Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|02361
Gene name
Location	scaffold_02:3459034..3460326
Strand	+
Gene length (bp)	1292
Transcript length (bp)	1230
Coding sequence length (bp)	1230
Protein length (aa)	410

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00561	Abhydrolase_1	alpha/beta hydrolase fold	7.7E-13	117	225
PF12697	Abhydrolase_6	Alpha/beta hydrolase family	8.6E-11	125	387
PF12146	Hydrolase_4	Serine aminopeptidase, S33	4.7E-09	139	384

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 70	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
Fungus	Fungus in pure culture	1.36	0.11	2.61
Alive	In ants, during behavior modification	1.01	0.00	2.03
Dead	In ants, recently dead	0.97	0.00	1.95

Differential expression

Label1	Label2	Q-value	Significant difference
Alive	Fungus	0.539820	no
Alive	Dead	0.933988	no
Dead	Fungus	0.474319	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|02361 MTMTTTTTTESSTERDMTTTNTNGVIQMATDDMSSPSRFSTVEETLKHAAFLGVVWDLEPHSSGKATVASSRGGP LKLAWEIHGSGPIKVVVSIHPLAPYYAQHPANASLLTKLIMGLAGVMATWQRQTLYLGHERGHRFSVLLLDNRGV GLSDRPFGRYSTSEMARDVMEVLDQVGWTDDRQLHVIGISLGGMISQELACLMPKRLASLSLISTAGHLRGSEGQ GSTSHFAQLVNGLGMLRPRSEAQTIMDTARRVFTPSWLSAPDTATLPTATTPRCRLPRHDAYPPRFTSNFQRYQA QELVKRRRPGFSRLGYLYQGVAAVWHYKTEEQLRVMADAVGRRRIMVVHGREDAMIRLEYGIGLVEAVEPAVVHF VDGAGHAPCIDREGWFNNMLEQNLEAWNALGAEE*
Coding	>Ophcf2\|02361 ATGACAATGACGACCACGACAACGACGGAAAGCTCAACCGAGCGAGACATGACGACGACCAACACCAACGGCGTC ATTCAGATGGCTACAGACGACATGTCCTCACCCTCCCGCTTCTCAACGGTGGAAGAGACGCTCAAGCACGCCGCC TTCCTGGGCGTCGTCTGGGATCTAGAGCCGCATTCATCTGGCAAGGCAACAGTAGCCTCCTCCCGGGGCGGACCA CTGAAACTGGCATGGGAGATTCACGGCTCGGGTCCGATCAAGGTGGTGGTGAGCATTCATCCCCTTGCGCCCTAC TACGCCCAACACCCAGCTAACGCGTCACTCCTCACCAAGCTCATCATGGGCCTCGCCGGCGTCATGGCGACTTGG CAGCGGCAAACGCTATATCTAGGCCACGAGCGCGGTCACCGCTTCTCCGTGCTCTTGCTGGATAATCGCGGCGTT GGCCTCAGCGATCGGCCGTTTGGACGCTACTCTACCAGCGAGATGGCGCGCGATGTCATGGAGGTGCTCGATCAA GTCGGCTGGACGGATGACAGACAGCTTCACGTCATTGGCATCTCGCTCGGGGGCATGATCTCACAGGAATTAGCC TGCCTGATGCCTAAAAGACTCGCCTCCCTCAGTCTGATTTCCACAGCCGGTCATCTACGAGGATCAGAAGGACAG GGCTCAACCTCACATTTCGCACAATTAGTCAACGGTCTCGGCATGCTACGGCCCAGATCCGAGGCTCAGACCATC ATGGACACAGCCCGTCGCGTCTTCACCCCATCCTGGCTCTCAGCACCAGACACAGCCACACTCCCCACGGCAACG ACGCCCAGATGCCGCCTCCCACGTCACGATGCGTACCCCCCACGCTTCACCTCCAACTTCCAGCGCTACCAGGCG CAGGAGCTCGTCAAGAGGCGACGTCCCGGCTTCTCGCGCCTGGGATACCTCTATCAGGGCGTCGCTGCTGTCTGG CACTACAAGACGGAGGAGCAGCTGCGGGTCATGGCCGATGCGGTGGGCCGTCGACGGATCATGGTCGTTCATGGT CGTGAGGATGCTATGATTAGGCTTGAGTATGGGATTGGGCTTGTGGAGGCGGTTGAGCCGGCTGTTGTGCACTTT GTTGATGGGGCGGGACATGCGCCTTGCATTGACCGGGAGGGTTGGTTTAATAATATGCTTGAGCAGAATCTGGAG GCGTGGAATGCCTTGGGGGCTGAGGAGTGA
