© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|02411 |
| Gene name | |
| Location | scaffold_02:3673030..3674914 |
| Strand | - |
| Gene length (bp) | 1884 |
| Transcript length (bp) | 1830 |
| Coding sequence length (bp) | 1830 |
| Protein length (aa) | 610 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 5.1E-30 | 104 | 547 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 4.2E-07 | 141 | 286 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 139 | 161 | 22 |
| 2 | 173 | 190 | 17 |
| 3 | 195 | 217 | 22 |
| 4 | 230 | 252 | 22 |
| 5 | 262 | 284 | 22 |
| 6 | 388 | 410 | 22 |
| 7 | 425 | 447 | 22 |
| 8 | 454 | 476 | 22 |
| 9 | 496 | 518 | 22 |
| 10 | 566 | 588 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 51.15 | 29.36 | 72.93 |
| Alive | In ants, during behavior modification | 45.60 | 25.75 | 65.45 |
| Dead | In ants, recently dead | 49.72 | 28.46 | 70.98 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.595110 | no |
| Alive | Dead | 0.650081 | no |
| Dead | Fungus | 0.906676 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|02411 MARAQGGPRRPSSGPACRTLSSGSFHAGAPIPTLAGFRRASTHRYQTFPASVAPPAEAEAEAGGDDDDDDNDNDD DDDDGAGGSSSDGSSHEHQQTPLPVRQLLLLAFLSLAEQTALNSISPYLPRMVASTPGIPPGQIGLYVGILASAF ALAQLSTNFLWGYASDVVGRKPVLLAGTASLAGCFALFGLCRQYWHIVVVHVAMGLLNGNAACVPTVLGEVTDRS NQSKAFTYLPVIYSIGGITGPALGGLLVGHIVPSHPYLAPNVCAAVLLAVSVAVVALWFEETLEEDDEEAGPWEP VFLHRVSSWLRSKFRPETSNGSRSWSSRWPHAQTTDQRRPLLSPNSSLSSSSADDDHHVQDGIPSSKAAVQTKGP AWRDLLNHTTLLLLSTYLVFQLSNISFNSLYPIFAAAPAPAGRELDPGKIGVSLSFAGLATILFQAFFYQPLKAR TGSLGAYRLSLLGIAISMVLMPWVGYLDDEPLFGIGSGRLGLYAQLGLVLVLKNVCAVGGLSSVMLLITNSAPSH ASLGTLNGVAQTLSALGRSFGPFVSGGLFSLSLDVRPKGEALAWSVFGGLALAGWICSLFIRGDGLESEDLDGDD ESEDGHGRA* |
