Protein ID | Ophcf2|02213 |
Gene name | |
Location | scaffold_02:2928711..2930521 |
Strand | - |
Gene length (bp) | 1810 |
Transcript length (bp) | 1671 |
Coding sequence length (bp) | 1671 |
Protein length (aa) | 557 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03062 | MBOAT | MBOAT, membrane-bound O-acyltransferase family | 1.4E-37 | 298 | 554 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 103 | 120 | 17 |
2 | 140 | 162 | 22 |
3 | 182 | 201 | 19 |
4 | 206 | 228 | 22 |
5 | 343 | 365 | 22 |
6 | 404 | 426 | 22 |
7 | 533 | 555 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 31.19 | 16.93 | 45.44 |
Alive | In ants, during behavior modification | 54.24 | 30.55 | 77.93 |
Dead | In ants, recently dead | 66.53 | 38.10 | 94.96 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.002287 | yes |
Alive | Dead | 0.220474 | no |
Dead | Fungus | 0.000238 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|02213 MPAPARPPANGTGNDHHVLRPRSRKRLSRRASGPDSEADVPSGMTSGRSTPLPENAPPSAKSLSSARRHARAEQR RRLFPTVEFAERLSHFDPASDYRDFHGFFNLFWIGLAIMGITTMLRNFKDTGYPLRIQIWSLFTVKLWHLAVADF LMVATTAISLPLHRRARSSRGFWTWKRAGMVVQSLYQLAWLVFWIGVPFWFEWTWTAQVFMLLHTMVLLMKMHSY AFYNGHLAEAEKRLRALDNPGSTTAAAVRAPAYQYPSVDLCPGGVSGIPGPARPSKKTDDDDAQQDDVHLLRETL ARELTSPMGNVTYPHNLTWHNYLDYLLCPTLCYELEYPRTTSVNWTSLISKIVATFGCIFLLTVTSEEYILPVLV DASRRLDAVRASSSSSSESLLILAESISWLLFPFMLTFLLVFLVIFEYVLGAFAEITRFADRHFYADWWNSTDWL EFSREWNVPVYSFLRRHVYGASRPHTGKMAATVITFLISAAGHEIIMACITKKIRGYGFVCMMLQLPIMMLQRTR CVRGRQTLNNVCFWCSMIIGLSMMCALYVLV* |
Coding | >Ophcf2|02213 ATGCCGGCTCCGGCCCGTCCGCCGGCCAACGGCACCGGCAACGATCATCATGTCCTCCGCCCGCGCTCGAGAAAG AGACTCTCCCGCCGAGCCTCAGGTCCGGACTCGGAAGCAGACGTGCCCAGCGGCATGACCAGCGGCCGCTCTACT CCCCTCCCCGAAAATGCGCCCCCCTCGGCAAAGTCCCTCTCGTCCGCCCGTAGGCACGCCCGCGCCGAGCAGCGA CGACGCCTCTTCCCGACTGTCGAGTTCGCCGAACGCCTCTCCCACTTCGACCCTGCCAGCGACTACCGCGACTTC CATGGCTTCTTCAACCTCTTCTGGATCGGCCTCGCCATCATGGGCATCACCACCATGCTACGCAACTTCAAAGAC ACGGGCTATCCTCTCCGTATCCAGATCTGGTCCCTCTTCACCGTCAAGCTGTGGCACCTCGCCGTCGCCGACTTC CTCATGGTCGCCACCACCGCCATCAGCCTCCCGCTCCATCGCCGAGCCAGATCCTCTCGCGGCTTCTGGACCTGG AAGCGGGCCGGCATGGTGGTCCAGAGCCTGTACCAGCTCGCCTGGCTCGTCTTCTGGATCGGAGTCCCCTTCTGG TTCGAGTGGACCTGGACGGCCCAAGTCTTCATGCTTCTGCACACAATGGTCCTCCTCATGAAGATGCATTCCTAC GCCTTCTACAACGGCCACCTCGCCGAGGCCGAGAAGCGACTCCGCGCCCTCGACAACCCGGGATCCACCACCGCC