Transcript	>Ophcf2\|02361 ATGACAATGACGACCACGACAACGACGGAAAGCTCAACCGAGCGAGACATGACGACGACCAACACCAACGGCGTC ATTCAGATGGCTACAGACGACATGTCCTCACCCTCCCGCTTCTCAACGGTGGAAGAGACGCTCAAGCACGCCGCC TTCCTGGGCGTCGTCTGGGATCTAGAGCCGCATTCATCTGGCAAGGCAACAGTAGCCTCCTCCCGGGGCGGACCA CTGAAACTGGCATGGGAGATTCACGGCTCGGGTCCGATCAAGGTGGTGGTGAGCATTCATCCCCTTGCGCCCTAC TACGCCCAACACCCAGCTAACGCGTCACTCCTCACCAAGCTCATCATGGGCCTCGCCGGCGTCATGGCGACTTGG CAGCGGCAAACGCTATATCTAGGCCACGAGCGCGGTCACCGCTTCTCCGTGCTCTTGCTGGATAATCGCGGCGTT GGCCTCAGCGATCGGCCGTTTGGACGCTACTCTACCAGCGAGATGGCGCGCGATGTCATGGAGGTGCTCGATCAA GTCGGCTGGACGGATGACAGACAGCTTCACGTCATTGGCATCTCGCTCGGGGGCATGATCTCACAGGAATTAGCC TGCCTGATGCCTAAAAGACTCGCCTCCCTCAGTCTGATTTCCACAGCCGGTCATCTACGAGGATCAGAAGGACAG GGCTCAACCTCACATTTCGCACAATTAGTCAACGGTCTCGGCATGCTACGGCCCAGATCCGAGGCTCAGACCATC ATGGACACAGCCCGTCGCGTCTTCACCCCATCCTGGCTCTCAGCACCAGACACAGCCACACTCCCCACGGCAACG ACGCCCAGATGCCGCCTCCCACGTCACGATGCGTACCCCCCACGCTTCACCTCCAACTTCCAGCGCTACCAGGCG CAGGAGCTCGTCAAGAGGCGACGTCCCGGCTTCTCGCGCCTGGGATACCTCTATCAGGGCGTCGCTGCTGTCTGG CACTACAAGACGGAGGAGCAGCTGCGGGTCATGGCCGATGCGGTGGGCCGTCGACGGATCATGGTCGTTCATGGT CGTGAGGATGCTATGATTAGGCTTGAGTATGGGATTGGGCTTGTGGAGGCGGTTGAGCCGGCTGTTGTGCACTTT GTTGATGGGGCGGGACATGCGCCTTGCATTGACCGGGAGGGTTGGTTTAATAATATGCTTGAGCAGAATCTGGAG GCGTGGAATGCCTTGGGGGCTGAGGAGTGA
Gene	>Ophcf2\|02361 ATGACAATGACGACCACGACAACGACGGAAAGCTCAACCGAGCGAGACATGACGACGACCAACACCAACGGCGTC ATTCAGATGGCTACAGACGACATGTAAGCGGTGGTTATACACTCCCTCACAGCAACCAACGACAGCTGCTGATGA TTGATTCCAGGTCCTCACCCTCCCGCTTCTCAACGGTGGAAGAGACGCTCAAGCACGCCGCCTTCCTGGGCGTCG TCTGGGATCTAGAGCCGCATTCATCTGGCAAGGCAACAGTAGCCTCCTCCCGGGGCGGACCACTGAAACTGGCAT GGGAGATTCACGGCTCGGGTCCGATCAAGGTGGTGGTGAGCATTCATCCCCTTGCGCCCTACTACGCCCAACACC CAGCTAACGCGTCACTCCTCACCAAGCTCATCATGGGCCTCGCCGGCGTCATGGCGACTTGGCAGCGGCAAACGC TATATCTAGGCCACGAGCGCGGTCACCGCTTCTCCGTGCTCTTGCTGGATAATCGCGGCGTTGGCCTCAGCGATC GGCCGTTTGGACGCTACTCTACCAGCGAGATGGCGCGCGATGTCATGGAGGTGCTCGATCAAGTCGGCTGGACGG ATGACAGACAGCTTCACGTCATTGGCATCTCGCTCGGGGGCATGATCTCACAGGAATTAGCCTGCCTGATGCCTA AAAGACTCGCCTCCCTCAGTCTGATTTCCACAGCCGGTCATCTACGAGGATCAGAAGGACAGGGCTCAACCTCAC ATTTCGCACAATTAGTCAACGGTCTCGGCATGCTACGGCCCAGATCCGAGGCTCAGACCATCATGGACACAGCCC GTCGCGTCTTCACCCCATCCTGGCTCTCAGCACCAGACACAGCCACACTCCCCACGGCAACGACGCCCAGATGCC GCCTCCCACGTCACGATGCGTACCCCCCACGCTTCACCTCCAACTTCCAGCGCTACCAGGCGCAGGAGCTCGTCA AGAGGCGACGTCCCGGCTTCTCGCGCCTGGGATACCTCTATCAGGGCGTCGCTGCTGTCTGGCACTACAAGACGG AGGAGCAGCTGCGGGTCATGGCCGATGCGGTGGGCCGTCGACGGATCATGGTCGTTCATGGTCGTGAGGATGCTA TGATTAGGCTTGAGTATGGGATTGGGCTTGTGGAGGCGGTTGAGCCGGCTGTTGTGCACTTTGTTGATGGGGCGG GACATGCGCCTTGCATTGACCGGGAGGGTTGGTTTAATAATATGCTTGAGCAGAATCTGGAGGCGTGGAATGCCT TGGGGGCTGAGGAGTGA

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