| Coding | >Ophcf2|02411 ATGGCCCGCGCCCAGGGCGGCCCGCGTCGGCCCAGCTCCGGCCCCGCCTGCCGGACGCTGTCCTCCGGCTCGTTC CACGCCGGGGCGCCCATTCCGACGCTGGCGGGCTTCCGGCGGGCCTCGACGCATCGTTATCAGACTTTTCCCGCG AGCGTGGCGCCGCCGGCTGAGGCTGAGGCTGAGGCTGGTGGTGATGACGATGATGACGACAACGACAACGACGAT GATGACGACGATGGGGCTGGGGGTAGCTCCAGCGACGGTTCCTCGCACGAGCACCAGCAGACTCCTCTCCCCGTC CGCCAGCTCCTCCTACTAGCCTTTCTCTCTCTCGCCGAGCAGACGGCCCTCAATTCCATCTCGCCTTACCTCCCG CGCATGGTAGCCTCGACGCCCGGTATCCCTCCGGGCCAGATCGGGCTGTACGTCGGTATCCTGGCCAGTGCCTTT GCCCTGGCTCAGCTCTCGACCAACTTTCTCTGGGGCTACGCCTCTGATGTCGTCGGTCGTAAGCCCGTGCTTCTG GCTGGCACTGCGTCATTGGCTGGCTGTTTTGCCCTCTTTGGACTGTGTCGGCAATACTGGCATATTGTTGTCGTT CACGTTGCCATGGGGCTGCTCAATGGGAACGCCGCCTGCGTGCCTACTGTTCTCGGCGAAGTGACTGACCGGTCG AATCAGAGCAAGGCTTTTACCTACCTGCCCGTCATCTACTCCATAGGCGGCATCACTGGTCCGGCCCTCGGCGGC TTGTTGGTCGGCCACATAGTGCCGAGTCACCCGTACCTTGCGCCCAACGTCTGCGCTGCCGTCCTACTCGCCGTC AGTGTCGCCGTCGTCGCCCTCTGGTTTGAGGAGACGCTTGAAGAGGATGACGAGGAGGCGGGACCGTGGGAACCC GTCTTCCTCCATCGTGTCTCGTCTTGGCTGCGTTCCAAGTTTCGTCCCGAGACGAGCAACGGTTCTCGTTCCTGG AGCTCGCGCTGGCCGCATGCTCAGACGACGGACCAGCGCAGGCCCTTGCTATCGCCGAATTCGTCTCTCTCGTCT TCTTCCGCCGACGATGACCACCATGTCCAAGACGGCATACCCTCCTCCAAGGCTGCTGTCCAGACAAAGGGTCCC GCCTGGCGGGATCTCCTGAACCACACGACGCTCCTCCTTCTCTCCACCTACCTCGTCTTTCAGCTGTCCAACATC AGCTTCAACAGCCTGTACCCCATCTTCGCCGCTGCACCTGCACCGGCGGGCCGCGAGTTGGACCCCGGCAAGATC GGAGTCAGCCTTAGCTTCGCCGGTCTGGCCACCATTCTATTCCAGGCCTTCTTCTACCAGCCGCTCAAGGCCAGG ACCGGGAGCCTCGGCGCGTACCGCCTGTCGCTGCTGGGCATAGCCATCAGCATGGTTCTCATGCCCTGGGTGGGC TATCTCGACGATGAGCCGCTGTTTGGCATTGGCAGCGGCCGTCTTGGGCTCTATGCACAGCTCGGCCTTGTTTTG GTTTTGAAGAATGTTTGCGCTGTTGGCGGCCTTTCGAGCGTCATGCTTCTGATCACCAACTCAGCCCCGTCGCAC GCCAGCCTCGGCACACTCAACGGCGTGGCCCAAACGCTGTCGGCGCTGGGTCGCAGCTTTGGGCCCTTTGTCTCT GGCGGCCTCTTTTCCCTGTCCCTCGATGTGCGGCCCAAGGGCGAGGCTCTCGCGTGGAGTGTCTTTGGAGGGCTT GCACTAGCCGGCTGGATCTGTTCGCTCTTCATCCGCGGCGACGGTCTGGAGAGCGAGGATCTGGACGGCGACGAC GAGTCGGAAGATGGCCATGGCCGCGCCTGA |
