Protein ID | Ophcf2|02379 |
Gene name | |
Location | scaffold_02:3495913..3497572 |
Strand | + |
Gene length (bp) | 1659 |
Transcript length (bp) | 1536 |
Coding sequence length (bp) | 1536 |
Protein length (aa) | 512 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF14308 | DnaJ-X | X-domain of DnaJ-containing | 4.3E-78 | 252 | 456 |
PF00226 | DnaJ | DnaJ domain | 1.3E-25 | 7 | 68 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 49 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|02379 MVFDTAYYDTLGVQPTATQLEIKKAYRKLAIVHHPDKNPNDPTAHEKFQAIGEAYQVLSDTDLRKAYDKFGKDQA KPSEGFADPAEFFSSIFGGEAFTDWIGEISLMKDLTATMDITMQAQEETDKDTSEDTEDDAATKQNNKEQKPAAD GSTAPGSPPKPPPVPPRNPASGVVVEEEKPADRRDTSSPASSSRTKTQIPLRQALTDKSHEDSLGEGNDEASLRQ KEKKKGGLTKEQREQLAAFEKERARVRKERVDTLSKKLLDRVSVWTETDKSNDVTRAFQEKMRLEVENLKMESFG IDILHAIGQTYVSKASALLRSQKFLGIGGFFSRLRDKGTLVKDTWSTISSAIDAQQTMEDMAKMEEKGGEDWTDE RRVEYERRVTGKILTAAWRGSKFEIQSVLREVCDSVLNDKKVSLSKRLERAQALVLIGDVFVKAKRSPEEEGDYL VFEQLVADAALKKDKDDERRKKDKKGRDGTHHQGHPHVHDGQGGPQPAEAATSDSAHTSKA* |
Coding | >Ophcf2|02379 ATGGTCTTCGACACGGCCTACTACGACACGTTGGGCGTCCAGCCGACTGCCACTCAGCTCGAGATCAAAAAGGCC TACCGCAAGCTGGCCATCGTCCATCATCCAGACAAAAACCCCAATGATCCGACAGCGCACGAAAAGTTCCAGGCC ATCGGCGAGGCATACCAAGTTCTCTCGGACACGGATCTGCGCAAAGCCTACGATAAGTTCGGCAAAGATCAAGCC AAACCCTCGGAAGGCTTCGCCGATCCGGCCGAGTTCTTCTCCTCCATCTTCGGCGGTGAGGCCTTTACCGACTGG ATAGGCGAAATCAGCCTCATGAAGGACCTGACGGCTACTATGGATATTACTATGCAAGCACAGGAGGAGACGGAC AAGGACACTTCCGAGGACACCGAAGATGATGCTGCCACGAAGCAGAACAACAAGGAGCAAAAGCCAGCGGCCGAC GGCTCGACGGCGCCTGGGTCGCCGCCCAAACCGCCGCCGGTACCACCGCGGAACCCGGCGTCGGGGGTCGTCGTG GAGGAAGAAAAGCCGGCAGACCGGCGCGATACCAGCTCGCCGGCCTCTAGCTCCCGGACCAAAACTCAGATACCG CTCCGGCAGGCCCTCACGGACAAGTCGCACGAAGACTCACTCGGCGAAGGCAACGACGAGGCCTCGCTAAGACAA AAGGAGAAGAAGAAGGGTGGACTGACCAAGGAGCAGCGCGAGCAGCTGGCGGCCTTTGAAAAGGAACGGGCCCGC GTACGCAAGGAGCGCGTCGACACGCTCTCCAAGAAACTCCTCGACCGCGTCAGCGTCTGGACCGAGACGGACAAG AGTAACGACGTGACGCGGGCTTTCCAGGAGAAGATGCGGCTCGAGGTCGAGAATCTCAAGATGGAATCGTTCGGC