Protein ID | Ophcf2|02171 |
Gene name | |
Location | scaffold_02:2819308..2820361 |
Strand | + |
Gene length (bp) | 1053 |
Transcript length (bp) | 1053 |
Coding sequence length (bp) | 1053 |
Protein length (aa) | 351 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07859 | Abhydrolase_3 | alpha/beta hydrolase fold | 9.6E-48 | 95 | 316 |
PF20434 | BD-FAE | BD-FAE | 2.8E-16 | 81 | 188 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016787 | hydrolase activity | Yes |
GO:0003674 | molecular_function | No |
GO:0003824 | catalytic activity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | Peroxisomal targeting signal | 0.7023 | 0.3348 | 0.0831 | 0.027 | 0.4171 | 0.0991 | 0.0753 | 0.1302 | 0.1578 | 0.2243 |
Gene cluster ID | Type of secondary metabolism gene |
---|---|
Cluster 8 | (None) |
Orthofinder run ID | 4 |
Orthogroup | 841 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|02171 MAQHEALQPIHPSMAGKLDPVFEELYNQHVAKTAAQPVNLDRLRASYSTLYSYGTGPAPEVGRVYDADVPADDGA RLAVRVYEPAASPGPWPVHINFHGGGWGLGDLETEAHVCRHLCAKAGVAVIDVAYRLVPEFAFPTAVTDGFAALR HVRDAEGARRFKVRSESISLGGVSAGGCIALALAHMARDERPDPIPLRIVVASTPVIDDISRYSSAADSPFASMR ENEMAPTLNWARLAWFDKLKWSTGGDQQRQQAGWLANLLSAPRYDGLAKTVIYTAGADPLRDEGERYAQLLMNNG VEVTARRYPGVPHPFIHMDKHLWQARDLIDRTARELRLAHWEPLVTDSRF* |
Coding | >Ophcf2|02171 ATGGCACAGCACGAGGCGCTGCAGCCGATCCACCCGTCTATGGCGGGCAAGCTGGATCCCGTCTTCGAGGAGCTG TACAACCAGCACGTGGCCAAGACGGCGGCCCAGCCCGTGAACCTCGACCGGTTGCGGGCCTCGTACTCGACCCTC TATAGCTACGGAACCGGCCCGGCTCCGGAAGTGGGTCGCGTCTACGATGCCGACGTTCCGGCCGACGACGGCGCC CGGCTGGCGGTTCGTGTCTACGAGCCAGCCGCCTCGCCCGGTCCGTGGCCCGTCCACATCAACTTCCACGGTGGC GGCTGGGGTCTAGGCGACCTCGAGACCGAGGCCCACGTGTGCAGACACCTCTGTGCCAAGGCCGGCGTCGCCGTC ATCGACGTGGCCTACCGCCTGGTGCCCGAGTTTGCCTTCCCAACGGCCGTGACCGACGGGTTTGCGGCCTTGCGT CACGTCCGCGACGCCGAGGGCGCCCGGCGGTTCAAGGTCCGCTCCGAAAGCATCTCGCTGGGCGGCGTCTCGGCC GGCGGCTGCATCGCCCTGGCATTGGCGCACATGGCGCGCGATGAGCGGCCGGACCCTATTCCCCTGCGGATCGTC GTCGCCTCCACGCCCGTCATCGACGACATCTCGCGGTACAGCTCAGCGGCCGACTCGCCCTTTGCCTCGATGCGA GAGAACGAGATGGCGCCGACGCTCAACTGGGCTCGGCTCGCCTGGTTCGACAAGCTCAAATGGTCGACGGGAGGC GACCAACAGCGGCAGCAGGCCGGCTGGTTGGCCAACCTGCTCAGCGCGCCGCGCTACGACGGCCTGGCCAAGACG GTCATCTACACGGCGGGGGCAGACCCGCTGCGCGATGAAGGCGAGCGGTACGCGCAGCTGCTCATGAACAACGGT GTCGAGGTGACGGCCAGGCGCTATCCCGGGGTGCCGCACCCCTTTATCCACATGGACAAGCATCTGTGGCAGGCC AGGGACTTGATCGACCGCACGGCCCGGGAGCTTCGTCTGGCGCACTGGGAGCCCTTGGTGACCGACAGCCGATTC TAG |
