© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|02392 |
| Gene name | |
| Location | scaffold_02:3531847..3532738 |
| Strand | - |
| Gene length (bp) | 891 |
| Transcript length (bp) | 891 |
| Coding sequence length (bp) | 891 |
| Protein length (aa) | 297 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00106 | adh_short | short chain dehydrogenase | 4.3E-35 | 6 | 191 |
| PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 1.3E-25 | 15 | 193 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mitochondrion | Peroxisomal targeting signal | 0.289 | 0.1946 | 0.093 | 0.053 | 0.5586 | 0.0374 | 0.5462 | 0.2419 | 0.1779 | 0.2144 |
| Gene cluster ID | Type of secondary metabolism gene |
|---|---|
| Cluster 9 | Decorating |
| Orthofinder run ID | 4 |
| Orthogroup | 7310 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-floridani | Ophcf2|02392 (this protein) |
| Ophiocordyceps camponoti-rufipedis | Ophun1|838 |
| Ophiocordyceps kimflemingae | Ophio5|4424 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|02392 MASKRTILITGCSDGSLGCALALAFHRADWRVLASGRNMAKLKQVEAAGLKTVQLDTTSDESIAAAVSHVGDLTG GSLDVLLNNAGAGYSMPIMDLDIARARQLFDLNVFSIIAVTRAFFPLLSQSSHGGTVVNNTSCSSAIVGALPFAG AYNASKAAAANLTEVMRLELAPFGIRVINLMTGSVKSTFHDNAPRTTLPPDSLYNLAKETVEKTMSGQEATATGA DPTKWAQQVVGDLSKSNPPHWLWRGKHAALVRFASFLPVGFLDSTVKSMVGLDIVERKVREQGGATKLKPA* |
| Coding | >Ophcf2|02392 ATGGCCTCGAAGCGAACCATCCTCATCACCGGCTGCTCCGATGGCAGCCTTGGCTGTGCCCTCGCTCTCGCCTTT CACAGGGCCGACTGGCGCGTGCTGGCTTCGGGTCGTAACATGGCCAAGCTGAAGCAGGTCGAGGCCGCCGGTCTG AAGACGGTCCAGCTTGACACCACGTCGGACGAGTCCATCGCCGCCGCCGTCTCTCACGTCGGCGACTTGACGGGC GGCTCGCTCGATGTGCTCCTCAACAACGCCGGCGCTGGCTACTCCATGCCCATCATGGACCTCGACATCGCCCGC GCCCGCCAGCTGTTCGATCTCAACGTCTTCTCCATCATCGCCGTCACCCGGGCCTTCTTCCCGCTGCTCAGCCAG TCCTCGCACGGCGGGACCGTCGTCAACAATACCTCGTGCTCGTCTGCCATCGTCGGTGCCCTGCCCTTTGCTGGA GCCTACAACGCGTCCAAGGCGGCGGCGGCCAACCTCACCGAAGTCATGCGCCTCGAGCTCGCCCCCTTCGGCATC AGAGTCATCAACCTCATGACTGGCTCCGTCAAGTCCACCTTTCACGACAACGCCCCCCGGACCACGCTGCCGCCA GATTCGCTGTACAACCTGGCCAAGGAGACGGTGGAGAAGACCATGTCAGGCCAAGAGGCGACAGCCACCGGTGCC GATCCAACCAAATGGGCCCAACAGGTTGTCGGCGACCTCAGCAAATCCAACCCTCCTCACTGGCTGTGGCGTGGC AAGCACGCAGCTCTGGTGCGTTTCGCTTCCTTCTTGCCCGTCGGCTTCCTGGACAGCACGGTCAAGAGCATGGTG GGCCTGGACATTGTCGAGCGCAAGGTTCGAGAACAGGGAGGGGCGACCAAGCTGAAGCCTGCCTGA |