| Transcript | >Ophcf2|02411 ATGGCCCGCGCCCAGGGCGGCCCGCGTCGGCCCAGCTCCGGCCCCGCCTGCCGGACGCTGTCCTCCGGCTCGTTC CACGCCGGGGCGCCCATTCCGACGCTGGCGGGCTTCCGGCGGGCCTCGACGCATCGTTATCAGACTTTTCCCGCG AGCGTGGCGCCGCCGGCTGAGGCTGAGGCTGAGGCTGGTGGTGATGACGATGATGACGACAACGACAACGACGAT GATGACGACGATGGGGCTGGGGGTAGCTCCAGCGACGGTTCCTCGCACGAGCACCAGCAGACTCCTCTCCCCGTC CGCCAGCTCCTCCTACTAGCCTTTCTCTCTCTCGCCGAGCAGACGGCCCTCAATTCCATCTCGCCTTACCTCCCG CGCATGGTAGCCTCGACGCCCGGTATCCCTCCGGGCCAGATCGGGCTGTACGTCGGTATCCTGGCCAGTGCCTTT GCCCTGGCTCAGCTCTCGACCAACTTTCTCTGGGGCTACGCCTCTGATGTCGTCGGTCGTAAGCCCGTGCTTCTG GCTGGCACTGCGTCATTGGCTGGCTGTTTTGCCCTCTTTGGACTGTGTCGGCAATACTGGCATATTGTTGTCGTT CACGTTGCCATGGGGCTGCTCAATGGGAACGCCGCCTGCGTGCCTACTGTTCTCGGCGAAGTGACTGACCGGTCG AATCAGAGCAAGGCTTTTACCTACCTGCCCGTCATCTACTCCATAGGCGGCATCACTGGTCCGGCCCTCGGCGGC TTGTTGGTCGGCCACATAGTGCCGAGTCACCCGTACCTTGCGCCCAACGTCTGCGCTGCCGTCCTACTCGCCGTC AGTGTCGCCGTCGTCGCCCTCTGGTTTGAGGAGACGCTTGAAGAGGATGACGAGGAGGCGGGACCGTGGGAACCC GTCTTCCTCCATCGTGTCTCGTCTTGGCTGCGTTCCAAGTTTCGTCCCGAGACGAGCAACGGTTCTCGTTCCTGG AGCTCGCGCTGGCCGCATGCTCAGACGACGGACCAGCGCAGGCCCTTGCTATCGCCGAATTCGTCTCTCTCGTCT TCTTCCGCCGACGATGACCACCATGTCCAAGACGGCATACCCTCCTCCAAGGCTGCTGTCCAGACAAAGGGTCCC GCCTGGCGGGATCTCCTGAACCACACGACGCTCCTCCTTCTCTCCACCTACCTCGTCTTTCAGCTGTCCAACATC AGCTTCAACAGCCTGTACCCCATCTTCGCCGCTGCACCTGCACCGGCGGGCCGCGAGTTGGACCCCGGCAAGATC GGAGTCAGCCTTAGCTTCGCCGGTCTGGCCACCATTCTATTCCAGGCCTTCTTCTACCAGCCGCTCAAGGCCAGG ACCGGGAGCCTCGGCGCGTACCGCCTGTCGCTGCTGGGCATAGCCATCAGCATGGTTCTCATGCCCTGGGTGGGC TATCTCGACGATGAGCCGCTGTTTGGCATTGGCAGCGGCCGTCTTGGGCTCTATGCACAGCTCGGCCTTGTTTTG GTTTTGAAGAATGTTTGCGCTGTTGGCGGCCTTTCGAGCGTCATGCTTCTGATCACCAACTCAGCCCCGTCGCAC GCCAGCCTCGGCACACTCAACGGCGTGGCCCAAACGCTGTCGGCGCTGGGTCGCAGCTTTGGGCCCTTTGTCTCT GGCGGCCTCTTTTCCCTGTCCCTCGATGTGCGGCCCAAGGGCGAGGCTCTCGCGTGGAGTGTCTTTGGAGGGCTT GCACTAGCCGGCTGGATCTGTTCGCTCTTCATCCGCGGCGACGGTCTGGAGAGCGAGGATCTGGACGGCGACGAC GAGTCGGAAGATGGCCATGGCCGCGCCTGA |
