Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02360
Gene name
Locationscaffold_02:3457527..3458599
Strand+
Gene length (bp)1072
Transcript length (bp)852
Coding sequence length (bp)852
Protein length (aa) 284

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05817 Ribophorin_II Oligosaccharyltransferase subunit Ribophorin II 2.0E-26 28 274

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0006487 protein N-linked glycosylation Yes
GO:0008250 oligosaccharyltransferase complex Yes
GO:0019538 protein metabolic process No
GO:0110165 cellular anatomical entity No
GO:1990234 transferase complex No
GO:0036211 protein modification process No
GO:1901564 organonitrogen compound metabolic process No
GO:0008152 metabolic process No
GO:0031224 intrinsic component of membrane No
GO:0006486 protein glycosylation No
GO:0043170 macromolecule metabolic process No
GO:0032991 protein-containing complex No
GO:0140534 endoplasmic reticulum protein-containing complex No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0005575 cellular_component No
GO:0006807 nitrogen compound metabolic process No
GO:0043413 macromolecule glycosylation No
GO:0043412 macromolecule modification No
GO:0070085 glycosylation No
GO:0098796 membrane protein complex No
GO:0008150 biological_process No
GO:1902494 catalytic complex No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 185 207 22
2 222 244 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02360
MRLLTASAACLFVGAVSGASSWSFSDATVTASSKSAKSSSTKFSASKKIQEAVSLGPRDSIKLSLTTVDDEGNAK
RPHQALLVVGESSGLEVPFALTVKKSGKGTLQFSQKDLPPQLLLAQTPLQARLILASSDSAKGLVTPTFDIALKL
DSSTADPSHDKPLRYVRQAEISHTFRGDPRSPPRIVSLAFALALIASVPTLVVAWLFFEANLGHAATAFSRAPVS
HAVFFGSVIGMECVFYLYHGGWNLFRTLPVVCLVGVSAFLSGTKALGEVQRRRLAGER*
Coding >Ophcf2|02360
ATGCGTCTCCTCACAGCTTCGGCGGCCTGTCTATTCGTGGGCGCTGTCAGTGGAGCCTCCTCTTGGAGCTTCTCT
GATGCGACAGTGACAGCCTCGTCCAAGTCGGCCAAGAGCAGCAGCACAAAATTTTCAGCATCTAAAAAGATTCAG
GAGGCGGTGTCATTGGGCCCGAGAGACTCGATCAAGCTCTCCCTGACCACGGTGGACGACGAAGGCAACGCGAAG
CGGCCGCACCAGGCCCTTCTCGTGGTCGGGGAGTCGTCCGGCCTCGAGGTCCCTTTTGCCCTTACGGTCAAGAAA
TCTGGCAAGGGAACTCTTCAGTTTAGCCAAAAGGACCTCCCTCCACAGCTGCTCCTCGCACAAACGCCGTTGCAG
GCGAGGCTCATCCTGGCTTCGTCCGATTCGGCAAAGGGATTGGTGACGCCCACGTTCGATATCGCGCTGAAGCTG
GATTCTTCCACGGCGGACCCCAGCCACGATAAGCCACTTCGATACGTTAGGCAGGCCGAGATCAGCCACACATTT
CGTGGGGATCCCAGGAGCCCACCGCGAATCGTGTCACTGGCCTTTGCCTTGGCTCTAATTGCCAGTGTGCCAACT
