Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02343
Gene name
Locationscaffold_02:3409195..3411288
Strand-
Gene length (bp)2093
Transcript length (bp)1494
Coding sequence length (bp)1494
Protein length (aa) 498

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.45

Transmembrane Domains

Domain # Start End Length
1 162 184 22
2 208 227 19
3 234 256 22
4 288 310 22
5 336 358 22
6 368 387 19
7 394 412 18
8 432 454 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02343
MPALFLQVPTATPSSVNYCVIARATPPPGPWLNVSFALFSVQHHAPVSRSVLAPPSFSSLDLLFIHHRHSHQSSR
LQSLVQPALAQSPVLATRTSSLDYNSKYSREFGQAYPQPAYSQPAYAENANLNAGFDQGYAYRQGLASSNPARSV
YRDRMSFLKSKWPAAFMAVASLQAIVCLAFESFVFASFQSSLGRYDNKPDVQSQYKTIPTFLTLIIFGFLYELVV
VWDALRMKNTIQVIGVCIANLALLVYTAIQVDQIQMAISTLGIAALKPGITPDQVWSQLRPFLVAIPAIIALATA
AMVFIAWKLYQEFAWDILKNIGADYRMKKRFLHYQIYIALLKFDFFFFLGFIIQFVVIVAQKTDPEFALTIATIP
VTICILLAAAYFTRRENKLGMMAVIILYLGGLIYFIFKLVRIYQPAYRLFYLPVRKSLTAFAVITILLILLTIAN
AVICMGNFDKGLKAHLLTPRRMDEKPDAHSISLHDVKPQIPSRMTID*
Coding >Ophcf2|02343
ATGCCCGCCCTCTTCCTCCAAGTTCCCACTGCTACCCCTTCCAGCGTCAACTACTGTGTCATCGCGCGCGCGACG
CCACCGCCGGGGCCTTGGTTGAACGTTTCGTTCGCACTGTTCTCGGTACAACATCACGCGCCCGTTTCCCGCTCC
GTTCTTGCGCCACCCTCATTCTCCTCCTTGGACCTCCTGTTTATTCATCATCGTCACTCTCATCAATCATCTCGT
CTTCAGTCTCTCGTTCAGCCGGCACTCGCCCAGTCGCCCGTCCTGGCTACCAGGACGTCGTCTCTCGATTACAAC
TCAAAGTACTCGCGCGAATTCGGACAGGCCTACCCGCAGCCCGCATACTCGCAGCCCGCCTACGCGGAGAATGCC
AATCTGAACGCTGGCTTCGATCAGGGCTACGCCTATCGCCAGGGCCTGGCCTCTTCCAATCCGGCCAGGAGTGTC
TACCGCGACAGGATGAGCTTCCTCAAGTCGAAATGGCCCGCCGCCTTCATGGCCGTCGCCAGTCTCCAGGCCATC
GTTTGCCTGGCATTTGAGTCATTTGTCTTTGCTTCCTTCCAGTCGAGCCTCGGCCGTTATGACAACAAGCCCGAT
GTTCAATCCCAGTACAAGACGATTCCCACCTTTTTGACCCTCATCATCTTTGGCTTCCTGTACGAGCTGGTCGTC
GTCTGGGATGCGCTGCGAATGAAAAACACCATCCAGGTCATTGGCGTCTGCATCGCCAACCTGGCCCTGCTCGTC
TACACCGCCATCCAGGTCGACCAGATCCAGATGGCCATCAGCACCCTCGGTATCGCCGCCTTGAAGCCCGGCATC
ACCCCGGACCAGGTCTGGTCTCAGCTGAGGCCCTTCCTCGTCGCCATCCCTGCCATCATCGCCCTCGCCACCGCC
GCCATGGTCTTCATCGCCTGGAAGCTCTACCAGGAGTTTGCCTGGGACATTCTCAAGAACATTGGCGCCGACTAT
CGCATGAAGAAGCGCTTCCTCCATTATCAGATCTACATTGCCCTCCTCAAGTTCGACTTCTTCTTCTTCCTCGGC
