Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02176
Gene name
Locationscaffold_02:2831994..2833504
Strand-
Gene length (bp)1510
Transcript length (bp)1446
Coding sequence length (bp)1446
Protein length (aa) 482

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 41 0.5

Transmembrane Domains

Domain # Start End Length
1 42 64 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02176
MPNSPAIPPCTGKVPSLRPDIIHNHYYTTNPKALPWYRRKPFFWTAIAVLVFIVVAAAVSLGVVLKLELGKSRMR
VDHQTSSSPPATDQNTSSLQTMQPSQTRTSDTSSGAMSSTAGVSSKSSSPSSTTSTETAAATPSVIFTVSEKSRL
ASVYVEDEQANLHRRFLAWQDDKGHLIVTEWSAGNRSHYRIRDQLRSRIPDAKLGSPLAMAASPSGVVHLFFLDT
QDALSHVFRSATGVWETRTLRKGNGPVIASGPSPLSTAWHRTGDGTEVLAIAYANSQDLRLAMTDGPTAESPWLV
SNVVSLPGPVPGQLQEPCFAVAGDWRNAMGARTMLMAVLMEDGLFAYECPIEMWPPGSKTPCRQLNDTFRDDKDR
DVSFVPPPKQLGWIRLDGHHSAGYDFSLVGLGEDGFISENRIGADEARRAGHGLETRMAARAISATDEAVLFAAA
GDDIYMYRLDVDSGTWRAEGSLQLTSRGRTA*
Coding >Ophcf2|02176
ATGCCAAACTCACCCGCGATCCCGCCTTGTACGGGAAAAGTCCCGTCGCTCCGTCCCGACATCATCCACAACCAC
TATTACACGACGAATCCCAAGGCATTGCCCTGGTACCGTCGCAAGCCTTTCTTCTGGACCGCCATCGCAGTCCTC
GTCTTTATCGTCGTCGCAGCCGCCGTCAGTCTCGGCGTCGTTCTCAAGCTCGAGCTCGGAAAGAGCCGGATGCGC
GTTGACCATCAGACAAGTTCCTCCCCGCCTGCGACGGATCAGAACACGTCGTCTTTGCAGACGATGCAGCCTTCT
CAGACTCGGACATCAGACACGTCTTCTGGTGCTATGTCCTCGACAGCCGGCGTCTCGTCAAAATCCTCGTCGCCA
TCATCGACGACGTCGACCGAAACGGCGGCCGCAACACCCTCAGTCATCTTCACCGTGTCTGAGAAGTCCCGGCTA
GCATCGGTATACGTAGAAGACGAGCAAGCAAATCTCCATCGCCGATTTCTGGCCTGGCAAGATGACAAAGGCCAT
CTCATCGTGACGGAGTGGTCAGCCGGCAACAGAAGCCATTACCGTATCCGCGACCAGCTTCGATCCCGGATCCCA
GACGCCAAGCTCGGCTCGCCACTCGCCATGGCAGCCAGTCCCTCCGGCGTCGTCCACCTCTTCTTTCTCGACACG
CAAGACGCGCTCTCTCACGTCTTCCGCTCTGCCACCGGCGTGTGGGAAACGAGAACGCTGAGAAAAGGCAACGGC
CCGGTAATTGCCTCGGGCCCGTCACCCCTATCGACGGCATGGCATCGCACCGGAGACGGAACCGAGGTTCTAGCC
ATCGCCTACGCAAACTCGCAGGATCTGCGTCTGGCCATGACAGATGGTCCGACAGCCGAGTCTCCTTGGTTGGTC