CTTGTGGTCGCGTGGCTGTTTTTCGAGGCCAACCTGGGGCACGCAGCCACAGCCTTTTCCCGCGCTCCCGTGTCT
CATGCCGTCTTTTTCGGATCTGTCATTGGGATGGAATGCGTCTTCTACCTCTATCACGGTGGTTGGAACCTGTTC
CGCACGCTCCCTGTCGTTTGCCTCGTCGGTGTTTCCGCCTTCCTGAGCGGGACAAAGGCGCTCGGCGAGGTGCAG
CGGCGACGACTGGCGGGCGAGAGGTAA
Transcript >Ophcf2|02360
ATGCGTCTCCTCACAGCTTCGGCGGCCTGTCTATTCGTGGGCGCTGTCAGTGGAGCCTCCTCTTGGAGCTTCTCT
GATGCGACAGTGACAGCCTCGTCCAAGTCGGCCAAGAGCAGCAGCACAAAATTTTCAGCATCTAAAAAGATTCAG
GAGGCGGTGTCATTGGGCCCGAGAGACTCGATCAAGCTCTCCCTGACCACGGTGGACGACGAAGGCAACGCGAAG
CGGCCGCACCAGGCCCTTCTCGTGGTCGGGGAGTCGTCCGGCCTCGAGGTCCCTTTTGCCCTTACGGTCAAGAAA
TCTGGCAAGGGAACTCTTCAGTTTAGCCAAAAGGACCTCCCTCCACAGCTGCTCCTCGCACAAACGCCGTTGCAG
GCGAGGCTCATCCTGGCTTCGTCCGATTCGGCAAAGGGATTGGTGACGCCCACGTTCGATATCGCGCTGAAGCTG
GATTCTTCCACGGCGGACCCCAGCCACGATAAGCCACTTCGATACGTTAGGCAGGCCGAGATCAGCCACACATTT
CGTGGGGATCCCAGGAGCCCACCGCGAATCGTGTCACTGGCCTTTGCCTTGGCTCTAATTGCCAGTGTGCCAACT
CTTGTGGTCGCGTGGCTGTTTTTCGAGGCCAACCTGGGGCACGCAGCCACAGCCTTTTCCCGCGCTCCCGTGTCT
CATGCCGTCTTTTTCGGATCTGTCATTGGGATGGAATGCGTCTTCTACCTCTATCACGGTGGTTGGAACCTGTTC
CGCACGCTCCCTGTCGTTTGCCTCGTCGGTGTTTCCGCCTTCCTGAGCGGGACAAAGGCGCTCGGCGAGGTGCAG
CGGCGACGACTGGCGGGCGAGAGGTAA
Gene >Ophcf2|02360
ATGCGTCTCCTCACAGCTTCGGCGGCCTGTCTATTCGTGGGCGCTGTCAGTGGAGCCTCCTCTTGGAGCTTCTCT
GATGCGACAGTGACAGCCTCGTCCAAGTCGGCCAAGAGCAGCAGCACAAAGTGAGCCTTCCCCGTCGCTGGCTGG
ACCGTGGCTGACCCAGGGCTTGACTGCAGATTTTCAGCATCTAAAAAGATTCAGGAGGCGGTGTCATTGGGCCCG
AGAGACTCGATCAAGCTCTCCCTGACCACGGTGGACGACGAAGGCAACGCGAAGCGGCCGCACCAGGCCCTTCTC
GTGGTCGGGGAGTCGTCCGGCCTCGAGGTCCCTTTTGCCCTTACGGTCAAGAAATCTGGCAAGGGAACTCTTCAG
TTTGTATCGTCTCCCCGTTCTTCTTGCCCTGCCCTGATTGCGGCTGCGAAGACACTAGCTAATGTGGATGGACGC
GCAGAGCCAAAAGGACCTCCCTCCACAGCTGCTCCTCGCACAAACGCCGTTGCAGGCGAGGCTCATCCTGGCTTC
GTCCGATTCGGCAAAGGGATTGGTGACGCCCACGTTCGATATCGCGCTGAAGCTGGATTCTTCCACGGCGGACCC
CAGCCACGATAAGCCACTTCGATACGTTAGGCAGGCCGAGATCAGCCACACATTTCGTGGGGATCCCAGGAGCCC
ACCGCGAATCGTGTCACTGGCCTTTGCCTTGGCTCTAATTGCCAGTGTGCCAACTCTTGTGGTCGCGGTATGTCC
TCCGTTTAGCGGCGACTCCACGTGCCCGTTTGATCTTGAAAGCTCCAGTTTCAACTAAAACTGTTTTGGGGGGCG
GGGGTAGTGGCTGTTTTTCGAGGCCAACCTGGGGCACGCAGCCACAGCCTTTTCCCGCGCTCCCGTGTCTCATGC
CGTCTTTTTCGGATCTGTCATTGGGATGGAATGCGTCTTCTACCTCTATCACGGTGGTTGGAACCTGTTCCGCAC
GCTCCCTGTCGTTTGCCTCGTCGGTGTTTCCGCCTTCCTGAGCGGGACAAAGGCGCTCGGCGAGGTGCAGCGGCG
ACGACTGGCGGGCGAGAGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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