Transcript | >Ophcf2|02171 ATGGCACAGCACGAGGCGCTGCAGCCGATCCACCCGTCTATGGCGGGCAAGCTGGATCCCGTCTTCGAGGAGCTG TACAACCAGCACGTGGCCAAGACGGCGGCCCAGCCCGTGAACCTCGACCGGTTGCGGGCCTCGTACTCGACCCTC TATAGCTACGGAACCGGCCCGGCTCCGGAAGTGGGTCGCGTCTACGATGCCGACGTTCCGGCCGACGACGGCGCC CGGCTGGCGGTTCGTGTCTACGAGCCAGCCGCCTCGCCCGGTCCGTGGCCCGTCCACATCAACTTCCACGGTGGC GGCTGGGGTCTAGGCGACCTCGAGACCGAGGCCCACGTGTGCAGACACCTCTGTGCCAAGGCCGGCGTCGCCGTC ATCGACGTGGCCTACCGCCTGGTGCCCGAGTTTGCCTTCCCAACGGCCGTGACCGACGGGTTTGCGGCCTTGCGT CACGTCCGCGACGCCGAGGGCGCCCGGCGGTTCAAGGTCCGCTCCGAAAGCATCTCGCTGGGCGGCGTCTCGGCC GGCGGCTGCATCGCCCTGGCATTGGCGCACATGGCGCGCGATGAGCGGCCGGACCCTATTCCCCTGCGGATCGTC GTCGCCTCCACGCCCGTCATCGACGACATCTCGCGGTACAGCTCAGCGGCCGACTCGCCCTTTGCCTCGATGCGA GAGAACGAGATGGCGCCGACGCTCAACTGGGCTCGGCTCGCCTGGTTCGACAAGCTCAAATGGTCGACGGGAGGC GACCAACAGCGGCAGCAGGCCGGCTGGTTGGCCAACCTGCTCAGCGCGCCGCGCTACGACGGCCTGGCCAAGACG GTCATCTACACGGCGGGGGCAGACCCGCTGCGCGATGAAGGCGAGCGGTACGCGCAGCTGCTCATGAACAACGGT GTCGAGGTGACGGCCAGGCGCTATCCCGGGGTGCCGCACCCCTTTATCCACATGGACAAGCATCTGTGGCAGGCC AGGGACTTGATCGACCGCACGGCCCGGGAGCTTCGTCTGGCGCACTGGGAGCCCTTGGTGACCGACAGCCGATTC TAG |
Gene | >Ophcf2|02171 ATGGCACAGCACGAGGCGCTGCAGCCGATCCACCCGTCTATGGCGGGCAAGCTGGATCCCGTCTTCGAGGAGCTG TACAACCAGCACGTGGCCAAGACGGCGGCCCAGCCCGTGAACCTCGACCGGTTGCGGGCCTCGTACTCGACCCTC TATAGCTACGGAACCGGCCCGGCTCCGGAAGTGGGTCGCGTCTACGATGCCGACGTTCCGGCCGACGACGGCGCC CGGCTGGCGGTTCGTGTCTACGAGCCAGCCGCCTCGCCCGGTCCGTGGCCCGTCCACATCAACTTCCACGGTGGC GGCTGGGGTCTAGGCGACCTCGAGACCGAGGCCCACGTGTGCAGACACCTCTGTGCCAAGGCCGGCGTCGCCGTC ATCGACGTGGCCTACCGCCTGGTGCCCGAGTTTGCCTTCCCAACGGCCGTGACCGACGGGTTTGCGGCCTTGCGT CACGTCCGCGACGCCGAGGGCGCCCGGCGGTTCAAGGTCCGCTCCGAAAGCATCTCGCTGGGCGGCGTCTCGGCC GGCGGCTGCATCGCCCTGGCATTGGCGCACATGGCGCGCGATGAGCGGCCGGACCCTATTCCCCTGCGGATCGTC GTCGCCTCCACGCCCGTCATCGACGACATCTCGCGGTACAGCTCAGCGGCCGACTCGCCCTTTGCCTCGATGCGA GAGAACGAGATGGCGCCGACGCTCAACTGGGCTCGGCTCGCCTGGTTCGACAAGCTCAAATGGTCGACGGGAGGC GACCAACAGCGGCAGCAGGCCGGCTGGTTGGCCAACCTGCTCAGCGCGCCGCGCTACGACGGCCTGGCCAAGACG GTCATCTACACGGCGGGGGCAGACCCGCTGCGCGATGAAGGCGAGCGGTACGCGCAGCTGCTCATGAACAACGGT GTCGAGGTGACGGCCAGGCGCTATCCCGGGGTGCCGCACCCCTTTATCCACATGGACAAGCATCTGTGGCAGGCC AGGGACTTGATCGACCGCACGGCCCGGGAGCTTCGTCTGGCGCACTGGGAGCCCTTGGTGACCGACAGCCGATTC TAG |