© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophcf2|02285 |
| Gene name | |
| Location | scaffold_02:3140541..3141463 |
| Strand | + |
| Gene length (bp) | 922 |
| Transcript length (bp) | 810 |
| Coding sequence length (bp) | 810 |
| Protein length (aa) | 270 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 38 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 25 | 47 | 22 |
| 2 | 88 | 110 | 22 |
| 3 | 123 | 145 | 22 |
| 4 | 179 | 201 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|02285 MKVLLGKNRSYRLMPRAWPRTQRRLLAWLMPVELAMLVPVLVIFGIAQPDLYRTAMWRIGFENKLNSNPNMVLYA YANHRPLPDIPFIWSSTLTSFNVAISIVSLFFLLIKLIAHIMKTWYPVFAVFINAALAVLYAVSVYGQVGPDYAD ARYHTPAVWYLRQGCGLAKEYGKYQACQIAQASLAVTLLLLIVYLVNLGIALHAMFPNEENNVSKDDDEDAATLD SKERGAWEMHNMKAPISTPYTPRTQAFYTLDRQLPLRQPDQSYA* |
| Coding | >Ophcf2|02285 ATGAAGGTCCTCCTCGGCAAAAACCGCTCCTACCGGCTGATGCCGCGAGCCTGGCCCCGAACGCAGAGACGCCTC CTCGCATGGCTCATGCCTGTCGAACTTGCAATGCTGGTGCCCGTCCTCGTCATCTTCGGCATCGCACAGCCCGAC CTATATCGCACCGCCATGTGGCGTATCGGCTTCGAGAATAAGCTCAACTCCAACCCCAACATGGTTCTCTACGCC TACGCCAACCATCGGCCTCTTCCGGATATACCCTTCATCTGGTCTTCGACTCTGACAAGCTTCAACGTTGCCATC TCCATCGTTTCTCTCTTCTTCCTCTTGATCAAGCTCATTGCGCACATTATGAAGACGTGGTACCCCGTCTTTGCC GTCTTCATCAATGCCGCCCTGGCCGTCTTATACGCCGTTAGCGTCTACGGACAGGTCGGGCCCGACTACGCCGAC GCCCGCTATCACACGCCGGCCGTATGGTACTTGCGCCAGGGATGCGGCCTTGCCAAAGAATATGGCAAGTATCAG GCTTGTCAAATCGCCCAGGCTTCCCTCGCCGTCACTCTTCTCTTGCTTATCGTGTATCTGGTCAACTTGGGAATC GCCCTACATGCCATGTTTCCAAACGAGGAAAACAATGTAAGCAAGGATGATGATGAGGACGCCGCCACGCTCGAT TCGAAAGAGAGGGGTGCCTGGGAGATGCATAACATGAAGGCTCCCATCAGCACGCCATACACGCCCAGGACCCAG GCATTTTATACTCTCGACCGGCAGCTACCACTACGGCAGCCAGACCAGTCATACGCTTGA |
| Transcript | >Ophcf2|02285 ATGAAGGTCCTCCTCGGCAAAAACCGCTCCTACCGGCTGATGCCGCGAGCCTGGCCCCGAACGCAGAGACGCCTC CTCGCATGGCTCATGCCTGTCGAACTTGCAATGCTGGTGCCCGTCCTCGTCATCTTCGGCATCGCACAGCCCGAC CTATATCGCACCGCCATGTGGCGTATCGGCTTCGAGAATAAGCTCAACTCCAACCCCAACATGGTTCTCTACGCC TACGCCAACCATCGGCCTCTTCCGGATATACCCTTCATCTGGTCTTCGACTCTGACAAGCTTCAACGTTGCCATC TCCATCGTTTCTCTCTTCTTCCTCTTGATCAAGCTCATTGCGCACATTATGAAGACGTGGTACCCCGTCTTTGCC GTCTTCATCAATGCCGCCCTGGCCGTCTTATACGCCGTTAGCGTCTACGGACAGGTCGGGCCCGACTACGCCGAC GCCCGCTATCACACGCCGGCCGTATGGTACTTGCGCCAGGGATGCGGCCTTGCCAAAGAATATGGCAAGTATCAG GCTTGTCAAATCGCCCAGGCTTCCCTCGCCGTCACTCTTCTCTTGCTTATCGTGTATCTGGTCAACTTGGGAATC GCCCTACATGCCATGTTTCCAAACGAGGAAAACAATGTAAGCAAGGATGATGATGAGGACGCCGCCACGCTCGAT TCGAAAGAGAGGGGTGCCTGGGAGATGCATAACATGAAGGCTCCCATCAGCACGCCATACACGCCCAGGACCCAG GCATTTTATACTCTCGACCGGCAGCTACCACTACGGCAGCCAGACCAGTCATACGCTTGA |
| Gene | >Ophcf2|02285 ATGAAGGTCCTCCTCGGCAAAAACCGCTCCTACCGGCTGATGCCGCGAGCCTGGCCCCGAACGCAGAGACGCCTC CTCGCATGGCTCATGCCTGTCGAACTTGCAATGCTGGTGCCCGTCCTCGTCATCTTCGGCATCGCACAGCCCGAC CTATATCGCACCGCCATGTGGCGTATCGGCTTCGAGAATAAGCTCAACTCCAACCCCAACATGGTTCTCTACGCC TACGCCAACCATCGGCCTCTTCCGGATATACCCTTCATCTGGTCTTCGACGTGGGTCTCTGTCACTCTGATTCTA GCACGCTCCCGACGCTAACATGACGCGCCAGTCTGACAAGCTTCAACGTTGCCATCTCCATCGTTTCTCTCTTCT TCCTCTTGATCAAGCTCATTGCGCACATTATGAAGACGTGGTACCCCGTCTTTGCCGTCTTCATCAATGCCGCCC TGGCCGTCTTATACGCCGTTAGCGTCTACGGACAGGTCGGGCCCGACTACGCCGACGCCCGCTATCACACGCCGG CCGTATGGTACTTGCGCCAGGGATGCGGCCTTGCCAAAGAATATGGCAAGTATCAGGCTTGTCAAATCGCCCAGG CTTCCCTCGCCGTCACTCTTCTCTTGCTGTGGGTTTCTCGCCTGCTGGCATGACCTCAATTCGTGCGCTGACGTG TTGCTTTAGTATCGTGTATCTGGTCAACTTGGGAATCGCCCTACATGCCATGTTTCCAAACGAGGAAAACAATGT AAGCAAGGATGATGATGAGGACGCCGCCACGCTCGATTCGAAAGAGAGGGGTGCCTGGGAGATGCATAACATGAA GGCTCCCATCAGCACGCCATACACGCCCAGGACCCAGGCATTTTATACTCTCGACCGGCAGCTACCACTACGGCA GCCAGACCAGTCATACGCTTGA |