ATCGACATCCTCCACGCCATCGGGCAAACGTACGTGTCCAAGGCGTCGGCGCTGCTGCGATCGCAAAAGTTCCTC GGCATCGGCGGCTTCTTCAGCCGGCTGCGAGATAAGGGAACGCTCGTCAAGGACACATGGAGCACCATCAGCAGC GCCATCGACGCGCAGCAGACGATGGAGGACATGGCCAAGATGGAGGAGAAGGGCGGCGAGGACTGGACGGACGAG CGGCGGGTCGAGTACGAGCGCCGCGTGACGGGCAAGATCTTGACGGCGGCCTGGCGGGGAAGCAAGTTTGAGATA CAGAGCGTGCTGCGCGAGGTTTGCGACAGCGTGCTCAACGACAAGAAGGTCTCGCTGTCGAAGCGGTTAGAGCGC GCCCAGGCGCTGGTGCTCATCGGTGACGTCTTTGTCAAGGCAAAGCGCTCGCCCGAAGAAGAGGGCGACTATCTC GTCTTCGAGCAGCTCGTCGCCGACGCCGCGCTTAAGAAAGACAAGGACGACGAGAGGCGCAAAAAGGATAAGAAG GGACGGGACGGCACTCACCATCAAGGCCACCCACACGTCCACGATGGCCAAGGCGGCCCTCAGCCGGCCGAGGCG GCAACCTCCGACAGCGCTCACACCAGCAAGGCATAG |
Transcript | >Ophcf2|02379 ATGGTCTTCGACACGGCCTACTACGACACGTTGGGCGTCCAGCCGACTGCCACTCAGCTCGAGATCAAAAAGGCC TACCGCAAGCTGGCCATCGTCCATCATCCAGACAAAAACCCCAATGATCCGACAGCGCACGAAAAGTTCCAGGCC ATCGGCGAGGCATACCAAGTTCTCTCGGACACGGATCTGCGCAAAGCCTACGATAAGTTCGGCAAAGATCAAGCC AAACCCTCGGAAGGCTTCGCCGATCCGGCCGAGTTCTTCTCCTCCATCTTCGGCGGTGAGGCCTTTACCGACTGG ATAGGCGAAATCAGCCTCATGAAGGACCTGACGGCTACTATGGATATTACTATGCAAGCACAGGAGGAGACGGAC AAGGACACTTCCGAGGACACCGAAGATGATGCTGCCACGAAGCAGAACAACAAGGAGCAAAAGCCAGCGGCCGAC GGCTCGACGGCGCCTGGGTCGCCGCCCAAACCGCCGCCGGTACCACCGCGGAACCCGGCGTCGGGGGTCGTCGTG GAGGAAGAAAAGCCGGCAGACCGGCGCGATACCAGCTCGCCGGCCTCTAGCTCCCGGACCAAAACTCAGATACCG CTCCGGCAGGCCCTCACGGACAAGTCGCACGAAGACTCACTCGGCGAAGGCAACGACGAGGCCTCGCTAAGACAA AAGGAGAAGAAGAAGGGTGGACTGACCAAGGAGCAGCGCGAGCAGCTGGCGGCCTTTGAAAAGGAACGGGCCCGC GTACGCAAGGAGCGCGTCGACACGCTCTCCAAGAAACTCCTCGACCGCGTCAGCGTCTGGACCGAGACGGACAAG AGTAACGACGTGACGCGGGCTTTCCAGGAGAAGATGCGGCTCGAGGTCGAGAATCTCAAGATGGAATCGTTCGGC ATCGACATCCTCCACGCCATCGGGCAAACGTACGTGTCCAAGGCGTCGGCGCTGCTGCGATCGCAAAAGTTCCTC GGCATCGGCGGCTTCTTCAGCCGGCTGCGAGATAAGGGAACGCTCGTCAAGGACACATGGAGCACCATCAGCAGC GCCATCGACGCGCAGCAGACGATGGAGGACATGGCCAAGATGGAGGAGAAGGGCGGCGAGGACTGGACGGACGAG CGGCGGGTCGAGTACGAGCGCCGCGTGACGGGCAAGATCTTGACGGCGGCCTGGCGGGGAAGCAAGTTTGAGATA CAGAGCGTGCTGCGCGAGGTTTGCGACAGCGTGCTCAACGACAAGAAGGTCTCGCTGTCGAAGCGGTTAGAGCGC GCCCAGGCGCTGGTGCTCATCGGTGACGTCTTTGTCAAGGCAAAGCGCTCGCCCGAAGAAGAGGGCGACTATCTC GTCTTCGAGCAGCTCGTCGCCGACGCCGCGCTTAAGAAAGACAAGGACGACGAGAGGCGCAAAAAGGATAAGAAG GGACGGGACGGCACTCACCATCAAGGCCACCCACACGTCCACGATGGCCAAGGCGGCCCTCAGCCGGCCGAGGCG GCAACCTCCGACAGCGCTCACACCAGCAAGGCATAG |