| Gene | >Ophcf2|02411 ATGGCCCGCGCCCAGGGCGGCCCGCGTCGGCCCAGCTCCGGCCCCGCCTGCCGGACGCTGTCCTCCGGCTCGTTC CACGCCGGGGCGCCCATTCCGACGCTGGCGGGCTTCCGGCGGGCCTCGACGCATCGTTATCAGACTTTTCCCGCG AGCGTGGCGCCGCCGGCTGAGGCTGAGGCTGAGGCTGGTGGTGATGACGATGATGACGACAACGACAACGACGAT GATGACGACGATGGGGCTGGGGGTAGCTCCAGCGACGGTTCCTCGCACGAGCACCAGCAGACTCCTCTCCCCGTC CGCCAGCTCCTCCTACTAGCCTTTCTCTCTCTCGCCGAGCAGACGGCCCTCAATTCCATCTCGCCTTACCTCCCG CGCATGGTAGCCTCGACGCCCGGTATCCCTCCGGGCCAGATCGGGCTGTACGTCGGTATCCTGGCCAGTGCCTTT GCCCTGGCTCAGCTCTCGACCAACTTTCTCTGGGGCTACGCCTCTGATGTCGTCGGTCGTAAGCCCGTGCTTCTG GCTGGCACTGCGTCATTGGCTGGCTGTTTTGCCCTCTTTGGACTGTGTCGGCAATACTGGCATATTGTTGTCGTT CACGTTGCCATGGGGCTGCTCAATGGGAACGCCGCCTGCGTGCCTACTGTTCTCGGCGAAGTGACTGACCGGTCG AATCAGAGCAAGGCTTTTACCTACCTGCCCGTCATCTACTCCATAGGCGGCATCACTGGTCCGGCCCTCGGCGGC TTGTTGGTCGGCCACATAGTGCCGAGTCACCCGTACCTTGCGCCCAACGTCTGCGCTGCCGTCCTACTCGCCGTC AGTGTCGCCGTCGTCGCCCTCTGGTTTGAGGAGACGCTTGAAGAGGATGACGAGGAGGCGGGACCGTGGGAACCC GTCTTCCTCCATCGTGTCTCGTCTTGGCTGCGTTCCAAGTTTCGTCCCGAGACGAGCAACGGTTCTCGTTCCTGG AGCTCGCGCTGGCCGCATGCTCAGACGACGGACCAGCGCAGGCCCTTGCTATCGCCGAATTCGTCTCTCTCGTCT TCTTCCGCCGACGATGACCACCATGTCCAAGACGGCATACCCTCCTCCAAGGCTGCTGTCCAGACAAAGGGTCCC GCCTGGCGGGATCTCCTGAACCACACGACGCTCCTCCTTCTCTCCACCTACCTCGTCTTTCAGCTGTCCAACATC AGCTTCAACAGCCTGTACCCCATCTTCGCCGCTGCACCTGCACCGGCGGGCCGCGAGTTGGACCCCGGCAAGATC GGAGTCAGCCTTAGCTTCGCCGGTCTGGCCACCATTCTATTCCAGGCCTTCTTCTACCAGCCGCTCAAGGCCAGG ACCGGGAGCCTCGGCGCGTACCGCCTGTCGCTGCTGGGCATAGCCATCAGCATGGTTCTCATGCCCTGGGTGGGC TATCTCGACGATGAGCCGCTGTTTGGCATTGGCAGCGGCCGTCTTGGGCTCTATGCACAGCTCGGCCTTGTTTTG GTTTTGAAGAATGTTTGCGCTGTTGGCGGCCTTTCGAGCGTCATGCTTCTGGTACGGCGTGCCATCTTTCCCGAT CTCCTCTTTACCTGGCTGACACGTTTCCAGATCACCAACTCAGCCCCGTCGCACGCCAGCCTCGGCACACTCAAC GGCGTGGCCCAAACGCTGTCGGCGCTGGGTCGCAGCTTTGGGCCCTTTGTCTCTGGCGGCCTCTTTTCCCTGTCC CTCGATGTGCGGCCCAAGGGCGAGGCTCTCGCGTGGAGTGTCTTTGGAGGGCTTGCACTAGCCGGCTGGATCTGT TCGCTCTTCATCCGCGGCGACGGTCTGGAGAGCGAGGATCTGGACGGCGACGACGAGTCGGAAGATGGCCATGGC CGCGCCTGA |