Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02410
Gene name
Locationscaffold_02:3672063..3672423
Strand+
Gene length (bp)360
Transcript length (bp)360
Coding sequence length (bp)360
Protein length (aa) 120

Overview

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PFAM Domains

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5734 0.431 0.1273 0.1941 0.3738 0.0126 0.0972 0.1778 0.1612 0.0362

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup5056
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|982
Ophiocordyceps australis map64 (Brazil) OphauB2|2800
Ophiocordyceps camponoti-floridani Ophcf2|02410 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|6753
Ophiocordyceps kimflemingae Ophio5|4510
Ophiocordyceps subramaniannii Hirsu2|276

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02410
MTNAWRYYVTSNQLITELQGLTPNYHFSNAVVSEAYRRVQRDPNSNRSWNLAWLCLQKIKDDDLIAAYAPLEAAK
PTMWASTRPSPQEKAQLTAYFEGEWTAAVNTMLRHWQRAPVSFH*
Coding >Ophcf2|02410
ATGACAAACGCATGGAGGTATTACGTGACGAGCAACCAGCTCATCACCGAACTTCAAGGCCTCACGCCCAATTAC
CACTTCAGCAACGCCGTCGTGTCCGAGGCCTACCGCCGCGTCCAAAGGGACCCCAACAGCAACCGCAGCTGGAAC
CTGGCCTGGCTCTGCTTGCAAAAGATCAAGGATGACGACCTCATCGCCGCCTACGCGCCTTTAGAGGCCGCCAAG
CCCACCATGTGGGCTTCTACCAGGCCTAGTCCCCAGGAGAAGGCCCAGTTGACGGCTTATTTTGAGGGGGAATGG
ACCGCGGCTGTCAATACGATGCTGAGGCATTGGCAGCGAGCGCCGGTTTCTTTCCATTAG
Transcript >Ophcf2|02410
ATGACAAACGCATGGAGGTATTACGTGACGAGCAACCAGCTCATCACCGAACTTCAAGGCCTCACGCCCAATTAC
CACTTCAGCAACGCCGTCGTGTCCGAGGCCTACCGCCGCGTCCAAAGGGACCCCAACAGCAACCGCAGCTGGAAC
CTGGCCTGGCTCTGCTTGCAAAAGATCAAGGATGACGACCTCATCGCCGCCTACGCGCCTTTAGAGGCCGCCAAG
CCCACCATGTGGGCTTCTACCAGGCCTAGTCCCCAGGAGAAGGCCCAGTTGACGGCTTATTTTGAGGGGGAATGG
ACCGCGGCTGTCAATACGATGCTGAGGCATTGGCAGCGAGCGCCGGTTTCTTTCCATTAG
Gene >Ophcf2|02410
ATGACAAACGCATGGAGGTATTACGTGACGAGCAACCAGCTCATCACCGAACTTCAAGGCCTCACGCCCAATTAC
CACTTCAGCAACGCCGTCGTGTCCGAGGCCTACCGCCGCGTCCAAAGGGACCCCAACAGCAACCGCAGCTGGAAC
CTGGCCTGGCTCTGCTTGCAAAAGATCAAGGATGACGACCTCATCGCCGCCTACGCGCCTTTAGAGGCCGCCAAG
CCCACCATGTGGGCTTCTACCAGGCCTAGTCCCCAGGAGAAGGCCCAGTTGACGGCTTATTTTGAGGGGGAATGG
ACCGCGGCTGTCAATACGATGCTGAGGCATTGGCAGCGAGCGCCGGTTTCTTTCCATTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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