TTCATCATCCAATTCGTCGTCATCGTCGCCCAAAAGACCGATCCCGAGTTCGCCCTGACCATCGCCACCATCCCC
GTCACCATCTGCATCCTCCTCGCCGCCGCCTACTTCACTCGCCGCGAGAACAAGCTCGGCATGATGGCCGTCATC
ATCCTCTACCTCGGCGGCCTCATCTACTTCATCTTCAAGCTCGTCCGCATCTACCAGCCCGCCTACAGGCTCTTC
TACCTGCCCGTCCGCAAGTCCCTAACCGCCTTTGCCGTCATCACCATCCTATTGATCCTCCTCACCATTGCAAAC
GCCGTCATCTGCATGGGCAACTTTGACAAGGGGCTCAAGGCTCACCTGCTGACCCCCCGCCGGATGGACGAGAAG
CCGGATGCACACTCCATCAGTCTGCACGACGTCAAGCCGCAGATTCCCAGCCGGATGACCATCGACTGA
Transcript >Ophcf2|02343
ATGCCCGCCCTCTTCCTCCAAGTTCCCACTGCTACCCCTTCCAGCGTCAACTACTGTGTCATCGCGCGCGCGACG
CCACCGCCGGGGCCTTGGTTGAACGTTTCGTTCGCACTGTTCTCGGTACAACATCACGCGCCCGTTTCCCGCTCC
GTTCTTGCGCCACCCTCATTCTCCTCCTTGGACCTCCTGTTTATTCATCATCGTCACTCTCATCAATCATCTCGT
CTTCAGTCTCTCGTTCAGCCGGCACTCGCCCAGTCGCCCGTCCTGGCTACCAGGACGTCGTCTCTCGATTACAAC
TCAAAGTACTCGCGCGAATTCGGACAGGCCTACCCGCAGCCCGCATACTCGCAGCCCGCCTACGCGGAGAATGCC
AATCTGAACGCTGGCTTCGATCAGGGCTACGCCTATCGCCAGGGCCTGGCCTCTTCCAATCCGGCCAGGAGTGTC
TACCGCGACAGGATGAGCTTCCTCAAGTCGAAATGGCCCGCCGCCTTCATGGCCGTCGCCAGTCTCCAGGCCATC
GTTTGCCTGGCATTTGAGTCATTTGTCTTTGCTTCCTTCCAGTCGAGCCTCGGCCGTTATGACAACAAGCCCGAT
GTTCAATCCCAGTACAAGACGATTCCCACCTTTTTGACCCTCATCATCTTTGGCTTCCTGTACGAGCTGGTCGTC
GTCTGGGATGCGCTGCGAATGAAAAACACCATCCAGGTCATTGGCGTCTGCATCGCCAACCTGGCCCTGCTCGTC
TACACCGCCATCCAGGTCGACCAGATCCAGATGGCCATCAGCACCCTCGGTATCGCCGCCTTGAAGCCCGGCATC
ACCCCGGACCAGGTCTGGTCTCAGCTGAGGCCCTTCCTCGTCGCCATCCCTGCCATCATCGCCCTCGCCACCGCC
GCCATGGTCTTCATCGCCTGGAAGCTCTACCAGGAGTTTGCCTGGGACATTCTCAAGAACATTGGCGCCGACTAT
CGCATGAAGAAGCGCTTCCTCCATTATCAGATCTACATTGCCCTCCTCAAGTTCGACTTCTTCTTCTTCCTCGGC
TTCATCATCCAATTCGTCGTCATCGTCGCCCAAAAGACCGATCCCGAGTTCGCCCTGACCATCGCCACCATCCCC
GTCACCATCTGCATCCTCCTCGCCGCCGCCTACTTCACTCGCCGCGAGAACAAGCTCGGCATGATGGCCGTCATC
ATCCTCTACCTCGGCGGCCTCATCTACTTCATCTTCAAGCTCGTCCGCATCTACCAGCCCGCCTACAGGCTCTTC
TACCTGCCCGTCCGCAAGTCCCTAACCGCCTTTGCCGTCATCACCATCCTATTGATCCTCCTCACCATTGCAAAC
GCCGTCATCTGCATGGGCAACTTTGACAAGGGGCTCAAGGCTCACCTGCTGACCCCCCGCCGGATGGACGAGAAG
CCGGATGCACACTCCATCAGTCTGCACGACGTCAAGCCGCAGATTCCCAGCCGGATGACCATCGACTGA
Gene >Ophcf2|02343
ATGCCCGCCCTCTTCCTCCAAGTTCCCACTGCTGTAACCTCATTTCGCCCAGGGGTTCCCCTACCATCCATTCAT
CCCCCGGCTCCCCCTTGGCCGTCGTCGTCGGTCTGATAGGCCGGTCCTTGCTCCACGTCCAGGTTACAGTGCGCG
