Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02169
Gene name
Locationscaffold_02:2811780..2813381
Strand-
Gene length (bp)1601
Transcript length (bp)1359
Coding sequence length (bp)1359
Protein length (aa) 453

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01494 FAD_binding_3 FAD binding domain 3.4E-27 7 336

GO

GO Term Description Terminal node
GO:0071949 FAD binding Yes
GO:0000166 nucleotide binding No
GO:1901363 heterocyclic compound binding No
GO:0043168 anion binding No
GO:0050660 flavin adenine dinucleotide binding No
GO:0043167 ion binding No
GO:0003674 molecular_function No
GO:1901265 nucleoside phosphate binding No
GO:0036094 small molecule binding No
GO:0005488 binding No
GO:0097159 organic cyclic compound binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02169
MSVEPFKIIIVGGSITGLTLAHSLHRIGVDFIVLEKRSEIVLQEGASIGILPNGARILDQLGLYTLIKQATGSLG
ASDLYFPDGFRFRSLYPTRVFETFGYPISFMERRRLLGILYAALPDKTKIKTGQHVISVETEARGEKGPIRVRTM
DGDVYDGDLVVGADGVHSRIRDEMWRLLGPEMAARGREAISAEYSCCFGISDGVAELEAGEQMMRLDDGRALLVI
PSRDQVVYWLCTQKLDRRYAYGEIPRFTAQQAEALCSQLADTALTETLCFGHVWERRKSYNMVAMEEYLLPKWSS
GRIVCIGDSAHKMTVNFGQGANSAMEDAAALTNHIYTSLLQQGVTKPTDEQMTKLLHRLQERQMPRISRIAGASW
AAARVHARDGFVFKLVGRYLMPSRVWGGLVDARAFGLMADATALDMLSLPLGLGPGWNKYADKGKGKGTFSYMYA
YM*
Coding >Ophcf2|02169
ATGTCCGTCGAACCCTTCAAGATTATCATCGTCGGCGGCTCCATCACGGGCCTCACGCTGGCCCATAGCCTGCAT
CGAATCGGGGTCGACTTCATTGTTCTAGAGAAGAGATCCGAGATCGTGCTGCAAGAGGGAGCTTCCATCGGCATT
CTACCAAACGGGGCGCGGATCCTAGACCAGCTCGGTCTGTACACCTTGATCAAGCAGGCTACGGGATCCCTCGGG
GCGTCAGATCTCTACTTTCCCGATGGCTTTCGGTTCAGGAGTTTGTATCCTACGAGGGTGTTTGAGACCTTCGGA
TATCCCATCTCATTCATGGAGAGAAGAAGACTGCTCGGCATTCTCTACGCTGCCCTCCCCGACAAGACAAAGATC
AAGACTGGCCAACACGTCATCAGCGTCGAAACAGAGGCACGGGGAGAGAAAGGCCCTATCCGAGTCCGGACTATG
GACGGAGATGTCTACGACGGCGACCTCGTTGTCGGGGCTGACGGGGTGCATAGTCGGATCAGAGACGAGATGTGG
CGGCTTTTAGGTCCTGAGATGGCCGCGAGAGGTAGAGAAGCCATCTCGGCTGAATATTCCTGCTGTTTCGGCATC
TCCGACGGGGTTGCCGAGCTGGAAGCCGGAGAGCAGATGATGCGATTGGACGACGGACGAGCGTTGCTGGTGATT