GCCGCCGTCCGCGCTCCGGCCTACCAGTACCCCTCCGTCGACCTCTGCCCCGGCGGCGTCTCCGGCATCCCCGGC CCCGCCCGTCCGTCCAAGAAGACCGATGACGATGACGCCCAGCAAGACGACGTCCATCTCCTCCGCGAGACCCTC GCCCGCGAGCTCACCAGCCCCATGGGCAACGTCACCTACCCTCACAACCTCACATGGCACAACTACCTCGACTAC CTGCTCTGTCCGACGCTCTGCTACGAGCTCGAATACCCACGCACCACCTCGGTCAACTGGACCTCGCTCATCTCC AAGATCGTCGCCACCTTTGGCTGCATCTTCCTCCTCACCGTAACATCAGAAGAGTACATCCTGCCCGTCCTCGTC GACGCCTCACGCCGCCTCGACGCCGTCCGCGCCTCCTCGTCATCGTCCTCCGAGTCTCTCCTCATCCTGGCCGAG AGCATCTCCTGGCTCCTCTTCCCCTTCATGCTCACCTTCCTCCTCGTCTTCCTCGTCATCTTCGAGTACGTCCTG GGCGCCTTTGCCGAAATCACCCGCTTCGCCGATCGTCACTTCTACGCCGACTGGTGGAATTCGACCGACTGGCTC GAGTTCTCGCGCGAGTGGAACGTCCCCGTCTACTCCTTTCTCCGACGCCACGTCTACGGTGCCTCACGCCCGCAC ACGGGGAAGATGGCCGCCACCGTCATCACCTTTCTCATCTCCGCCGCCGGCCACGAGATCATCATGGCCTGCATC ACCAAGAAGATCCGCGGCTATGGCTTCGTATGCATGATGCTCCAGCTGCCCATCATGATGCTGCAGCGCACCCGC TGCGTCCGCGGCCGCCAGACGCTCAACAATGTCTGCTTCTGGTGCTCCATGATCATCGGTCTCAGCATGATGTGC GCCCTGTATGTGCTTGTCTAG |
Transcript | >Ophcf2|02213 ATGCCGGCTCCGGCCCGTCCGCCGGCCAACGGCACCGGCAACGATCATCATGTCCTCCGCCCGCGCTCGAGAAAG AGACTCTCCCGCCGAGCCTCAGGTCCGGACTCGGAAGCAGACGTGCCCAGCGGCATGACCAGCGGCCGCTCTACT CCCCTCCCCGAAAATGCGCCCCCCTCGGCAAAGTCCCTCTCGTCCGCCCGTAGGCACGCCCGCGCCGAGCAGCGA CGACGCCTCTTCCCGACTGTCGAGTTCGCCGAACGCCTCTCCCACTTCGACCCTGCCAGCGACTACCGCGACTTC CATGGCTTCTTCAACCTCTTCTGGATCGGCCTCGCCATCATGGGCATCACCACCATGCTACGCAACTTCAAAGAC ACGGGCTATCCTCTCCGTATCCAGATCTGGTCCCTCTTCACCGTCAAGCTGTGGCACCTCGCCGTCGCCGACTTC CTCATGGTCGCCACCACCGCCATCAGCCTCCCGCTCCATCGCCGAGCCAGATCCTCTCGCGGCTTCTGGACCTGG AAGCGGGCCGGCATGGTGGTCCAGAGCCTGTACCAGCTCGCCTGGCTCGTCTTCTGGATCGGAGTCCCCTTCTGG TTCGAGTGGACCTGGACGGCCCAAGTCTTCATGCTTCTGCACACAATGGTCCTCCTCATGAAGATGCATTCCTAC GCCTTCTACAACGGCCACCTCGCCGAGGCCGAGAAGCGACTCCGCGCCCTCGACAACCCGGGATCCACCACCGCC GCCGCCGTCCGCGCTCCGGCCTACCAGTACCCCTCCGTCGACCTCTGCCCCGGCGGCGTCTCCGGCATCCCCGGC CCCGCCCGTCCGTCCAAGAAGACCGATGACGATGACGCCCAGCAAGACGACGTCCATCTCCTCCGCGAGACCCTC GCCCGCGAGCTCACCAGCCCCATGGGCAACGTCACCTACCCTCACAACCTCACATGGCACAACTACCTCGACTAC CTGCTCTGTCCGACGCTCTGCTACGAGCTCGAATACCCACGCACCACCTCGGTCAACTGGACCTCGCTCATCTCC AAGATCGTCGCCACCTTTGGCTGCATCTTCCTCCTCACCGTAACATCAGAAGAGTACATCCTGCCCGTCCTCGTC GACGCCTCACGCCGCCTCGACGCCGTCCGCGCCTCCTCGTCATCGTCCTCCGAGTCTCTCCTCATCCTGGCCGAG AGCATCTCCTGGCTCCTCTTCCCCTTCATGCTCACCTTCCTCCTCGTCTTCCTCGTCATCTTCGAGTACGTCCTG