Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02329
Gene name
Locationscaffold_02:3358448..3360464
Strand+
Gene length (bp)2016
Transcript length (bp)1659
Coding sequence length (bp)1659
Protein length (aa) 553

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13639 zf-RING_2 Ring finger domain 1.1E-08 341 385

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 226 248 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02329
MSLIEIQNAVLLVSNPVWEGDKTVPSTIVRNISALSSQIGYEDRISTNLTTLATTNAPKLDGTFGGLLFVPQVTA
VPDCDAQQYDFLPRNVTRREQLPPSNLNVVAIAPWFSIECTRAYLSSAARGSARALIFYKPNNSSNKPQDVDSPV
WSLDDDDDWRKNYHFPIFAIPGLEGQKMVLQLSLYSGSIDQVPHGQEISQLYGPNPSDYVRVWTELTMQNTSNVP
AVWAFVLIVIAALLFVIAVVSLAMHFIQRRNRSSLQRRVQSGEVDLEAMGIKRLTVPASHVDRFPLFTYNAEAEL
ANAPRSPSAGPRSVRSLRSIRSKRSSIAGTTDTTATNFQPNCHICLAGFEHCKTVIRELPCGHIFHPACIDEFLT
QNSSLCPMCKHCMLPRGYSPKITNGMVRREQAVRRLREHVDFEDSSVDSGELKLREWGKRFFAKSDAPVDPGAAT
AGDASSASATPAPDAPPQPRPPPSRKAEARRTRPRALRLLPTHHEGVEPKEDETAVGRLSPSSFARERMRQIAES
NAPFDDDLDSRRPKWRRALSKAFPGFS*
Coding >Ophcf2|02329
ATGTCGCTCATCGAGATTCAAAATGCCGTACTCTTGGTCAGCAACCCGGTTTGGGAGGGCGACAAGACGGTCCCC
TCGACAATCGTCAGGAACATCTCGGCCCTGTCTAGCCAGATAGGCTACGAGGATCGCATATCTACCAACCTCACC
ACTCTCGCCACCACAAACGCCCCCAAGCTCGACGGCACCTTTGGCGGCCTCCTCTTCGTCCCCCAGGTCACCGCT
GTCCCCGACTGCGACGCCCAGCAGTACGACTTCCTCCCCCGCAATGTCACCCGCCGCGAGCAGCTTCCCCCCAGC
AACCTCAACGTCGTCGCCATCGCCCCCTGGTTCAGCATCGAGTGCACCCGCGCCTACCTCTCCTCCGCCGCCCGC
GGCTCCGCCCGCGCCCTCATCTTCTACAAACCCAACAACTCGTCCAACAAGCCCCAGGACGTTGACTCGCCAGTC
TGGAGCCTCGACGATGACGACGACTGGCGCAAGAACTACCACTTTCCCATCTTCGCCATCCCGGGCCTCGAGGGC
CAAAAGATGGTACTGCAGCTGAGCCTCTACTCGGGCTCCATCGACCAGGTGCCCCACGGCCAAGAGATTAGCCAG
CTCTACGGGCCCAACCCCAGCGACTACGTCCGCGTCTGGACCGAACTGACGATGCAGAATACGTCCAACGTCCCC
GCCGTTTGGGCCTTTGTCCTCATCGTCATCGCCGCCCTGCTCTTCGTCATCGCCGTCGTCTCCCTCGCCATGCAT
TTCATCCAGCGCCGGAATCGATCCTCCCTCCAGCGCCGCGTTCAGTCGGGCGAGGTCGACCTCGAGGCCATGGGC
ATCAAACGCCTGACCGTCCCGGCCTCACACGTCGACCGCTTCCCGCTCTTCACCTACAACGCCGAGGCCGAGCTG
GCCAACGCCCCGCGCTCCCCTTCGGCCGGCCCTCGGAGCGTCCGCAGTCTGCGCAGCATCCGCAGCAAGAGGTCG
AGCATCGCGGGCACCACCGACACCACCGCCACCAACTTCCAGCCCAACTGCCACATCTGCCTCGCCGGCTTCGAG
CACTGCAAGACGGTCATCCGCGAGCTGCCCTGCGGCCACATCTTCCACCCGGCCTGCATCGACGAGTTCCTGACG