CCGTCCAGAGACCAAGTCGTCTACTGGCTCTGCACGCAGAAGCTAGATCGAAGATACGCATACGGTGAAATCCCT
CGCTTTACAGCCCAGCAAGCTGAAGCTCTATGCTCGCAGCTGGCGGATACGGCTCTAACAGAGACGCTCTGCTTC
GGACATGTATGGGAGAGGCGGAAGTCTTACAATATGGTTGCCATGGAGGAGTATCTTCTTCCGAAGTGGTCCTCT
GGAAGAATCGTCTGCATCGGAGACAGCGCTCACAAGATGACCGTCAACTTCGGCCAAGGCGCCAACAGCGCCATG
GAAGACGCAGCCGCTTTAACAAACCACATCTACACCTCACTCCTGCAACAAGGCGTGACGAAGCCAACAGACGAG
CAGATGACCAAGCTCCTACACCGCCTACAAGAAAGGCAAATGCCCAGAATCTCGCGAATCGCGGGCGCCTCGTGG
GCGGCGGCGCGCGTACATGCGAGAGACGGCTTCGTGTTCAAGCTGGTCGGGAGGTATCTGATGCCATCACGGGTT
TGGGGGGGTTTGGTGGATGCTCGGGCTTTCGGGCTCATGGCTGATGCTACGGCTTTGGACATGTTGTCGCTGCCG
TTGGGTTTGGGACCGGGTTGGAACAAGTATGCTGACAAGGGTAAGGGGAAGGGGACTTTTTCTTACATGTACGCG
TACATGTAA
Transcript >Ophcf2|02169
ATGTCCGTCGAACCCTTCAAGATTATCATCGTCGGCGGCTCCATCACGGGCCTCACGCTGGCCCATAGCCTGCAT
CGAATCGGGGTCGACTTCATTGTTCTAGAGAAGAGATCCGAGATCGTGCTGCAAGAGGGAGCTTCCATCGGCATT
CTACCAAACGGGGCGCGGATCCTAGACCAGCTCGGTCTGTACACCTTGATCAAGCAGGCTACGGGATCCCTCGGG
GCGTCAGATCTCTACTTTCCCGATGGCTTTCGGTTCAGGAGTTTGTATCCTACGAGGGTGTTTGAGACCTTCGGA
TATCCCATCTCATTCATGGAGAGAAGAAGACTGCTCGGCATTCTCTACGCTGCCCTCCCCGACAAGACAAAGATC
AAGACTGGCCAACACGTCATCAGCGTCGAAACAGAGGCACGGGGAGAGAAAGGCCCTATCCGAGTCCGGACTATG
GACGGAGATGTCTACGACGGCGACCTCGTTGTCGGGGCTGACGGGGTGCATAGTCGGATCAGAGACGAGATGTGG
CGGCTTTTAGGTCCTGAGATGGCCGCGAGAGGTAGAGAAGCCATCTCGGCTGAATATTCCTGCTGTTTCGGCATC
TCCGACGGGGTTGCCGAGCTGGAAGCCGGAGAGCAGATGATGCGATTGGACGACGGACGAGCGTTGCTGGTGATT
CCGTCCAGAGACCAAGTCGTCTACTGGCTCTGCACGCAGAAGCTAGATCGAAGATACGCATACGGTGAAATCCCT
CGCTTTACAGCCCAGCAAGCTGAAGCTCTATGCTCGCAGCTGGCGGATACGGCTCTAACAGAGACGCTCTGCTTC
GGACATGTATGGGAGAGGCGGAAGTCTTACAATATGGTTGCCATGGAGGAGTATCTTCTTCCGAAGTGGTCCTCT
GGAAGAATCGTCTGCATCGGAGACAGCGCTCACAAGATGACCGTCAACTTCGGCCAAGGCGCCAACAGCGCCATG
GAAGACGCAGCCGCTTTAACAAACCACATCTACACCTCACTCCTGCAACAAGGCGTGACGAAGCCAACAGACGAG
CAGATGACCAAGCTCCTACACCGCCTACAAGAAAGGCAAATGCCCAGAATCTCGCGAATCGCGGGCGCCTCGTGG
GCGGCGGCGCGCGTACATGCGAGAGACGGCTTCGTGTTCAAGCTGGTCGGGAGGTATCTGATGCCATCACGGGTT