Gene | >Ophcf2|02379 ATGGTCTTCGACACGGCCTACTACGACACGTTGGGCGTCCAGCCGACTGCCACTCAGCTCGAGATCAAAAAGGCC TACCGCAAGCTGGCCATCGTCCATCATCCAGGTCGATCTCCGATTCTCCTCTTCATCAGTCGCATGCCATGGCGC TGACCATGCCGTAGACAAAAACCCCAATGATCCGACAGCGCACGAAAAGTTCCAGGCCATCGGCGAGGCATACCA AGTTCTCTCGGACACGGATCTGCGCAAAGCCTACGATAAGTTCGGCAAAGATCAAGCCAAACCCTCGGAAGGCTT CGCCGATCCGGCCGAGTTCTTCTCCTCCATCTTCGGCGGTGAGGCCTTTACCGACTGGATAGGCGAAATCAGCCT CATGAAGGACCTGACGGCTACTATGGATATTACTATGCAAGCACAGGAGGAGACGGACAAGGACACTTCCGAGGA CACCGAAGATGATGCTGCCACGAAGCAGAACAACAAGGAGCAAAAGCCAGCGGCCGACGGCTCGACGGCGCCTGG GTCGCCGCCCAAACCGCCGCCGGTACCACCGCGGAACCCGGCGTCGGGGGTCGTCGTGGAGGAAGAAAAGCCGGC AGACCGGCGCGATACCAGCTCGCCGGCCTCTAGCTCCCGGACCAAAACTCAGATACCGCTCCGGCAGGCCCTCAC GGACAAGTCGCACGAAGACTCACTCGGCGAAGGCAACGACGAGGCCTCGCTAAGACAAAAGGAGAAGAAGAAGGG TGGACTGACCAAGGAGCAGCGCGAGCAGCTGGCGGCCTTTGAAAAGGAACGGGCCCGCGTACGCAAGGAGCGCGT CGACACGCTCTCCAAGAAACTCCTCGACCGCGTCAGCGTCTGGACCGAGACGGACAAGAGTAACGACGTGACGCG GGCTTTCCAGGAGAAGATGCGGCTCGAGGTCGAGAATCTCAAGATGGAATCGTTCGGCATCGACATCCTCCACGC CATCGGGCAAACGTACGTGTCCAAGGCGTCGGCGCTGCTGCGATCGCAAAAGTTCCTCGGCATCGGCGGCTTCTT CAGCCGGCTGCGAGATAAGGGAACGCTCGTCAAGGACACATGGAGCACCATCAGCAGCGCCATCGACGCGCAGCA GACGATGGAGGACATGGCCAAGATGGAGGAGAAGGGCGGCGAGGACTGGACGGACGAGCGGCGGGTCGAGTACGA GCGCCGCGTGACGGGCAAGATCTTGACGGCGGCCTGGCGGGGAAGCAAGTTTGAGATACAGAGCGTGCTGCGCGA GGTTTGCGACAGCGTGCTCAACGACAAGAAGGTCTCGCTGTCGAAGCGGTTAGAGCGCGCCCAGGCGCTGGTGCT CATCGGTGACGTCTTTGTCAAGGTGCGTCGATTGCTGTCCCTCACTCTCTCCGAGCCCGTCGCCATTGACACGTT TTGGACGGACAGGCAAAGCGCTCGCCCGAAGAAGAGGGCGACTATCTCGTCTTCGAGCAGCTCGTCGCCGACGCC GCGCTTAAGAAAGACAAGGACGACGAGAGGCGCAAAAAGGATAAGAAGGGACGGGACGGCACTCACCATCAAGGC CACCCACACGTCCACGATGGCCAAGGCGGCCCTCAGCCGGCCGAGGCGGCAACCTCCGACAGCGCTCACACCAGC AAGGCATAG |