Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02333
Gene name
Locationscaffold_02:3366290..3368139
Strand+
Gene length (bp)1849
Transcript length (bp)1788
Coding sequence length (bp)1788
Protein length (aa) 596

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

Domain # Start End Length
1 153 175 22
2 190 212 22
3 225 247 22
4 326 348 22
5 368 390 22
6 400 422 22
7 482 504 22
8 524 546 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02333
MSFFQFTQGTEAHSRPSDSSPLLGRYRAVPPRRDRRRQVSLGGRGSVHVGYGALMAAAAADDDDDDDDDEDGRGQ
RAERTLLQAWLLDLWVVPRQSAVKRVVDRWWSRYGLLVVLPTALVVGWCAVPLPQYPLDTKPEEPGKTPGHGAAR
VRLNFWFFLLVYYGLYSLTALAWITKVFNLYSLNWWPRSLGFPLTLSLVGALSVAVPVPVYWSARTRFLTEHNTA
WIAWTFVVMALPVAMALAILMTNARHVGGRHELSETQRIFTSSWWRAEPNRGTVPSSSDEAMPAAVPTMTSMSTR
AAAAATATTTTATATATETASAWHPASFVRFLWLCVALSIGLLAYVLGEAYAELYLGTLPHNSLETVVYVYGWVA
TVHLLDALTGWTLGIREGERVGSYPLSWVFKLYFTLTYQTYVRALYARLRSPSQFVVLQLLSSTTLVVLTPLSMT
RRYHGLLVATGLNGQSFGSYQKLQARNVFIRFLAENASMATFLASIAVLHYGANRNVYPYFALDDEAEPYDLALT
LWASSVTWACEMVASLAVRALIRLCFAVDVGVEGRQDLAVWPELLPTCVTVTLHVLQNMMFSIIRLQFYD*
Coding >Ophcf2|02333
ATGTCCTTCTTCCAGTTCACGCAGGGCACCGAGGCGCACTCGCGACCCAGCGACTCATCACCGCTGCTGGGCCGG
TACCGTGCCGTCCCGCCACGACGCGACCGGCGGAGGCAGGTCTCGCTGGGCGGGCGAGGGAGCGTCCACGTCGGA
TACGGGGCTCTGATGGCGGCGGCGGCGGCCGACGACGACGACGACGACGACGACGACGAGGATGGGCGAGGGCAG
CGGGCGGAGCGGACTCTGTTGCAGGCCTGGCTTCTGGATCTGTGGGTGGTCCCGAGGCAGTCTGCGGTGAAGCGG
GTGGTGGACAGGTGGTGGAGTCGGTACGGGCTGCTGGTGGTGCTGCCGACGGCGCTGGTGGTGGGTTGGTGCGCG
GTGCCGCTTCCGCAGTATCCGCTGGACACGAAACCGGAGGAGCCGGGCAAGACGCCGGGCCACGGGGCGGCACGA
GTGCGGCTCAACTTCTGGTTCTTCCTGCTGGTGTACTACGGGCTGTACAGCCTGACGGCACTGGCGTGGATCACA
AAGGTGTTTAACCTGTACAGCCTCAACTGGTGGCCGCGGTCGTTGGGATTCCCGCTCACGCTGTCGCTGGTGGGC
GCGCTGTCGGTCGCGGTGCCGGTGCCGGTATATTGGAGTGCGCGGACGAGGTTCCTGACGGAGCATAACACTGCG
TGGATTGCGTGGACGTTTGTGGTCATGGCCTTGCCGGTCGCCATGGCGCTGGCCATCCTCATGACCAATGCGCGG
CATGTCGGGGGTCGTCATGAGTTGTCGGAGACGCAGCGCATCTTTACGTCTTCGTGGTGGAGGGCCGAGCCGAAT
AGGGGGACCGTCCCGTCGTCGTCGGATGAGGCGATGCCGGCAGCCGTACCGACGATGACATCGATGTCGACAAGA
GCAGCAGCAGCAGCAACAGCAACGACAACAACAGCGACAGCAACAGCAACAGAGACAGCATCGGCCTGGCATCCC
GCCAGCTTCGTCCGCTTCCTCTGGCTCTGCGTCGCTCTGTCGATAGGTCTACTGGCGTACGTCCTCGGCGAGGCC
TACGCAGAGCTCTACCTCGGCACCCTACCGCACAACAGCCTGGAGACGGTCGTCTACGTCTACGGCTGGGTGGCG