TCAAACGTGGTGTCTCTTCCGGGTCCTGTTCCCGGGCAGTTGCAGGAGCCTTGCTTTGCCGTGGCCGGAGATTGG
CGTAACGCGATGGGAGCCCGTACAATGCTGATGGCTGTCTTGATGGAAGACGGACTATTCGCGTACGAGTGTCCC
ATTGAGATGTGGCCGCCAGGGTCCAAGACGCCGTGTCGCCAACTCAACGACACGTTCCGAGACGACAAGGACCGA
GACGTCAGTTTCGTGCCGCCCCCGAAGCAGCTCGGTTGGATCCGTCTGGACGGCCATCACAGCGCCGGCTACGAC
TTCAGTCTCGTAGGCCTGGGCGAGGACGGCTTCATCAGCGAGAACAGGATCGGTGCCGACGAGGCGAGGAGAGCT
GGGCACGGGTTGGAGACCCGGATGGCTGCGCGGGCCATTTCGGCGACGGACGAGGCTGTCTTGTTTGCGGCGGCG
GGCGACGACATTTACATGTATCGACTGGACGTCGACAGCGGGACTTGGCGGGCGGAGGGGTCGTTGCAACTGACG
TCTCGTGGCAGGACAGCATGA
Transcript >Ophcf2|02176
ATGCCAAACTCACCCGCGATCCCGCCTTGTACGGGAAAAGTCCCGTCGCTCCGTCCCGACATCATCCACAACCAC
TATTACACGACGAATCCCAAGGCATTGCCCTGGTACCGTCGCAAGCCTTTCTTCTGGACCGCCATCGCAGTCCTC
GTCTTTATCGTCGTCGCAGCCGCCGTCAGTCTCGGCGTCGTTCTCAAGCTCGAGCTCGGAAAGAGCCGGATGCGC
GTTGACCATCAGACAAGTTCCTCCCCGCCTGCGACGGATCAGAACACGTCGTCTTTGCAGACGATGCAGCCTTCT
CAGACTCGGACATCAGACACGTCTTCTGGTGCTATGTCCTCGACAGCCGGCGTCTCGTCAAAATCCTCGTCGCCA
TCATCGACGACGTCGACCGAAACGGCGGCCGCAACACCCTCAGTCATCTTCACCGTGTCTGAGAAGTCCCGGCTA
GCATCGGTATACGTAGAAGACGAGCAAGCAAATCTCCATCGCCGATTTCTGGCCTGGCAAGATGACAAAGGCCAT
CTCATCGTGACGGAGTGGTCAGCCGGCAACAGAAGCCATTACCGTATCCGCGACCAGCTTCGATCCCGGATCCCA
GACGCCAAGCTCGGCTCGCCACTCGCCATGGCAGCCAGTCCCTCCGGCGTCGTCCACCTCTTCTTTCTCGACACG
CAAGACGCGCTCTCTCACGTCTTCCGCTCTGCCACCGGCGTGTGGGAAACGAGAACGCTGAGAAAAGGCAACGGC
CCGGTAATTGCCTCGGGCCCGTCACCCCTATCGACGGCATGGCATCGCACCGGAGACGGAACCGAGGTTCTAGCC
ATCGCCTACGCAAACTCGCAGGATCTGCGTCTGGCCATGACAGATGGTCCGACAGCCGAGTCTCCTTGGTTGGTC
TCAAACGTGGTGTCTCTTCCGGGTCCTGTTCCCGGGCAGTTGCAGGAGCCTTGCTTTGCCGTGGCCGGAGATTGG
CGTAACGCGATGGGAGCCCGTACAATGCTGATGGCTGTCTTGATGGAAGACGGACTATTCGCGTACGAGTGTCCC
ATTGAGATGTGGCCGCCAGGGTCCAAGACGCCGTGTCGCCAACTCAACGACACGTTCCGAGACGACAAGGACCGA
GACGTCAGTTTCGTGCCGCCCCCGAAGCAGCTCGGTTGGATCCGTCTGGACGGCCATCACAGCGCCGGCTACGAC
TTCAGTCTCGTAGGCCTGGGCGAGGACGGCTTCATCAGCGAGAACAGGATCGGTGCCGACGAGGCGAGGAGAGCT
