Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02414
Gene name
Locationscaffold_02:3683736..3684832
Strand+
Gene length (bp)1096
Transcript length (bp)939
Coding sequence length (bp)939
Protein length (aa) 313

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01670 Glyco_hydro_12 Glycosyl hydrolase family 12 1.9E-20 66 307

GO

GO Term Description Terminal node
GO:0008810 cellulase activity Yes
GO:0000272 polysaccharide catabolic process Yes
GO:0005975 carbohydrate metabolic process No
GO:0016787 hydrolase activity No
GO:0043170 macromolecule metabolic process No
GO:1901575 organic substance catabolic process No
GO:0003674 molecular_function No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0009057 macromolecule catabolic process No
GO:0005976 polysaccharide metabolic process No
GO:0016052 carbohydrate catabolic process No
GO:0008150 biological_process No
GO:0009056 catabolic process No
GO:0003824 catalytic activity No
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds No
GO:0008152 metabolic process No
GO:0044238 primary metabolic process No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02414
MFRWLVNVGLLVLPIAATLGILIGLQAHRQAFGQQPLFTPPITTKWLEQTYCQKSYGVHPDIKGQQYTLNPNQWA
IKPGDEGFLCMNVTTYDNQTYATETTAPQFKVFWQYPQYKTGQPVHAFPNIKVDGDVLPVKLERVQEMEVDFQWT
MRLDNDTGPTSSLADLANANVNSNVAIDMFVDSDLEKAQDSERAKYEVMVWFAAIGPATFAIGQDDKPIMSKKVD
GTNFNLYYGLNARQQNVLTWKSTSMTDDFHGDLTPLIRQVFQTKRDGFPSSSDYLGYFSFGSEAYYSDKTVTFSV
PSLSIDIRETKS*
Coding >Ophcf2|02414
ATGTTCCGCTGGCTCGTCAACGTCGGCCTCTTGGTCCTGCCGATAGCCGCCACGCTCGGCATCCTCATCGGGCTG
CAGGCACATCGACAGGCTTTCGGCCAGCAGCCGCTCTTCACGCCGCCAATCACCACCAAGTGGCTTGAACAGACG
TACTGCCAGAAGTCGTACGGCGTGCATCCCGACATAAAGGGCCAGCAATATACGCTCAATCCCAACCAATGGGCC
ATCAAACCCGGCGACGAGGGCTTCCTCTGCATGAATGTGACGACGTACGACAACCAGACATACGCCACAGAGACG
ACGGCCCCTCAGTTCAAGGTCTTCTGGCAATATCCCCAGTATAAGACCGGACAGCCCGTCCACGCCTTCCCTAAC
ATCAAGGTCGACGGCGATGTGCTACCCGTCAAGCTCGAGCGCGTCCAAGAGATGGAAGTCGACTTTCAATGGACC
ATGCGGCTTGACAATGACACGGGCCCCACGAGCAGTCTCGCTGACCTGGCAAATGCCAACGTCAACTCCAACGTG
GCCATCGACATGTTTGTCGACAGTGACCTCGAAAAGGCCCAGGACAGCGAGCGTGCCAAGTACGAAGTCATGGTG
TGGTTTGCCGCCATTGGCCCGGCAACCTTTGCCATCGGCCAAGACGACAAGCCCATCATGTCCAAGAAGGTCGAC
GGCACGAACTTCAATCTGTACTATGGTCTCAATGCCCGCCAGCAAAATGTCTTGACTTGGAAGTCTACGAGCATG
ACGGACGATTTCCACGGCGACCTGACGCCCCTTATCCGCCAGGTATTCCAGACAAAACGCGACGGCTTCCCCTCG