GGCGCCTTTGCCGAAATCACCCGCTTCGCCGATCGTCACTTCTACGCCGACTGGTGGAATTCGACCGACTGGCTC GAGTTCTCGCGCGAGTGGAACGTCCCCGTCTACTCCTTTCTCCGACGCCACGTCTACGGTGCCTCACGCCCGCAC ACGGGGAAGATGGCCGCCACCGTCATCACCTTTCTCATCTCCGCCGCCGGCCACGAGATCATCATGGCCTGCATC ACCAAGAAGATCCGCGGCTATGGCTTCGTATGCATGATGCTCCAGCTGCCCATCATGATGCTGCAGCGCACCCGC TGCGTCCGCGGCCGCCAGACGCTCAACAATGTCTGCTTCTGGTGCTCCATGATCATCGGTCTCAGCATGATGTGC GCCCTGTATGTGCTTGTCTAG |
Gene | >Ophcf2|02213 ATGCCGGCTCCGGCCCGTCCGCCGGCCAACGGCACCGGCAACGATCATCATGTCCTCCGCCCGCGCTCGAGAAAG AGACTCTCCCGCCGAGCCTCAGGTCCGGACTCGGAAGCAGACGTGCCCAGCGGCATGACCAGGTCCGTTTCAGTC TCTTACTCCCCACCCCATCCCATCATCTCTCTCTATACATACTGAACCAGTCCCGTCTTCCTCTTTCCCCCAGCG GCCGCTCTACTCCCCTCCCCGAAAATGCGCCCCCCTCGGCAAAGTCCCTCTCGTCCGCCCGTAGGCACGCCCGCG CCGAGCAGCGACGACGCCTCTTCCCGACTGTCGAGTTCGCCGAACGCCTCTCCCACTTCGACCCTGCCAGCGACT ACCGCGACTTCCATGGCTTCTTCAACCTCTTCTGGATCGGCCTCGCCATCATGGGCATCACCACCATGCTACGCA ACTTCAAAGACACGGGCTATCCTCTCCGTATCCAGATCTGGTCCCTCTTCACCGTCAAGCTGTGGCACCTCGCCG TCGCCGACTTCCTCATGGTCGCCACCACCGCCATCAGCCTCCCGCTCCATCGCCGAGCCAGATCCTCTCGCGGCT TCTGGACCTGGAAGCGGGCCGGCATGGTGGTCCAGAGCCTGTACCAGCTCGCCTGGCTCGTCTTCTGGATCGGAG TCCCCTTCTGGTTCGAGTGGACCTGGACGGCCCAAGTCTTCATGCTTCTGCACACAATGGTCCTCCTCATGAAGA TGCATTCCTACGCCTTCTACAACGGCCACCTCGCCGAGGCCGAGAAGCGACTCCGCGCCCTCGACAACCCGGGAT CCACCACCGCCGCCGCCGTCCGCGCTCCGGCCTACCAGTACCCCTCCGTCGACCTCTGCCCCGGCGGCGTCTCCG GCATCCCCGGCCCCGCCCGTCCGTCCAAGAAGACCGATGACGATGACGCCCAGCAAGACGACGTCCATCTCCTCC GCGAGACCCTCGCCCGCGAGCTCACCAGCCCCATGGGCAACGTCACCTACCCTCACAACCTCACATGGCACAACT ACCTCGACTACCTGCTCTGTCCGACGCTCTGCTACGAGCTCGAATACCCACGCACCACCTCGGTCAACTGGACCT CGCTCATCTCCAAGATCGTCGCCACCTTTGGCTGCATCTTCCTCCTCACCGTAACATCAGAAGAGTACATCCTGC CCGTCCTCGTCGACGCCTCACGCCGCCTCGACGCCGTCCGCGCCTCCTCGTCATCGTCCTCCGAGTCTCTCCTCA TCCTGGCCGAGAGCATCTCCTGGCTCCTCTTCCCCTTCATGCTCACCTTCCTCCTCGTCTTCCTCGTCATCTTCG AGTACGTCCTGGGCGCCTTTGCCGAAATCACCCGCTTCGCCGATCGTCACTTCTACGCCGACTGGTGGAATTCGA CCGACTGGCTCGAGTTCTCGCGCGAGTGGAACGTCCCCGTCTACTCCTTTCTCCGACGCCACGTCTACGGTGCCT CACGCCCGCACACGGGGAAGATGGCCGCCACCGTCATCACCTTTCTCATCTCCGCCGCCGGCCACGAGATCATCA TGGCCTGCATCACCAAGAAGATCCGCGGCTATGGCTTCGTATGCATGATGCTCCAGCTGCCCATCATGATGCTGC AGCGCACCCGCTGCGTCCGCGGCCGCCAGACGCTCAACAATGTCTGCTTCTGGTGCTCCATGATCATCGGTCTCA GCATGGTATGTTGATGGGCCGTCTCCGAGCCGCCGTGTTCGTCGCTGACCTTGACCAGATGTGCGCCCTGTATGT GCTTGTCTAG |