Protein ID | Ophcf2|02167 |
Gene name | |
Location | scaffold_02:2808734..2809784 |
Strand | - |
Gene length (bp) | 1050 |
Transcript length (bp) | 1050 |
Coding sequence length (bp) | 1050 |
Protein length (aa) | 350 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 20 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 0.01 | 0.00 | 0.14 |
Alive | In ants, during behavior modification | 53.65 | 27.66 | 79.63 |
Dead | In ants, recently dead | 34.74 | 15.28 | 54.19 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.095668 | no |
Alive | Dead | 0.023715 | yes |
Dead | Fungus | 0.095668 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|02167 MLLQLLYMALSATAACWKAHDPVAIARNKTTALANTIKVDWANPPSYSHTRRESSCHHYTVAFQCHRTAFISSER LLPLDGKRLKKALKIDYDILPQRSFLNINTDSVLVTLGEAEWENQSKDDLWLASALVTNMGTIRISMAKSLDDRL MTSRIKSHGLQGECPGGHECHFESWIFYTVFEGPCLRQAIINSCDGSDDERYLINACEWVNLPPDSYRDAVEREY DYISSHSRHDYSSVYSTGEKRPWPGNLRCSQYYKWAWKTCRDPKGPRFDDMARCTFRTPILRDGEPLSTTVFIKQ DRRGKRRRSVDETRESKSELTDFKVDIVWGFDGVDADGRVVFREPDRKV* |
Coding | >Ophcf2|02167 ATGCTTCTCCAGCTTCTTTACATGGCCCTGTCTGCTACTGCCGCATGTTGGAAAGCCCACGACCCTGTGGCCATT GCCAGAAACAAGACAACCGCTCTGGCCAACACCATCAAAGTAGACTGGGCCAACCCCCCGTCCTACAGTCATACA CGCAGGGAAAGCAGTTGCCACCATTACACAGTTGCTTTTCAATGCCATAGAACGGCCTTCATCAGCAGCGAGAGA CTGTTGCCGCTGGACGGGAAGAGGTTAAAGAAGGCCTTGAAGATCGACTACGATATCCTCCCCCAACGGAGCTTC CTGAACATCAACACGGATAGCGTGCTCGTGACTCTGGGGGAGGCCGAATGGGAAAACCAGAGCAAGGATGATTTG TGGCTCGCCTCGGCCCTCGTCACCAACATGGGAACCATACGGATTTCCATGGCCAAGAGTCTCGACGACCGTCTC ATGACGTCGAGAATCAAGTCCCATGGCCTTCAAGGAGAGTGCCCGGGCGGTCACGAATGTCACTTCGAGTCGTGG ATCTTCTATACCGTATTCGAGGGACCGTGCCTACGTCAAGCCATCATCAACAGCTGCGATGGATCAGACGACGAG AGATATCTCATCAATGCTTGTGAATGGGTCAATCTACCGCCTGATAGTTACAGAGACGCCGTAGAAAGGGAGTAC GACTACATCTCATCCCATTCAAGACACGACTATTCCTCCGTGTACTCGACGGGCGAAAAACGTCCCTGGCCTGGG AATCTGCGTTGCTCGCAGTACTACAAATGGGCTTGGAAGACGTGCCGCGATCCTAAGGGGCCACGCTTCGATGAC ATGGCCAGGTGCACGTTCCGGACTCCCATCCTGAGGGACGGAGAGCCGCTGTCGACGACCGTCTTTATCAAGCAG GACCGTCGGGGGAAGCGGAGGCGGAGCGTGGATGAGACGAGGGAGTCCAAGTCGGAGTTGACGGACTTCAAGGTC GATATAGTATGGGGCTTTGATGGCGTGGACGCGGATGGTAGGGTGGTGTTTCGGGAGCCGGACAGGAAGGTGTGA |
