Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02286
Gene name
Locationscaffold_02:3141866..3142562
Strand+
Gene length (bp)696
Transcript length (bp)696
Coding sequence length (bp)696
Protein length (aa) 232

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08510 PIG-P PIG-P 4.5E-54 85 223

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.45

Transmembrane Domains

Domain # Start End Length
1 88 107 19
2 127 149 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02286
MSVSSEEKDEYLSDGQSSDSSGHEWPARPLSQTYFAPPFYGRPPTPLPPSPSLTSLLRPSRPTTPDASDDDNMAP
VPRASPQVPTYEYYGFVLYLFSSLTFLLWLLWSYLPAPFLHGLGIYYYPNRWWALAIPAFITMTLCYIYVALASY
NTEILTLPMASVETIVDGAGKLAVIDAKGRLRGSSKRERKCDSNGRLRWREVWNEGTDAVMDIPLAGVCEVLYGD
GREEHA*
Coding >Ophcf2|02286
ATGTCGGTCTCATCGGAAGAGAAAGACGAGTACCTGTCGGACGGCCAATCTTCCGACTCGTCGGGCCACGAATGG
CCGGCACGTCCCCTGTCACAGACCTACTTTGCGCCGCCCTTCTATGGCCGACCACCGACGCCGCTGCCCCCTTCG
CCGTCATTGACGTCACTCCTTCGACCGTCGCGTCCGACGACGCCAGATGCCTCGGACGACGATAACATGGCGCCG
GTGCCCCGCGCGTCGCCCCAGGTGCCGACGTACGAGTACTACGGCTTCGTGCTGTACCTCTTCAGCAGCTTGACC
TTTCTTCTCTGGCTTCTATGGAGCTACCTGCCGGCGCCCTTCTTGCACGGCCTGGGCATCTACTACTACCCGAAC
CGATGGTGGGCGCTTGCCATCCCGGCCTTTATAACCATGACGCTGTGCTACATCTACGTGGCGCTGGCCTCTTAC
AACACGGAGATTCTGACGCTTCCTATGGCCAGCGTGGAGACAATCGTCGACGGTGCGGGAAAGCTGGCTGTCATC
GATGCCAAGGGCCGGCTTCGTGGCAGCAGCAAGAGAGAGAGGAAGTGTGACAGCAACGGACGCCTGAGATGGAGG
GAGGTCTGGAACGAGGGTACTGATGCCGTGATGGACATTCCTCTTGCGGGAGTGTGCGAGGTTCTTTACGGAGAC
GGGCGCGAAGAACACGCCTGA
Transcript >Ophcf2|02286
ATGTCGGTCTCATCGGAAGAGAAAGACGAGTACCTGTCGGACGGCCAATCTTCCGACTCGTCGGGCCACGAATGG
CCGGCACGTCCCCTGTCACAGACCTACTTTGCGCCGCCCTTCTATGGCCGACCACCGACGCCGCTGCCCCCTTCG
CCGTCATTGACGTCACTCCTTCGACCGTCGCGTCCGACGACGCCAGATGCCTCGGACGACGATAACATGGCGCCG
GTGCCCCGCGCGTCGCCCCAGGTGCCGACGTACGAGTACTACGGCTTCGTGCTGTACCTCTTCAGCAGCTTGACC
TTTCTTCTCTGGCTTCTATGGAGCTACCTGCCGGCGCCCTTCTTGCACGGCCTGGGCATCTACTACTACCCGAAC
CGATGGTGGGCGCTTGCCATCCCGGCCTTTATAACCATGACGCTGTGCTACATCTACGTGGCGCTGGCCTCTTAC
AACACGGAGATTCTGACGCTTCCTATGGCCAGCGTGGAGACAATCGTCGACGGTGCGGGAAAGCTGGCTGTCATC
GATGCCAAGGGCCGGCTTCGTGGCAGCAGCAAGAGAGAGAGGAAGTGTGACAGCAACGGACGCCTGAGATGGAGG
GAGGTCTGGAACGAGGGTACTGATGCCGTGATGGACATTCCTCTTGCGGGAGTGTGCGAGGTTCTTTACGGAGAC
GGGCGCGAAGAACACGCCTGA
Gene >Ophcf2|02286
ATGTCGGTCTCATCGGAAGAGAAAGACGAGTACCTGTCGGACGGCCAATCTTCCGACTCGTCGGGCCACGAATGG
CCGGCACGTCCCCTGTCACAGACCTACTTTGCGCCGCCCTTCTATGGCCGACCACCGACGCCGCTGCCCCCTTCG
CCGTCATTGACGTCACTCCTTCGACCGTCGCGTCCGACGACGCCAGATGCCTCGGACGACGATAACATGGCGCCG
GTGCCCCGCGCGTCGCCCCAGGTGCCGACGTACGAGTACTACGGCTTCGTGCTGTACCTCTTCAGCAGCTTGACC
TTTCTTCTCTGGCTTCTATGGAGCTACCTGCCGGCGCCCTTCTTGCACGGCCTGGGCATCTACTACTACCCGAAC
CGATGGTGGGCGCTTGCCATCCCGGCCTTTATAACCATGACGCTGTGCTACATCTACGTGGCGCTGGCCTCTTAC
AACACGGAGATTCTGACGCTTCCTATGGCCAGCGTGGAGACAATCGTCGACGGTGCGGGAAAGCTGGCTGTCATC
GATGCCAAGGGCCGGCTTCGTGGCAGCAGCAAGAGAGAGAGGAAGTGTGACAGCAACGGACGCCTGAGATGGAGG
GAGGTCTGGAACGAGGGTACTGATGCCGTGATGGACATTCCTCTTGCGGGAGTGTGCGAGGTTCTTTACGGAGAC
GGGCGCGAAGAACACGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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