Protein ID | Ophcf2|02388 |
Gene name | |
Location | scaffold_02:3524222..3525536 |
Strand | - |
Gene length (bp) | 1314 |
Transcript length (bp) | 1254 |
Coding sequence length (bp) | 1254 |
Protein length (aa) | 418 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 1.5E-14 | 57 | 230 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005615 | extracellular space | Yes |
GO:0090729 | toxin activity | Yes |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
GO:0110165 | cellular anatomical entity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1515 | 0.0832 | 0.8535 | 0.1287 | 0.0644 | 0.0222 | 0.469 | 0.3015 | 0.2248 | 0.0026 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 24 | 0.999677 |
Orthofinder run ID | 4 |
Orthogroup | 589 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|02388 MMLHHTRPYLALLLLAGSYLTVSGFETDESSFQHEEAATEEGVSSNPPPKPRRENIVYHVGTGSLHEVHDNRGIW PREMSRNDMFRLPDTTSMHKHVLNSVHPGTGDRYGYISTTANYTEALEWLNTYTDGYIYEIHATPNFINVDQTLL QFNHQRSSPVSQDEFAALGGIHAFQIIGCRWVRHIEAPRQGKRIAISNDIPNPEYDPNRVANKGWVGGKPELAGF SRSHDSRVEGLGPWCQGRCPFVEPVQRASHYLASVIDLERDSIKLHFRLSKNAWAGSDDKIQMQFGASNYMTVFR KSNPGDQWHGTVDPGLFEGIDLNLGMIANISILTLPGTQWLRDRFEVDGFFLEAKTYYGDWIEMKRYDHFGRKLK GEDNRRTIVWSDVVELKDWKRIPGNRPQHIARDDLYRQGTRW* |
Coding | >Ophcf2|02388 ATGATGCTTCATCACACACGCCCCTACCTCGCCCTCCTCCTCTTAGCAGGCTCATACCTCACCGTCTCCGGCTTC GAAACCGACGAATCCTCCTTTCAGCACGAAGAAGCCGCTACCGAAGAGGGTGTCAGCAGCAACCCTCCTCCCAAG CCCCGTCGCGAGAACATCGTCTACCACGTCGGCACCGGCTCGCTCCATGAAGTGCACGACAACCGCGGCATCTGG CCGCGAGAGATGTCAAGGAACGACATGTTCAGGCTTCCAGACACGACGAGCATGCACAAACACGTCCTCAACAGC GTACACCCAGGAACAGGAGACCGCTACGGTTACATCTCCACGACGGCAAACTACACCGAGGCCCTCGAGTGGCTC AACACTTATACCGACGGCTACATCTACGAGATCCACGCGACGCCCAACTTCATCAACGTAGACCAGACATTGCTG CAGTTCAACCACCAAAGGAGCTCTCCCGTCAGTCAAGACGAGTTCGCCGCACTTGGAGGGATCCACGCCTTTCAA ATCATAGGCTGCAGATGGGTTCGACACATCGAGGCACCGCGCCAGGGGAAAAGGATCGCCATCAGCAACGACATC CCCAACCCAGAGTACGACCCGAACCGAGTCGCAAACAAGGGTTGGGTCGGCGGCAAGCCAGAACTCGCCGGTTTC TCGCGCAGTCACGATTCCCGGGTGGAAGGCTTGGGCCCCTGGTGCCAAGGACGCTGCCCGTTTGTCGAGCCCGTT CAGAGGGCCTCCCACTACCTGGCGTCGGTGATAGATCTCGAACGCGACTCCATCAAGCTTCACTTCCGCCTCTCC AAGAACGCCTGGGCCGGCTCGGATGACAAGATACAGATGCAGTTTGGAGCCAGCAACTACATGACCGTCTTCCGC AAGTCCAATCCCGGCGATCAGTGGCACGGCACCGTCGACCCCGGCCTGTTCGAAGGCATCGATCTGAATCTAGGC ATGATTGCTAACATCAGCATCCTGACCCTGCCTGGCACTCAGTGGCTCAGGGACAGGTTCGAAGTGGACGGATTC TTCCTCGAGGCCAAGACATATTACGGCGACTGGATCGAGATGAAGAGGTATGACCACTTCGGCCGCAAGTTGAAG GGCGAGGATAATAGGAGGACTATTGTCTGGTCCGACGTGGTGGAGCTGAAGGACTGGAAGAGAATCCCGGGGAAC CGACCACAACACATCGCTCGGGATGACTTGTATCGTCAGGGTACGCGTTGGTAG |