Transcript | >Ophcf2|02167 ATGCTTCTCCAGCTTCTTTACATGGCCCTGTCTGCTACTGCCGCATGTTGGAAAGCCCACGACCCTGTGGCCATT GCCAGAAACAAGACAACCGCTCTGGCCAACACCATCAAAGTAGACTGGGCCAACCCCCCGTCCTACAGTCATACA CGCAGGGAAAGCAGTTGCCACCATTACACAGTTGCTTTTCAATGCCATAGAACGGCCTTCATCAGCAGCGAGAGA CTGTTGCCGCTGGACGGGAAGAGGTTAAAGAAGGCCTTGAAGATCGACTACGATATCCTCCCCCAACGGAGCTTC CTGAACATCAACACGGATAGCGTGCTCGTGACTCTGGGGGAGGCCGAATGGGAAAACCAGAGCAAGGATGATTTG TGGCTCGCCTCGGCCCTCGTCACCAACATGGGAACCATACGGATTTCCATGGCCAAGAGTCTCGACGACCGTCTC ATGACGTCGAGAATCAAGTCCCATGGCCTTCAAGGAGAGTGCCCGGGCGGTCACGAATGTCACTTCGAGTCGTGG ATCTTCTATACCGTATTCGAGGGACCGTGCCTACGTCAAGCCATCATCAACAGCTGCGATGGATCAGACGACGAG AGATATCTCATCAATGCTTGTGAATGGGTCAATCTACCGCCTGATAGTTACAGAGACGCCGTAGAAAGGGAGTAC GACTACATCTCATCCCATTCAAGACACGACTATTCCTCCGTGTACTCGACGGGCGAAAAACGTCCCTGGCCTGGG AATCTGCGTTGCTCGCAGTACTACAAATGGGCTTGGAAGACGTGCCGCGATCCTAAGGGGCCACGCTTCGATGAC ATGGCCAGGTGCACGTTCCGGACTCCCATCCTGAGGGACGGAGAGCCGCTGTCGACGACCGTCTTTATCAAGCAG GACCGTCGGGGGAAGCGGAGGCGGAGCGTGGATGAGACGAGGGAGTCCAAGTCGGAGTTGACGGACTTCAAGGTC GATATAGTATGGGGCTTTGATGGCGTGGACGCGGATGGTAGGGTGGTGTTTCGGGAGCCGGACAGGAAGGTGTGA |
Gene | >Ophcf2|02167 ATGCTTCTCCAGCTTCTTTACATGGCCCTGTCTGCTACTGCCGCATGTTGGAAAGCCCACGACCCTGTGGCCATT GCCAGAAACAAGACAACCGCTCTGGCCAACACCATCAAAGTAGACTGGGCCAACCCCCCGTCCTACAGTCATACA CGCAGGGAAAGCAGTTGCCACCATTACACAGTTGCTTTTCAATGCCATAGAACGGCCTTCATCAGCAGCGAGAGA CTGTTGCCGCTGGACGGGAAGAGGTTAAAGAAGGCCTTGAAGATCGACTACGATATCCTCCCCCAACGGAGCTTC CTGAACATCAACACGGATAGCGTGCTCGTGACTCTGGGGGAGGCCGAATGGGAAAACCAGAGCAAGGATGATTTG TGGCTCGCCTCGGCCCTCGTCACCAACATGGGAACCATACGGATTTCCATGGCCAAGAGTCTCGACGACCGTCTC ATGACGTCGAGAATCAAGTCCCATGGCCTTCAAGGAGAGTGCCCGGGCGGTCACGAATGTCACTTCGAGTCGTGG ATCTTCTATACCGTATTCGAGGGACCGTGCCTACGTCAAGCCATCATCAACAGCTGCGATGGATCAGACGACGAG AGATATCTCATCAATGCTTGTGAATGGGTCAATCTACCGCCTGATAGTTACAGAGACGCCGTAGAAAGGGAGTAC GACTACATCTCATCCCATTCAAGACACGACTATTCCTCCGTGTACTCGACGGGCGAAAAACGTCCCTGGCCTGGG AATCTGCGTTGCTCGCAGTACTACAAATGGGCTTGGAAGACGTGCCGCGATCCTAAGGGGCCACGCTTCGATGAC ATGGCCAGGTGCACGTTCCGGACTCCCATCCTGAGGGACGGAGAGCCGCTGTCGACGACCGTCTTTATCAAGCAG GACCGTCGGGGGAAGCGGAGGCGGAGCGTGGATGAGACGAGGGAGTCCAAGTCGGAGTTGACGGACTTCAAGGTC GATATAGTATGGGGCTTTGATGGCGTGGACGCGGATGGTAGGGTGGTGTTTCGGGAGCCGGACAGGAAGGTGTGA |