GGGCACGGGTTGGAGACCCGGATGGCTGCGCGGGCCATTTCGGCGACGGACGAGGCTGTCTTGTTTGCGGCGGCG
GGCGACGACATTTACATGTATCGACTGGACGTCGACAGCGGGACTTGGCGGGCGGAGGGGTCGTTGCAACTGACG
TCTCGTGGCAGGACAGCATGA
Gene >Ophcf2|02176
ATGCCAAACTCACCCGCGATCCCGCCTTGTACGGGAAAAGTCCCGTCGCTCCGTCCCGACATCATCCACAACCAC
TATTACACGACGAATCCCAAGGCATTGCCCTGGTACCGTCGCAAGCCTTTCTTCTGGACCGCCATCGCAGTCCTC
GTCTTTATCGTCGTCGCAGCCGCCGTCAGTCTCGGCGTCGTTCTCAAGCTCGAGCTCGGAAAGAGCCGGATGCGC
GTTGACCATCAGACAAGTTCCTCCCCGCCTGCGACGGATCAGAACACGTCGTCTTTGCAGACGATGCAGCCTTCT
CAGACTCGGACATCAGACACGTCTTCTGGTGCTATGTCCTCGACAGCCGGCGTCTCGTCAAAATCCTCGTCGCCA
TCATCGACGACGTCGACCGAAACGGCGGCCGCAACACCCTCAGTCATCTTCACCGTGTCTGAGAAGTCCCGGCTA
GCATCGGTATACGTAGAAGACGAGCAAGCAAATCTCCATCGCCGATTTCTGGCCTGGCAAGATGACAAAGGCCAT
CTCATCGTGACGGAGTGGTCAGCCGGCAACAGAAGCCATTACCGTATCCGCGACCAGCTTCGATCCCGGATCCCA
GACGCCAAGCTCGGCTCGCCACTCGCCATGGCAGCCAGTCCCTCCGGCGTCGTCCACCTCTTCTTTCTCGACACG
CAAGACGCGCTCTCTCACGTCTTCCGCTCTGCCACCGGCGTGTGGGAAACGAGAACGCTGAGAAAAGGCAACGGC
CCGGTAATTGCCTCGGGCCCGTCACCCCTATCGACGGCATGGCATCGCACCGGAGACGGAACCGAGGTTCTAGCC
ATCGCCTACGCAAACTCGCAGGATCTGCGTCTGGCCATGACAGATGGTCCGACAGCCGAGTCTCCTTGGTTGGTC
TCAAACGTGGTGTCTCTTCCGGGTCCTGTTCCCGGGCAGTTGCAGGAGCCTTGCTTTGCCGTGGCCGGAGATTGG
CGTAACGCGATGGGAGCCCGTACAATGCTGATGGCTGTCTTGATGGAAGACGGACTATTCGCGTACGAGTGTCCC
ATTGAGATGTGGCCGCCAGGGTCCAAGACGCCGTGTCGCCAACTCAACGACACGTTCCGAGGTGAACATCTCTTC
TCCTCCCCTTCACCGCTGAATGAACAGCAAGACGCTGACAAGACTTGCAGACGACAAGGACCGAGACGTCAGTTT
CGTGCCGCCCCCGAAGCAGCTCGGTTGGATCCGTCTGGACGGCCATCACAGCGCCGGCTACGACTTCAGTCTCGT
AGGCCTGGGCGAGGACGGCTTCATCAGCGAGAACAGGATCGGTGCCGACGAGGCGAGGAGAGCTGGGCACGGGTT
GGAGACCCGGATGGCTGCGCGGGCCATTTCGGCGACGGACGAGGCTGTCTTGTTTGCGGCGGCGGGCGACGACAT
TTACATGTATCGACTGGACGTCGACAGCGGGACTTGGCGGGCGGAGGGGTCGTTGCAACTGACGTCTCGTGGCAG
GACAGCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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