CAAAACAGCTCACTGTGTCCCATGTGCAAGCACTGCATGCTGCCCCGCGGCTACAGCCCCAAGATTACAAACGGC
ATGGTCCGTCGTGAGCAGGCCGTGCGCCGACTGAGGGAGCACGTCGACTTTGAGGACTCGTCGGTCGACTCGGGC
GAGCTTAAGCTCAGGGAATGGGGTAAGCGCTTCTTCGCCAAATCGGACGCCCCCGTCGATCCGGGCGCCGCCACG
GCCGGAGACGCTTCCTCGGCTTCGGCCACGCCCGCCCCGGACGCGCCCCCTCAACCCCGGCCGCCCCCGTCCCGG
AAAGCGGAGGCGCGGAGGACGCGGCCCCGGGCCCTCAGGCTGCTACCGACGCACCACGAGGGGGTCGAGCCGAAG
GAGGACGAGACGGCCGTCGGGCGCCTGAGCCCTTCGTCGTTTGCCCGGGAGCGGATGCGGCAGATTGCCGAGAGC
AACGCGCCCTTTGACGACGACCTGGATAGTCGGCGTCCGAAGTGGCGACGAGCGCTATCCAAGGCCTTTCCCGGC
TTTTCGTAG
Transcript >Ophcf2|02329
ATGTCGCTCATCGAGATTCAAAATGCCGTACTCTTGGTCAGCAACCCGGTTTGGGAGGGCGACAAGACGGTCCCC
TCGACAATCGTCAGGAACATCTCGGCCCTGTCTAGCCAGATAGGCTACGAGGATCGCATATCTACCAACCTCACC
ACTCTCGCCACCACAAACGCCCCCAAGCTCGACGGCACCTTTGGCGGCCTCCTCTTCGTCCCCCAGGTCACCGCT
GTCCCCGACTGCGACGCCCAGCAGTACGACTTCCTCCCCCGCAATGTCACCCGCCGCGAGCAGCTTCCCCCCAGC
AACCTCAACGTCGTCGCCATCGCCCCCTGGTTCAGCATCGAGTGCACCCGCGCCTACCTCTCCTCCGCCGCCCGC
GGCTCCGCCCGCGCCCTCATCTTCTACAAACCCAACAACTCGTCCAACAAGCCCCAGGACGTTGACTCGCCAGTC
TGGAGCCTCGACGATGACGACGACTGGCGCAAGAACTACCACTTTCCCATCTTCGCCATCCCGGGCCTCGAGGGC
CAAAAGATGGTACTGCAGCTGAGCCTCTACTCGGGCTCCATCGACCAGGTGCCCCACGGCCAAGAGATTAGCCAG
CTCTACGGGCCCAACCCCAGCGACTACGTCCGCGTCTGGACCGAACTGACGATGCAGAATACGTCCAACGTCCCC
GCCGTTTGGGCCTTTGTCCTCATCGTCATCGCCGCCCTGCTCTTCGTCATCGCCGTCGTCTCCCTCGCCATGCAT
TTCATCCAGCGCCGGAATCGATCCTCCCTCCAGCGCCGCGTTCAGTCGGGCGAGGTCGACCTCGAGGCCATGGGC
ATCAAACGCCTGACCGTCCCGGCCTCACACGTCGACCGCTTCCCGCTCTTCACCTACAACGCCGAGGCCGAGCTG
GCCAACGCCCCGCGCTCCCCTTCGGCCGGCCCTCGGAGCGTCCGCAGTCTGCGCAGCATCCGCAGCAAGAGGTCG
AGCATCGCGGGCACCACCGACACCACCGCCACCAACTTCCAGCCCAACTGCCACATCTGCCTCGCCGGCTTCGAG
CACTGCAAGACGGTCATCCGCGAGCTGCCCTGCGGCCACATCTTCCACCCGGCCTGCATCGACGAGTTCCTGACG
CAAAACAGCTCACTGTGTCCCATGTGCAAGCACTGCATGCTGCCCCGCGGCTACAGCCCCAAGATTACAAACGGC
ATGGTCCGTCGTGAGCAGGCCGTGCGCCGACTGAGGGAGCACGTCGACTTTGAGGACTCGTCGGTCGACTCGGGC
GAGCTTAAGCTCAGGGAATGGGGTAAGCGCTTCTTCGCCAAATCGGACGCCCCCGTCGATCCGGGCGCCGCCACG
GCCGGAGACGCTTCCTCGGCTTCGGCCACGCCCGCCCCGGACGCGCCCCCTCAACCCCGGCCGCCCCCGTCCCGG
AAAGCGGAGGCGCGGAGGACGCGGCCCCGGGCCCTCAGGCTGCTACCGACGCACCACGAGGGGGTCGAGCCGAAG
GAGGACGAGACGGCCGTCGGGCGCCTGAGCCCTTCGTCGTTTGCCCGGGAGCGGATGCGGCAGATTGCCGAGAGC
AACGCGCCCTTTGACGACGACCTGGATAGTCGGCGTCCGAAGTGGCGACGAGCGCTATCCAAGGCCTTTCCCGGC