TAGACCCCTTCCAGCGTCAACTACTGTGTCATCGCGCGCGCGACGCCACCGCCGGGGCCTTGGTTGAACGTTTCG
TTCGCACTGTTCTCGGTACAACATCACGCGCCCGTTTCCCGCTCCGTTCTTGCGCCACCCTCATTCTCCTCCTTG
GACCTCCTGTTTATTCATCATCGTCACTCTCATCAATCATCTCGTCTTCAGTCTCTCGTTCAGCCGGCACGTCTG
TCATCTATCGTTTTTTTTTTTTTTTTTTTCACTCGGGTCCGCTCCTCTGAGAATCTCCTCTGCTCCCTACCAGCT
CTCGACTTCGCCACAACATCAAGATAAAAATAACCCACCGAGAGAGGGAAAAAAAAAAAAGCAAAGAAACAAGGC
CCAGAAAAGAGCGCATTTCACCCCTTCACCCTTTCATTCTATCCCGCTCTCGCCCGCCATCGACGACGACGACGA
CGACGACGACGACGACTACCGCAACGATTCCCAGACGTCGAATCTCCGCTGACTCCCGGTCGGAGTCGCCCAGTC
GCCCGTCCTGGCTACCAGGTCAGACAGATTCCGCACCCCTTAGGCTCTCAAGGCCCTCTTCCCGCTCACCTTCTC
AGCAGGACGTCGTCTCTCGATTACAACTCAAAGTACTCGCGCGAATTCGGACAGGCCTACCCGCAGCCCGCATAC
TCGCAGCCCGCCTACGCGGAGAATGCCAATCTGAACGCTGGCTTCGATCAGGGCTACGCCTATCGCCAGGGCCTG
GCCTCTTCCAATCCGGCCAGGAGTGTCTACCGCGACAGGATGAGCTTCCTCAAGTCGAAATGGCCCGCCGCCTTC
ATGGCCGTCGCCAGTCTCCAGGCCATCGTTTGCCTGGCATTTGAGTCGTACGCCACCCGTCGTCACCCCCTTGGA
CGCCCGCTTACCAGCTTGCAACAGATTTGTCTTTGCTTCCTTCCAGTCGAGCCTCGGCCGTTATGACAACAAGCC
CGATGTTCAATCCCAGTACAAGACGATTCCCACCTTTTTGACCCTCATCATCTTTGGCTTCCTGTACGAGCTGGT
CGTCGTCTGGGATGCGCTGCGAATGAAAAACACCATCCAGGTCATTGGCGTCTGCATCGCCAACCTGGCCCTGCT
CGTCTACACCGCCATCCAGGTCGACCAGATCCAGATGGCCATCAGCACCCTCGGTATCGCCGCCTTGAAGCCCGG
CATCACCCCGGACCAGGTCTGGTCTCAGCTGAGGCCCTTCCTCGTCGCCATCCCTGCCATCATCGCCCTCGCCAC
CGCCGCCATGGTCTTCATCGCCTGGAAGCTCTACCAGGAGTTTGCCTGGGACATTCTCAAGAACATTGGCGCCGA
CTATCGCATGAAGAAGCGCTTCCTCCATTATCAGGTTCGCCTCCCATACCCGTTTCGCCGTCACGTCACCGCCAA
CGCAAAAAAGCTCACACCCCTCTTCTCAGATCTACATTGCCCTCCTCAAGTTCGACTTCTTCTTCTTCCTCGGCT
TCATCATCCAATTCGTCGTCATCGTCGCCCAAAAGACCGATCCCGAGTTCGCCCTGACCATCGCCACCATCCCCG
TCACCATCTGCATCCTCCTCGCCGCCGCCTACTTCACTCGCCGCGAGAACAAGCTCGGCATGATGGCCGTCATCA
TCCTCTACCTCGGCGGCCTCATCTACTTCATCTTCAAGCTCGTCCGCATCTACCAGCCCGCCTACAGGCTCTTCT
ACCTGCCCGTCCGCAAGTCCCTAACCGCCTTTGCCGTCATCACCATCCTATTGATCCTCCTCACCATTGCAAACG
CCGTCATCTGCATGGGCAACTTTGACAAGGGGCTCAAGGCTCACCTGCTGACCCCCCGCCGGATGGACGAGAAGC
CGGATGCACACTCCATCAGTCTGCACGACGTCAAGCCGCAGATTCCCAGCCGGATGACCATCGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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