| Transcript | >Ophcf2|02392 ATGGCCTCGAAGCGAACCATCCTCATCACCGGCTGCTCCGATGGCAGCCTTGGCTGTGCCCTCGCTCTCGCCTTT CACAGGGCCGACTGGCGCGTGCTGGCTTCGGGTCGTAACATGGCCAAGCTGAAGCAGGTCGAGGCCGCCGGTCTG AAGACGGTCCAGCTTGACACCACGTCGGACGAGTCCATCGCCGCCGCCGTCTCTCACGTCGGCGACTTGACGGGC GGCTCGCTCGATGTGCTCCTCAACAACGCCGGCGCTGGCTACTCCATGCCCATCATGGACCTCGACATCGCCCGC GCCCGCCAGCTGTTCGATCTCAACGTCTTCTCCATCATCGCCGTCACCCGGGCCTTCTTCCCGCTGCTCAGCCAG TCCTCGCACGGCGGGACCGTCGTCAACAATACCTCGTGCTCGTCTGCCATCGTCGGTGCCCTGCCCTTTGCTGGA GCCTACAACGCGTCCAAGGCGGCGGCGGCCAACCTCACCGAAGTCATGCGCCTCGAGCTCGCCCCCTTCGGCATC AGAGTCATCAACCTCATGACTGGCTCCGTCAAGTCCACCTTTCACGACAACGCCCCCCGGACCACGCTGCCGCCA GATTCGCTGTACAACCTGGCCAAGGAGACGGTGGAGAAGACCATGTCAGGCCAAGAGGCGACAGCCACCGGTGCC GATCCAACCAAATGGGCCCAACAGGTTGTCGGCGACCTCAGCAAATCCAACCCTCCTCACTGGCTGTGGCGTGGC AAGCACGCAGCTCTGGTGCGTTTCGCTTCCTTCTTGCCCGTCGGCTTCCTGGACAGCACGGTCAAGAGCATGGTG GGCCTGGACATTGTCGAGCGCAAGGTTCGAGAACAGGGAGGGGCGACCAAGCTGAAGCCTGCCTGA |
| Gene | >Ophcf2|02392 ATGGCCTCGAAGCGAACCATCCTCATCACCGGCTGCTCCGATGGCAGCCTTGGCTGTGCCCTCGCTCTCGCCTTT CACAGGGCCGACTGGCGCGTGCTGGCTTCGGGTCGTAACATGGCCAAGCTGAAGCAGGTCGAGGCCGCCGGTCTG AAGACGGTCCAGCTTGACACCACGTCGGACGAGTCCATCGCCGCCGCCGTCTCTCACGTCGGCGACTTGACGGGC GGCTCGCTCGATGTGCTCCTCAACAACGCCGGCGCTGGCTACTCCATGCCCATCATGGACCTCGACATCGCCCGC GCCCGCCAGCTGTTCGATCTCAACGTCTTCTCCATCATCGCCGTCACCCGGGCCTTCTTCCCGCTGCTCAGCCAG TCCTCGCACGGCGGGACCGTCGTCAACAATACCTCGTGCTCGTCTGCCATCGTCGGTGCCCTGCCCTTTGCTGGA GCCTACAACGCGTCCAAGGCGGCGGCGGCCAACCTCACCGAAGTCATGCGCCTCGAGCTCGCCCCCTTCGGCATC AGAGTCATCAACCTCATGACTGGCTCCGTCAAGTCCACCTTTCACGACAACGCCCCCCGGACCACGCTGCCGCCA GATTCGCTGTACAACCTGGCCAAGGAGACGGTGGAGAAGACCATGTCAGGCCAAGAGGCGACAGCCACCGGTGCC GATCCAACCAAATGGGCCCAACAGGTTGTCGGCGACCTCAGCAAATCCAACCCTCCTCACTGGCTGTGGCGTGGC AAGCACGCAGCTCTGGTGCGTTTCGCTTCCTTCTTGCCCGTCGGCTTCCTGGACAGCACGGTCAAGAGCATGGTG GGCCTGGACATTGTCGAGCGCAAGGTTCGAGAACAGGGAGGGGCGACCAAGCTGAAGCCTGCCTGA |