Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02392
Gene name
Locationscaffold_02:3531847..3532738
Strand-
Gene length (bp)891
Transcript length (bp)891
Coding sequence length (bp)891
Protein length (aa) 297

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 4.3E-35 6 191
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 1.3E-25 15 193

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02392
MASKRTILITGCSDGSLGCALALAFHRADWRVLASGRNMAKLKQVEAAGLKTVQLDTTSDESIAAAVSHVGDLTG
GSLDVLLNNAGAGYSMPIMDLDIARARQLFDLNVFSIIAVTRAFFPLLSQSSHGGTVVNNTSCSSAIVGALPFAG
AYNASKAAAANLTEVMRLELAPFGIRVINLMTGSVKSTFHDNAPRTTLPPDSLYNLAKETVEKTMSGQEATATGA
DPTKWAQQVVGDLSKSNPPHWLWRGKHAALVRFASFLPVGFLDSTVKSMVGLDIVERKVREQGGATKLKPA*
Coding >Ophcf2|02392
ATGGCCTCGAAGCGAACCATCCTCATCACCGGCTGCTCCGATGGCAGCCTTGGCTGTGCCCTCGCTCTCGCCTTT
CACAGGGCCGACTGGCGCGTGCTGGCTTCGGGTCGTAACATGGCCAAGCTGAAGCAGGTCGAGGCCGCCGGTCTG
AAGACGGTCCAGCTTGACACCACGTCGGACGAGTCCATCGCCGCCGCCGTCTCTCACGTCGGCGACTTGACGGGC
GGCTCGCTCGATGTGCTCCTCAACAACGCCGGCGCTGGCTACTCCATGCCCATCATGGACCTCGACATCGCCCGC
GCCCGCCAGCTGTTCGATCTCAACGTCTTCTCCATCATCGCCGTCACCCGGGCCTTCTTCCCGCTGCTCAGCCAG
TCCTCGCACGGCGGGACCGTCGTCAACAATACCTCGTGCTCGTCTGCCATCGTCGGTGCCCTGCCCTTTGCTGGA
GCCTACAACGCGTCCAAGGCGGCGGCGGCCAACCTCACCGAAGTCATGCGCCTCGAGCTCGCCCCCTTCGGCATC
AGAGTCATCAACCTCATGACTGGCTCCGTCAAGTCCACCTTTCACGACAACGCCCCCCGGACCACGCTGCCGCCA
GATTCGCTGTACAACCTGGCCAAGGAGACGGTGGAGAAGACCATGTCAGGCCAAGAGGCGACAGCCACCGGTGCC
GATCCAACCAAATGGGCCCAACAGGTTGTCGGCGACCTCAGCAAATCCAACCCTCCTCACTGGCTGTGGCGTGGC
AAGCACGCAGCTCTGGTGCGTTTCGCTTCCTTCTTGCCCGTCGGCTTCCTGGACAGCACGGTCAAGAGCATGGTG
GGCCTGGACATTGTCGAGCGCAAGGTTCGAGAACAGGGAGGGGCGACCAAGCTGAAGCCTGCCTGA
Transcript >Ophcf2|02392
ATGGCCTCGAAGCGAACCATCCTCATCACCGGCTGCTCCGATGGCAGCCTTGGCTGTGCCCTCGCTCTCGCCTTT
CACAGGGCCGACTGGCGCGTGCTGGCTTCGGGTCGTAACATGGCCAAGCTGAAGCAGGTCGAGGCCGCCGGTCTG
AAGACGGTCCAGCTTGACACCACGTCGGACGAGTCCATCGCCGCCGCCGTCTCTCACGTCGGCGACTTGACGGGC
GGCTCGCTCGATGTGCTCCTCAACAACGCCGGCGCTGGCTACTCCATGCCCATCATGGACCTCGACATCGCCCGC
GCCCGCCAGCTGTTCGATCTCAACGTCTTCTCCATCATCGCCGTCACCCGGGCCTTCTTCCCGCTGCTCAGCCAG
TCCTCGCACGGCGGGACCGTCGTCAACAATACCTCGTGCTCGTCTGCCATCGTCGGTGCCCTGCCCTTTGCTGGA
GCCTACAACGCGTCCAAGGCGGCGGCGGCCAACCTCACCGAAGTCATGCGCCTCGAGCTCGCCCCCTTCGGCATC
AGAGTCATCAACCTCATGACTGGCTCCGTCAAGTCCACCTTTCACGACAACGCCCCCCGGACCACGCTGCCGCCA
GATTCGCTGTACAACCTGGCCAAGGAGACGGTGGAGAAGACCATGTCAGGCCAAGAGGCGACAGCCACCGGTGCC
GATCCAACCAAATGGGCCCAACAGGTTGTCGGCGACCTCAGCAAATCCAACCCTCCTCACTGGCTGTGGCGTGGC
AAGCACGCAGCTCTGGTGCGTTTCGCTTCCTTCTTGCCCGTCGGCTTCCTGGACAGCACGGTCAAGAGCATGGTG
GGCCTGGACATTGTCGAGCGCAAGGTTCGAGAACAGGGAGGGGCGACCAAGCTGAAGCCTGCCTGA
Gene >Ophcf2|02392
ATGGCCTCGAAGCGAACCATCCTCATCACCGGCTGCTCCGATGGCAGCCTTGGCTGTGCCCTCGCTCTCGCCTTT
CACAGGGCCGACTGGCGCGTGCTGGCTTCGGGTCGTAACATGGCCAAGCTGAAGCAGGTCGAGGCCGCCGGTCTG
AAGACGGTCCAGCTTGACACCACGTCGGACGAGTCCATCGCCGCCGCCGTCTCTCACGTCGGCGACTTGACGGGC
GGCTCGCTCGATGTGCTCCTCAACAACGCCGGCGCTGGCTACTCCATGCCCATCATGGACCTCGACATCGCCCGC
GCCCGCCAGCTGTTCGATCTCAACGTCTTCTCCATCATCGCCGTCACCCGGGCCTTCTTCCCGCTGCTCAGCCAG
TCCTCGCACGGCGGGACCGTCGTCAACAATACCTCGTGCTCGTCTGCCATCGTCGGTGCCCTGCCCTTTGCTGGA
GCCTACAACGCGTCCAAGGCGGCGGCGGCCAACCTCACCGAAGTCATGCGCCTCGAGCTCGCCCCCTTCGGCATC
AGAGTCATCAACCTCATGACTGGCTCCGTCAAGTCCACCTTTCACGACAACGCCCCCCGGACCACGCTGCCGCCA
GATTCGCTGTACAACCTGGCCAAGGAGACGGTGGAGAAGACCATGTCAGGCCAAGAGGCGACAGCCACCGGTGCC
GATCCAACCAAATGGGCCCAACAGGTTGTCGGCGACCTCAGCAAATCCAACCCTCCTCACTGGCTGTGGCGTGGC
AAGCACGCAGCTCTGGTGCGTTTCGCTTCCTTCTTGCCCGTCGGCTTCCTGGACAGCACGGTCAAGAGCATGGTG
GGCCTGGACATTGTCGAGCGCAAGGTTCGAGAACAGGGAGGGGCGACCAAGCTGAAGCCTGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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