Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02383
Gene name
Locationscaffold_02:3506594..3507564
Strand-
Gene length (bp)970
Transcript length (bp)813
Coding sequence length (bp)813
Protein length (aa) 271

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01184 Gpr1_Fun34_YaaH GPR1/FUN34/yaaH family 6.6E-88 42 255

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 64 0.45

Transmembrane Domains

Domain # Start End Length
1 59 81 22
2 91 110 19
3 122 144 22
4 154 176 22
5 181 203 22
6 213 235 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02383
MSAENASRAPSLELEKEARSGAGPVHRHHHHDYSHMSAGPSAGALQPGLWKPYEHRKLANPAPLGLSAFALTTFV
LSAINMHARGVSQPNIVVSIAFGYGGLVQLLAGMWEFACGNTFGATAFSSYGGFWISYGIILTPSWGILSQEGPY
HGNVASPVGFFLTGWFIFTTLMLLCTLRSTVSFFLLFFFLDLAFLFLATEQYALDVGHKGLGLVLQKTGGAFGFA
AAFLAWYNALSGLQDSSNSFFQVPVLHFPWSDHVRERRKSDRSQA*
Coding >Ophcf2|02383
ATGTCAGCCGAAAACGCCAGCCGCGCTCCATCGCTAGAACTGGAAAAAGAAGCCCGCTCCGGCGCCGGCCCCGTC
CACCGCCATCACCATCACGATTACTCCCACATGTCGGCCGGTCCCAGCGCCGGCGCCCTCCAGCCGGGCCTATGG
AAGCCCTACGAGCATCGCAAGCTGGCCAATCCCGCGCCTCTCGGTCTCAGCGCCTTCGCCCTCACCACCTTCGTC
CTGTCCGCTATCAATATGCATGCCCGCGGCGTGTCTCAGCCAAACATCGTCGTCTCAATCGCCTTCGGCTACGGC
GGCCTCGTTCAGCTTCTCGCCGGCATGTGGGAGTTTGCCTGCGGTAACACATTCGGTGCCACCGCCTTCTCGTCA
TATGGCGGCTTCTGGATCTCGTACGGCATCATCCTCACCCCCTCCTGGGGCATCCTCTCCCAAGAGGGCCCCTAC
CACGGCAACGTCGCCAGCCCCGTCGGCTTCTTTCTCACCGGCTGGTTCATCTTCACCACCCTCATGCTGCTCTGC
ACCCTTCGTTCCACCGTCAGCTTCTTCCTCCTCTTCTTCTTCCTCGATCTGGCCTTCCTCTTCCTCGCCACCGAG
CAGTACGCCCTCGACGTCGGCCACAAGGGTCTCGGCCTCGTGCTGCAGAAGACGGGCGGCGCCTTCGGTTTCGCA
GCCGCTTTCCTGGCCTGGTATAACGCGCTGTCCGGACTCCAGGACAGCAGCAACTCGTTCTTCCAGGTGCCCGTC
CTGCACTTCCCCTGGTCCGATCACGTCCGCGAGCGCCGCAAAAGTGATCGCTCTCAGGCCTGA
Transcript >Ophcf2|02383
ATGTCAGCCGAAAACGCCAGCCGCGCTCCATCGCTAGAACTGGAAAAAGAAGCCCGCTCCGGCGCCGGCCCCGTC
CACCGCCATCACCATCACGATTACTCCCACATGTCGGCCGGTCCCAGCGCCGGCGCCCTCCAGCCGGGCCTATGG
AAGCCCTACGAGCATCGCAAGCTGGCCAATCCCGCGCCTCTCGGTCTCAGCGCCTTCGCCCTCACCACCTTCGTC
CTGTCCGCTATCAATATGCATGCCCGCGGCGTGTCTCAGCCAAACATCGTCGTCTCAATCGCCTTCGGCTACGGC
GGCCTCGTTCAGCTTCTCGCCGGCATGTGGGAGTTTGCCTGCGGTAACACATTCGGTGCCACCGCCTTCTCGTCA
TATGGCGGCTTCTGGATCTCGTACGGCATCATCCTCACCCCCTCCTGGGGCATCCTCTCCCAAGAGGGCCCCTAC
CACGGCAACGTCGCCAGCCCCGTCGGCTTCTTTCTCACCGGCTGGTTCATCTTCACCACCCTCATGCTGCTCTGC
ACCCTTCGTTCCACCGTCAGCTTCTTCCTCCTCTTCTTCTTCCTCGATCTGGCCTTCCTCTTCCTCGCCACCGAG
CAGTACGCCCTCGACGTCGGCCACAAGGGTCTCGGCCTCGTGCTGCAGAAGACGGGCGGCGCCTTCGGTTTCGCA
GCCGCTTTCCTGGCCTGGTATAACGCGCTGTCCGGACTCCAGGACAGCAGCAACTCGTTCTTCCAGGTGCCCGTC
CTGCACTTCCCCTGGTCCGATCACGTCCGCGAGCGCCGCAAAAGTGATCGCTCTCAGGCCTGA
Gene >Ophcf2|02383
ATGTCAGCCGAAAACGCCAGCCGCGCTCCATCGCTAGAACTGGAAAAAGAAGCCCGCTCCGGCGCCGGCCCCGTC
CACCGCCATCACCATCACGATTACTCCCACATGTCGGCCGGTCCCAGCGCCGGCGCCCTCCAGCCGGGCCTATGG
AAGCCCTACGAGCATCGCAAGCTGGCCAATCCCGCGCCTCTCGGTCTCAGCGCCTTCGCCCTCACCACCTTCGTC
CTGTCCGCTATCAATATGCATGCCCGCGGCGTGTCTCAGCCAAACATCGTCGTCTCAATCGCCTTCGGCTACGGC
GGCCTCGTTCAGCTTCTCGCCGGCATGTGGTGAGTCGCCCTAGTTTATCGTCTTGTCTCTCTCTCTCACCTTAGT
GTTTCCTCTTTTATCCTCTCATATATCTATACGTACTCAGATTCTGACCCCATTGACCAGGGAGTTTGCCTGCGG
TAACACATTCGGTGCCACCGCCTTCTCGTCATATGGCGGCTTCTGGATCTCGTACGGCATCATCCTCACCCCCTC
CTGGGGCATCCTCTCCCAAGAGGGCCCCTACCACGGCAACGTCGCCAGCCCCGTCGGCTTCTTTCTCACCGGCTG
GTTCATCTTCACCACCCTCATGCTGCTCTGCACCCTTCGTTCCACCGTCAGCTTCTTCCTCCTCTTCTTCTTCCT
CGATCTGGCCTTCCTCTTCCTCGCCACCGAGCAGTACGCCCTCGACGTCGGCCACAAGGGTCTCGGCCTCGTGCT
GCAGAAGACGGGCGGCGCCTTCGGTTTCGCAGCCGCTTTCCTGGCCTGGTATAACGCGCTGTCCGGACTCCAGGA
CAGCAGGTCAGTTGGCCCTGAACTCGGACCTTGTTCAGCAGACTGACTCTTCCGCAGCAACTCGTTCTTCCAGGT
GCCCGTCCTGCACTTCCCCTGGTCCGATCACGTCCGCGAGCGCCGCAAAAGTGATCGCTCTCAGGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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