ACCGTGCATCTGCTCGACGCGCTGACGGGCTGGACGCTGGGTATTCGTGAGGGCGAACGGGTCGGAAGCTACCCT
CTCAGCTGGGTCTTCAAGCTCTACTTTACACTGACGTATCAGACGTACGTGCGCGCTCTATACGCCCGTCTGCGG
TCGCCGTCGCAGTTTGTTGTCCTGCAGCTGCTCTCTTCCACGACGTTGGTGGTGCTCACGCCCCTTTCCATGACG
CGGCGTTATCATGGTCTGCTGGTGGCTACGGGCCTCAACGGGCAGAGCTTCGGCTCGTATCAGAAGCTGCAGGCT
CGCAACGTCTTCATCCGCTTCCTGGCGGAGAATGCGTCGATGGCGACCTTCTTAGCCAGCATCGCCGTCTTGCAC
TACGGCGCCAACCGCAATGTGTATCCTTACTTTGCGCTGGACGACGAGGCAGAGCCGTACGATCTGGCCTTGACG
CTATGGGCATCGTCTGTTACCTGGGCTTGTGAAATGGTGGCCAGCCTTGCCGTTCGCGCCCTGATACGACTATGT
TTCGCCGTGGATGTCGGGGTCGAGGGGAGGCAGGACCTTGCGGTATGGCCCGAGTTGCTGCCCACGTGCGTGACA
GTAACGCTGCACGTGTTGCAGAACATGATGTTTTCCATCATCCGGCTGCAGTTTTACGACTAA
Transcript >Ophcf2|02333
ATGTCCTTCTTCCAGTTCACGCAGGGCACCGAGGCGCACTCGCGACCCAGCGACTCATCACCGCTGCTGGGCCGG
TACCGTGCCGTCCCGCCACGACGCGACCGGCGGAGGCAGGTCTCGCTGGGCGGGCGAGGGAGCGTCCACGTCGGA
TACGGGGCTCTGATGGCGGCGGCGGCGGCCGACGACGACGACGACGACGACGACGACGAGGATGGGCGAGGGCAG
CGGGCGGAGCGGACTCTGTTGCAGGCCTGGCTTCTGGATCTGTGGGTGGTCCCGAGGCAGTCTGCGGTGAAGCGG
GTGGTGGACAGGTGGTGGAGTCGGTACGGGCTGCTGGTGGTGCTGCCGACGGCGCTGGTGGTGGGTTGGTGCGCG
GTGCCGCTTCCGCAGTATCCGCTGGACACGAAACCGGAGGAGCCGGGCAAGACGCCGGGCCACGGGGCGGCACGA
GTGCGGCTCAACTTCTGGTTCTTCCTGCTGGTGTACTACGGGCTGTACAGCCTGACGGCACTGGCGTGGATCACA
AAGGTGTTTAACCTGTACAGCCTCAACTGGTGGCCGCGGTCGTTGGGATTCCCGCTCACGCTGTCGCTGGTGGGC
GCGCTGTCGGTCGCGGTGCCGGTGCCGGTATATTGGAGTGCGCGGACGAGGTTCCTGACGGAGCATAACACTGCG
TGGATTGCGTGGACGTTTGTGGTCATGGCCTTGCCGGTCGCCATGGCGCTGGCCATCCTCATGACCAATGCGCGG
CATGTCGGGGGTCGTCATGAGTTGTCGGAGACGCAGCGCATCTTTACGTCTTCGTGGTGGAGGGCCGAGCCGAAT
AGGGGGACCGTCCCGTCGTCGTCGGATGAGGCGATGCCGGCAGCCGTACCGACGATGACATCGATGTCGACAAGA
GCAGCAGCAGCAGCAACAGCAACGACAACAACAGCGACAGCAACAGCAACAGAGACAGCATCGGCCTGGCATCCC
GCCAGCTTCGTCCGCTTCCTCTGGCTCTGCGTCGCTCTGTCGATAGGTCTACTGGCGTACGTCCTCGGCGAGGCC
TACGCAGAGCTCTACCTCGGCACCCTACCGCACAACAGCCTGGAGACGGTCGTCTACGTCTACGGCTGGGTGGCG
ACCGTGCATCTGCTCGACGCGCTGACGGGCTGGACGCTGGGTATTCGTGAGGGCGAACGGGTCGGAAGCTACCCT
CTCAGCTGGGTCTTCAAGCTCTACTTTACACTGACGTATCAGACGTACGTGCGCGCTCTATACGCCCGTCTGCGG
TCGCCGTCGCAGTTTGTTGTCCTGCAGCTGCTCTCTTCCACGACGTTGGTGGTGCTCACGCCCCTTTCCATGACG
CGGCGTTATCATGGTCTGCTGGTGGCTACGGGCCTCAACGGGCAGAGCTTCGGCTCGTATCAGAAGCTGCAGGCT
CGCAACGTCTTCATCCGCTTCCTGGCGGAGAATGCGTCGATGGCGACCTTCTTAGCCAGCATCGCCGTCTTGCAC
TACGGCGCCAACCGCAATGTGTATCCTTACTTTGCGCTGGACGACGAGGCAGAGCCGTACGATCTGGCCTTGACG