TTTTCGTAG
Gene >Ophcf2|02329
ATGTGTGAGTTGTCTGCTCTTCTTGGCTTTTCCCACCGCCAAGATGCATCGCCCAGCACTGACCGGCATGACCAG
CGCTCATCGAGATTCAAAATGCCGTGTGCGTCGAGAGCCCCCTTCGCCTCGCCCGAGCCCGCGCCGCCCGCTGAC
AACTCAGAAGACTCTTGGTCAGCAACCCGGTTTGGGAGGGCGACAAGACGGTCCCCTCGACAATCGTCAGGAACA
TCTCGGCCCTGTCTGTACGTCTAAAACACCACCACCACCACCTCTCCCTCCTCCTCCTCCTTCCTTCTCCTCCAG
AGATGCCCCCTCCTGACGACGGCCAAGAGCCAGATAGGCTACGAGGATCGCATATCTACCAACCTCACCACTCTC
GCCACCACAAACGCCCCCAAGCTCGACGGCACCTTTGGCGGCCTCCTCTTCGTCCCCCAGGTCACCGCTGTCCCC
GACTGCGACGCCCAGCAGTACGACTTCCTCCCCCGCAATGTCACCCGCCGCGAGCAGCTTCCCCCCAGCAACCTC
AACGTCGTCGCCATCGCCCCCTGGTTCAGCATCGAGTGCACCCGCGCCTACCTCTCCTCCGCCGCCCGCGGCTCC
GCCCGCGCCCTCATCTTCTACAAACCCAACAACTCGTCCAACAAGCCCCAGGACGTTGACTCGCCAGTCTGGAGC
CTCGACGATGACGACGACTGGCGCAAGAACTACCACTTTCCCATCTTCGCCATCCCGGGCCTCGAGGGCCAAAAG
ATGGTACTGCAGCTGAGCCTCTACTCGGGCTCCATCGACCAGGTGCCCCACGGCCAAGAGATTAGCCAGCTCTAC
GGGCCCAACCCCAGCGACTACGTCCGCGTCTGGACCGAACTGACGATGCAGAATACGTCCAACGTCCCCGCCGTT
TGGGCCTTTGTCCTCATCGTCATCGCCGCCCTGCTCTTCGTCATCGCCGTCGTCTCCCTCGCCATGCATTTCATC
CAGCGCCGGAATCGATCCTCCCTCCAGCGCCGCGTTCAGTCGGGCGAGGTCGACCTCGAGGCCATGGGCATCAAA
CGCCTGACCGTCCCGGCCTCACACGTCGACCGCTTCCCGCTCTTCACCTACAACGCCGAGGCCGAGCTGGCCAAC
GCCCCGCGCTCCCCGTCGACGCCCACCCCCGGAGGCCCTCGCGTAAGGGCCGGCGTCCCGAGACGCGCTCCGCCC
CGGCCGACGTCGCCAGTTCGGCCGGCCCTCGGAGCGTCCGCAGTCTGCGCAGCATCCGCAGCAAGAGGTCGAGCA
TCGCGGGCACCACCGACACCACCGCCACCAACTTCCAGCCCAACTGCCACATCTGCCTCGCCGGCTTCGAGCACT
GCAAGACGGTCATCCGCGAGCTGCCCTGCGGCCACATCTTCCACCCGGCCTGCATCGACGAGTTCCTGACGCAAA
ACAGCTCACTGTGTCCCATGTGCAAGCACTGCATGCTGCCCCGCGGCTACAGCCCCAAGATTACAAACGGCATGG
TCCGTCGTGAGCAGGCCGTGCGCCGACTGAGGGAGCACGTCGACTTTGAGGACTCGTCGGTCGACTCGGGCGAGC
TTAAGCTCAGGGAATGGGGTAAGCGCTTCTTCGCCAAATCGGACGCCCCCGTCGATCCGGGCGCCGCCACGGCCG
GAGACGCTTCCTCGGCTTCGGCCACGCCCGCCCCGGACGCGCCCCCTCAACCCCGGCCGCCCCCGTCCCGGAAAG
CGGAGGCGCGGAGGACGCGGCCCCGGGCCCTCAGGCTGCTACCGACGCACCACGAGGGGGTCGAGCCGAAGGAGG
ACGAGACGGCCGTCGGGCGCCTGAGCCCTTCGTCGTTTGCCCGGGAGCGGATGCGGCAGATTGCCGAGAGCAACG
CGCCCTTTGACGACGACCTGGATAGTCGGCGTCCGAAGTGTGAGTTTCCCCCTCCCTCTTTACCCGGTCGCTCCA
AGGTCCGCTGCTGACACCTTTCCAGGGCGACGAGCGCTATCCAAGGCCTTTCCCGGCTTTTCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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