TGGGGGGGTTTGGTGGATGCTCGGGCTTTCGGGCTCATGGCTGATGCTACGGCTTTGGACATGTTGTCGCTGCCG
TTGGGTTTGGGACCGGGTTGGAACAAGTATGCTGACAAGGGTAAGGGGAAGGGGACTTTTTCTTACATGTACGCG
TACATGTAA
Gene >Ophcf2|02169
ATGTCCGTCGAACCCTTCAAGATTATCATCGTCGGCGGCTCCATCACGGGCCTCACGCTGGCCCATAGCCTGCAT
CGAATCGGGGTCGACTTCATTGTTCTAGAGAAGAGATCCGAGATCGTGCTGCAAGAGGGAGCTTCCATCGGCATT
CTACCAAACGGGGCGCGGATCCTAGACCAGCTCGGTCTGTACACCTTGATCAAGCAGGCTACGGGATCCCTCGGG
GCGTCAGATCTCTACTTTCCCGATGGCTTTCGGTTCAGGAGTTTGTATCCTACGAGGGTGTTTGAGACGTGCGTT
GAGTTGAAGGCGTGGAGACAGAGCCCCCGTCTGCTAACTTGTTTGATCTCACAGCTTCGGATATCCCATCTCATT
CATGGAGAGAAGAAGACTGCTCGGCATTCTCTACGCTGCCCTCCCCGACAAGACAAAGATCAAGACTGGCCAACA
CGTCATCAGCGTCGAAACAGAGGCACGGGGAGAGAAAGGCCCTATCCGAGTCCGGACTATGGACGGAGATGTCTA
CGACGGCGACCTCGTTGTCGGGGCTGACGGGGTGCATAGTCGGATCAGAGACGAGATGTGGCGGCTTTTAGGTCC
TGAGATGGCCGCGAGAGGTAGAGAAGGTAAGTCTTGGTAAGGATGTCTTGGTAAGGATGCCATCCATAAGACCGG
ACTAATATCGTATTACAGCCATCTCGGCTGAATATTCCTGCTGTTTCGGCATCTCCGACGGGGTTGCCGAGCTGG
AAGCCGGAGAGCAGATGATGCGATTGGACGACGGACGAGCGTTGCTGGTGATTCCGTCCAGAGACCAAGTCGTCT
ACTGGCTCTGCACGCAGAAGCTAGATCGAAGATACGCATACGGTGAAATCCCTCGCTTTACAGCCCAGCAAGCTG
AAGCTCTATGCTCGCAGCTGGCGGATACGGCTCTAACAGAGACGCTCTGCTTCGGACATGTATGGGAGAGGCGGA
AGTCTTACAATATGGTTGCCATGGAGGAGTATCTTCTTCCGAAGTGGTCCTCTGGAAGAATCGTCTGCATCGGAG
ACAGCGCTCACAAGGTCTCAGCCATGATGAAGCAAAAGTTGATCTTCCGAGTGCTAACCAATCGACGATAGATGA
CCGTCAACTTCGGCCAAGGCGCCAACAGCGCCATGGAAGACGCAGCCGCTTTAACAAACCACATCTACACCTCAC
TCCTGCAACAAGGCGTGACGAAGCCAACAGACGAGCAGATGACCAAGCTCCTACACCGCCTACAAGAAAGGCAAA
TGCCCAGAATCTCGCGAATCGCGGGCGCCTCGTGGGCGGCGGCGCGCGTACATGCGAGAGACGGCTTCGTGTTCA
AGCTGGTCGGGAGGTATCTGATGCCATCACGGGTTTGGGGGGGTTTGGTGGATGCTCGGGCTTTCGGGCTCATGG
CTGATGCTACGGCTTTGGACATGTTGTCGCTGCCGTTGGGTTTGGGACCGGGTTGGAACAAGTATGCTGACAAGG
GTAAGGGGAAGGGGTTCATGCTTGGATTATACGCCTTGTTATTCGTCTTCTCGTTACTGCTGTTTCTTAGGACTT
TTTCTTACATGTACGCGTACATGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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