CTATGGGCATCGTCTGTTACCTGGGCTTGTGAAATGGTGGCCAGCCTTGCCGTTCGCGCCCTGATACGACTATGT
TTCGCCGTGGATGTCGGGGTCGAGGGGAGGCAGGACCTTGCGGTATGGCCCGAGTTGCTGCCCACGTGCGTGACA
GTAACGCTGCACGTGTTGCAGAACATGATGTTTTCCATCATCCGGCTGCAGTTTTACGACTAA
Gene >Ophcf2|02333
ATGTCCTTCTTCCAGTTCACGCAGGGCACCGAGGCGCACTCGCGACCCAGCGACTCATCACCGCTGCTGGGCCGG
TACCGTGCCGTCCCGCCACGACGCGACCGGCGGAGGCAGGTCTCGCTGGGCGGGCGAGGGAGCGTCCACGTCGGA
TACGGGGCTCTGATGGCGGCGGCGGCGGCCGACGACGACGACGACGACGACGACGACGAGGATGGGCGAGGGCAG
CGGGCGGAGCGGACTCTGTTGCAGGCCTGGCTTCTGGATCTGTGGGTGGTCCCGAGGCAGTCTGCGGTGAAGCGG
GTGGTGGACAGGTGGTGGAGTCGGTACGGGCTGCTGGTGGTGCTGCCGACGGCGCTGGTGAGGCTATCCAGGAAC
CCAAGGCGTTATCGATGGCCCGAACTGACGTGAGGTTGGCAAGGTGGTGGGTTGGTGCGCGGTGCCGCTTCCGCA
GTATCCGCTGGACACGAAACCGGAGGAGCCGGGCAAGACGCCGGGCCACGGGGCGGCACGAGTGCGGCTCAACTT
CTGGTTCTTCCTGCTGGTGTACTACGGGCTGTACAGCCTGACGGCACTGGCGTGGATCACAAAGGTGTTTAACCT
GTACAGCCTCAACTGGTGGCCGCGGTCGTTGGGATTCCCGCTCACGCTGTCGCTGGTGGGCGCGCTGTCGGTCGC
GGTGCCGGTGCCGGTATATTGGAGTGCGCGGACGAGGTTCCTGACGGAGCATAACACTGCGTGGATTGCGTGGAC
GTTTGTGGTCATGGCCTTGCCGGTCGCCATGGCGCTGGCCATCCTCATGACCAATGCGCGGCATGTCGGGGGTCG
TCATGAGTTGTCGGAGACGCAGCGCATCTTTACGTCTTCGTGGTGGAGGGCCGAGCCGAATAGGGGGACCGTCCC
GTCGTCGTCGGATGAGGCGATGCCGGCAGCCGTACCGACGATGACATCGATGTCGACAAGAGCAGCAGCAGCAGC
AACAGCAACGACAACAACAGCGACAGCAACAGCAACAGAGACAGCATCGGCCTGGCATCCCGCCAGCTTCGTCCG
CTTCCTCTGGCTCTGCGTCGCTCTGTCGATAGGTCTACTGGCGTACGTCCTCGGCGAGGCCTACGCAGAGCTCTA
CCTCGGCACCCTACCGCACAACAGCCTGGAGACGGTCGTCTACGTCTACGGCTGGGTGGCGACCGTGCATCTGCT
CGACGCGCTGACGGGCTGGACGCTGGGTATTCGTGAGGGCGAACGGGTCGGAAGCTACCCTCTCAGCTGGGTCTT
CAAGCTCTACTTTACACTGACGTATCAGACGTACGTGCGCGCTCTATACGCCCGTCTGCGGTCGCCGTCGCAGTT
TGTTGTCCTGCAGCTGCTCTCTTCCACGACGTTGGTGGTGCTCACGCCCCTTTCCATGACGCGGCGTTATCATGG
TCTGCTGGTGGCTACGGGCCTCAACGGGCAGAGCTTCGGCTCGTATCAGAAGCTGCAGGCTCGCAACGTCTTCAT
CCGCTTCCTGGCGGAGAATGCGTCGATGGCGACCTTCTTAGCCAGCATCGCCGTCTTGCACTACGGCGCCAACCG
CAATGTGTATCCTTACTTTGCGCTGGACGACGAGGCAGAGCCGTACGATCTGGCCTTGACGCTATGGGCATCGTC
TGTTACCTGGGCTTGTGAAATGGTGGCCAGCCTTGCCGTTCGCGCCCTGATACGACTATGTTTCGCCGTGGATGT
CGGGGTCGAGGGGAGGCAGGACCTTGCGGTATGGCCCGAGTTGCTGCCCACGTGCGTGACAGTAACGCTGCACGT
GTTGCAGAACATGATGTTTTCCATCATCCGGCTGCAGTTTTACGACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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