Transcript | >Ophcf2|02388 ATGATGCTTCATCACACACGCCCCTACCTCGCCCTCCTCCTCTTAGCAGGCTCATACCTCACCGTCTCCGGCTTC GAAACCGACGAATCCTCCTTTCAGCACGAAGAAGCCGCTACCGAAGAGGGTGTCAGCAGCAACCCTCCTCCCAAG CCCCGTCGCGAGAACATCGTCTACCACGTCGGCACCGGCTCGCTCCATGAAGTGCACGACAACCGCGGCATCTGG CCGCGAGAGATGTCAAGGAACGACATGTTCAGGCTTCCAGACACGACGAGCATGCACAAACACGTCCTCAACAGC GTACACCCAGGAACAGGAGACCGCTACGGTTACATCTCCACGACGGCAAACTACACCGAGGCCCTCGAGTGGCTC AACACTTATACCGACGGCTACATCTACGAGATCCACGCGACGCCCAACTTCATCAACGTAGACCAGACATTGCTG CAGTTCAACCACCAAAGGAGCTCTCCCGTCAGTCAAGACGAGTTCGCCGCACTTGGAGGGATCCACGCCTTTCAA ATCATAGGCTGCAGATGGGTTCGACACATCGAGGCACCGCGCCAGGGGAAAAGGATCGCCATCAGCAACGACATC CCCAACCCAGAGTACGACCCGAACCGAGTCGCAAACAAGGGTTGGGTCGGCGGCAAGCCAGAACTCGCCGGTTTC TCGCGCAGTCACGATTCCCGGGTGGAAGGCTTGGGCCCCTGGTGCCAAGGACGCTGCCCGTTTGTCGAGCCCGTT CAGAGGGCCTCCCACTACCTGGCGTCGGTGATAGATCTCGAACGCGACTCCATCAAGCTTCACTTCCGCCTCTCC AAGAACGCCTGGGCCGGCTCGGATGACAAGATACAGATGCAGTTTGGAGCCAGCAACTACATGACCGTCTTCCGC AAGTCCAATCCCGGCGATCAGTGGCACGGCACCGTCGACCCCGGCCTGTTCGAAGGCATCGATCTGAATCTAGGC ATGATTGCTAACATCAGCATCCTGACCCTGCCTGGCACTCAGTGGCTCAGGGACAGGTTCGAAGTGGACGGATTC TTCCTCGAGGCCAAGACATATTACGGCGACTGGATCGAGATGAAGAGGTATGACCACTTCGGCCGCAAGTTGAAG GGCGAGGATAATAGGAGGACTATTGTCTGGTCCGACGTGGTGGAGCTGAAGGACTGGAAGAGAATCCCGGGGAAC CGACCACAACACATCGCTCGGGATGACTTGTATCGTCAGGGTACGCGTTGGTAG |
Gene | >Ophcf2|02388 ATGATGCTTCATCACACACGCCCCTACCTCGCCCTCCTCCTCTTAGCAGGCTCATACCTCACCGTCTCCGGCTTC GAAACCGACGAATCCTCCTTTCAGCACGAAGAAGCCGCTACCGAAGAGGGTGTCAGCAGCAACCCTCCTCCCAAG CCCCGTCGCGAGAACATCGTCTACCACGTCGGCACCGGCTCGCTCCATGAAGTGCACGACAACCGCGGCATCTGG CCGCGAGAGATGTCAAGGAACGACATGTTCAGGCTTCCAGACACGACGAGCATGCACAAACACGTCCTCAACAGC GTACACCCAGGAACAGGAGACCGCTACGGTTACATCTCCACGACGGCAAACTACACCGAGGCCCTCGAGTGGCTC AACACTTATACCGACGGCTACATCTACGAGATCCACGCGACGCCCAACTTCATCAACGTAGACCAGACATTGCTG CAGTTCAACCACCAAAGGAGCTCTCCCGTCAGTCAAGACGAGTTCGCCGCACTTGGAGGGATCCACGCCTTTCAA ATCATAGGCTGCAGATGGGTTCGACACATCGAGGCACCGCGCCAGGGGAAAAGGATCGCCATCAGCAACGACATC CCCAACCCAGAGTACGACCCGAACCGAGTCGCAAACAAGGGTTGGGTCGGCGGCAAGCCAGAACTCGCCGGTTTC TCGCGCAGTCACGATTCCCGGGTGGAAGGCTTGGGCCCCTGGTGCCAAGGACGCTGCCCGTTTGTCGAGCCCGTT CAGAGGGCCTCCCACTACCTGGCGTCGGTGATAGATCTCGAACGCGACTCCATCAAGCTTCACTTCCGCCTCTCC AAGAACGCCTGGGCCGGCTCGGATGACAAGATACAGATGCAGTTTGGAGCCAGCAACTACATGACCGTCTTCCGC AAGTCCAATCCCGGCGATCAGTGGCACGGCACCGTCGACCCCGGCCTGTTCGAAGGCATCGATCTGAATCTAGGC ATGATTGCTAACATCAGCATCCTGACCCTGCCTGGCACTCAGTGGCTCAGGGACAGGTTCGAAGTGGACGGTATG TCCCCTCGTCTGCTTCCCTATGTATACCCTCTTTACTGACCATGTCCCGCTCCAGGATTCTTCCTCGAGGCCAAG ACATATTACGGCGACTGGATCGAGATGAAGAGGTATGACCACTTCGGCCGCAAGTTGAAGGGCGAGGATAATAGG AGGACTATTGTCTGGTCCGACGTGGTGGAGCTGAAGGACTGGAAGAGAATCCCGGGGAACCGACCACAACACATC GCTCGGGATGACTTGTATCGTCAGGGTACGCGTTGGTAG |