TCGTCGGACTACTTGGGCTATTTTTCTTTTGGTTCCGAGGCATATTATTCAGACAAGACGGTGACATTTTCTGTT
CCATCACTGTCAATAGATATCCGTGAGACTAAATCGTAA
Transcript >Ophcf2|02414
ATGTTCCGCTGGCTCGTCAACGTCGGCCTCTTGGTCCTGCCGATAGCCGCCACGCTCGGCATCCTCATCGGGCTG
CAGGCACATCGACAGGCTTTCGGCCAGCAGCCGCTCTTCACGCCGCCAATCACCACCAAGTGGCTTGAACAGACG
TACTGCCAGAAGTCGTACGGCGTGCATCCCGACATAAAGGGCCAGCAATATACGCTCAATCCCAACCAATGGGCC
ATCAAACCCGGCGACGAGGGCTTCCTCTGCATGAATGTGACGACGTACGACAACCAGACATACGCCACAGAGACG
ACGGCCCCTCAGTTCAAGGTCTTCTGGCAATATCCCCAGTATAAGACCGGACAGCCCGTCCACGCCTTCCCTAAC
ATCAAGGTCGACGGCGATGTGCTACCCGTCAAGCTCGAGCGCGTCCAAGAGATGGAAGTCGACTTTCAATGGACC
ATGCGGCTTGACAATGACACGGGCCCCACGAGCAGTCTCGCTGACCTGGCAAATGCCAACGTCAACTCCAACGTG
GCCATCGACATGTTTGTCGACAGTGACCTCGAAAAGGCCCAGGACAGCGAGCGTGCCAAGTACGAAGTCATGGTG
TGGTTTGCCGCCATTGGCCCGGCAACCTTTGCCATCGGCCAAGACGACAAGCCCATCATGTCCAAGAAGGTCGAC
GGCACGAACTTCAATCTGTACTATGGTCTCAATGCCCGCCAGCAAAATGTCTTGACTTGGAAGTCTACGAGCATG
ACGGACGATTTCCACGGCGACCTGACGCCCCTTATCCGCCAGGTATTCCAGACAAAACGCGACGGCTTCCCCTCG
TCGTCGGACTACTTGGGCTATTTTTCTTTTGGTTCCGAGGCATATTATTCAGACAAGACGGTGACATTTTCTGTT
CCATCACTGTCAATAGATATCCGTGAGACTAAATCGTAA
Gene >Ophcf2|02414
ATGTTCCGCTGGCTCGTCAACGTCGGCCTCTTGGTCCTGCCGATAGCCGCCACGCTCGGCATCCTCATCGGGCTG
CAGGCACATCGACAGGCTTTCGGCCAGCAGCCGCTCTTCACGCCGCCAATCACCACCAAGTGGCTTGAACAGACG
TACTGCCAGAAGTCGTACGGCGTGCATCCCGACATAAAGGGCCAGCAATATACGCGTACGTCCTTTATCCCTTGC
TTCCAGACTTAGTCGCTGACCCTCGCAGTCAATCCCAACCAATGGGCCATCAAACCCGGCGACGAGGGCTTCCTC
TGCATGAATGTGCGTCACAAATACTGGCACATGGGTTCCTCCCCCCTACTGACACTTCTTAATAGGTGACGACGT
ACGACAACCAGACATACGCCACAGAGACGACGGCCCCTCAGTTCAAGGTCTTCTGGCAATATCCCCAGTATAAGA
CCGGACAGCCCGTCCACGCCTTCCCTAACATCAAGGTCGACGGCGATGTGCTACCCGTCAAGCTCGAGCGCGTCC
AAGAGATGGAAGTCGACTTTCAATGGACCATGCGGCTTGACAATGACACGGGCCCCACGAGCAGTCTCGCTGACC
TGGCAAATGCCAACGTCAACTCCAACGTGGCCATCGACATGTTTGTCGACAGTGACCTCGAAAAGGCCCAGGACA
GCGAGCGTGCCAAGTACGAAGTCATGGTGTGGTTTGCCGCCATTGGCCCGGCAACCTTTGCCATCGGCCAAGACG
ACAAGCCCATCATGTCCAAGAAGGTCGACGGCACGAACTTGTGAGTTGTCCCTCGTATTAAGACGGTTGTCTCTC
GTGATTGACGCTTGTCAGCAATCTGTACTATGGTCTCAATGCCCGCCAGCAAAATGTCTTGACTTGGAAGTCTAC
GAGCATGACGGACGATTTCCACGGCGACCTGACGCCCCTTATCCGCCAGGTATTCCAGACAAAACGCGACGGCTT
CCCCTCGTCGTCGGACTACTTGGGCTATTTTTCTTTTGGTTCCGAGGCATATTATTCAGACAAGACGGTGACATT
TTCTGTTCCATCACTGTCAATAGATATCCGTGAGACTAAATCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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