDFKSVIEGIGKISEADRKKKGVHVLRLADPALSLKETSTTAISKISGIPGARAFIHEMFKSEK
KPYLDLLKATMEKMPGSISKSGVPGSPDNLMTYAMKVAEVEWEKFMKDLEPVPEERTAFDDVISLLFS*
Coding >Ophcf2|02417
ATGCGGCCCGCCATCATTCTCTTTGCCGTCGGCGCCCTCGCCGCCGTCAGCAGGCCGAACAAAGCCCCTACCGCC
GTCGGCAAACCAACCAAAGCTACTTCCACCAAAGCCGTCTCCGACATCGACAAGCTGAACAGAGCTTTCGCCGAA
ACCGGCGGCAAGATACAGTCCCTCGCCGACACGATTGATAAATGGGATGGGTCTGTGGTGACAGCTCCGGATGTG
GCGATCAAGGCGCAAGAATTACGCCAGTCAATGAATGACTTCAAATCCGTCATCGAGGGAATCGGCAAGATCAGC
GAGGCGGACCGGAAGAAGAAGGGTGTGCATGTGCTCCGGTTGGCGGATCCGGCCTTGAGCCTCAAGGAGACTTCT
ACCACGGCCATCTCTAAGATTAGCGGGATTCCCGGCGCCAGAGCGTTCATTCACGAGATGTTCAAGTCGGAGAAG
AAACCGTACCTCGACCTGCTGAAAGCCACGATGGAGAAGATGCCCGGCAGCATCTCCAAGTCTGGGGTGCCCGGC
TCGCCAGACAACCTGATGACTTATGCTATGAAGGTTGCCGAGGTTGAATGGGAAAAGTTCATGAAAGACCTGGAG
CCAGTCCCTGAGGAAAGGACTGCCTTTGATGATGTTATTTCCCTCCTTTTCTCCTAA
Transcript >Ophcf2|02417
ATGCGGCCCGCCATCATTCTCTTTGCCGTCGGCGCCCTCGCCGCCGTCAGCAGGCCGAACAAAGCCCCTACCGCC
GTCGGCAAACCAACCAAAGCTACTTCCACCAAAGCCGTCTCCGACATCGACAAGCTGAACAGAGCTTTCGCCGAA
ACCGGCGGCAAGATACAGTCCCTCGCCGACACGATTGATAAATGGGATGGGTCTGTGGTGACAGCTCCGGATGTG
GCGATCAAGGCGCAAGAATTACGCCAGTCAATGAATGACTTCAAATCCGTCATCGAGGGAATCGGCAAGATCAGC
GAGGCGGACCGGAAGAAGAAGGGTGTGCATGTGCTCCGGTTGGCGGATCCGGCCTTGAGCCTCAAGGAGACTTCT
ACCACGGCCATCTCTAAGATTAGCGGGATTCCCGGCGCCAGAGCGTTCATTCACGAGATGTTCAAGTCGGAGAAG
AAACCGTACCTCGACCTGCTGAAAGCCACGATGGAGAAGATGCCCGGCAGCATCTCCAAGTCTGGGGTGCCCGGC
TCGCCAGACAACCTGATGACTTATGCTATGAAGGTTGCCGAGGTTGAATGGGAAAAGTTCATGAAAGACCTGGAG
CCAGTCCCTGAGGAAAGGACTGCCTTTGATGATGTTATTTCCCTCCTTTTCTCCTAA
Gene >Ophcf2|02417
ATGCGGCCCGCCATCATTCTCTTTGCCGTCGGCGCCCTCGCCGCCGTCAGCAGGCCGAACAAAGCCCCTACCGCC
GTCGGCAAACCAACCAAAGCTACTTCCACCAAAGCCGTCTCCGACATCGACAAGCTGAACAGAGCTTTCGCCGAA
ACCGGCGGCAAGATACAGTCCCTCGCCGACACGATTGATAAATGGGATGGGTCTGTGGTGACAGCTCCGGATGTG
GCGATCAAGGCGCAAGAATTACGCCAGTCAATGAATGACTTCAAATCCGTCATCGAGGGAATCGGCAAGATCAGC
GAGGCGGACCGGAAGAAGAAGGGTGTGCATGTGCTCCGGTTGGCGGATCCGGCCTTGAGCCTCAAGGAGACTTCT
ACCACGGCCATCTCTAAGATTAGCGGGATTCCCGGCGCCAGAGCGTTCATTCACGAGATGTTCAAGTCGGAGAAG
AAACCGTACCTCGACCTGCTGAAAGCCACGATGGAGAAGATGCCCGGCAGCATCTCCAAGTCTGGGGTGCCCGGC
TCGCCAGACAACCTGATGACTTATGCTATGAAGGTTGCCGAGGTTGAATGGGAAAAGTTCATGAAAGACCTGGAG
CCAGTCCCTGAGGAAAGGACTGCCTTTGATGATGTTATTTCCCTCCTTTTCTCCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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