Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|02166
Gene name
Location	scaffold_02:2807839..2808643
Strand	+
Gene length (bp)	804
Transcript length (bp)	618
Coding sequence length (bp)	618
Protein length (aa)	206

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 50	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	15	37	22
2	114	136	22
3	165	187	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|02166 MNVVHPSQAPPEYQSVAWIADTCKLLMGLGWTVNYIGMISKSLRQKTYAMSLMALCCNFAWEATYALVYPFGTRL EKWVHYSGLLLNCGVMYTAVRHAPGEWAHAPLVQRNLRLIFVLCVAGCMSAHLALAVQLGPRLAQAWSAYGYVLR YRYWRKDHEWMASPLYIWFVCTFLVLDGSYGLCLWLVRRFESEQQTAKAPSLKRN*
Coding	>Ophcf2\|02166 ATGAACGTCGTCCACCCCTCCCAAGCCCCCCCCGAATACCAATCCGTCGCCTGGATAGCAGACACATGCAAGCTC CTCATGGGCCTCGGCTGGACCGTCAACTACATAGGCATGATCTCAAAGTCCCTCCGCCAAAAAACATACGCCATG TCCCTCATGGCCCTCTGCTGCAACTTCGCCTGGGAAGCCACCTACGCCCTCGTCTACCCGTTCGGCACCCGCCTC GAGAAATGGGTGCACTACTCGGGCCTCCTGCTCAACTGCGGCGTCATGTATACGGCTGTCCGCCACGCGCCGGGC GAGTGGGCTCACGCGCCGCTGGTGCAGCGCAACCTGAGACTCATCTTCGTCCTCTGTGTTGCTGGCTGCATGTCG GCTCATCTGGCCTTGGCTGTCCAGCTCGGGCCGCGTCTTGCTCAGGCGTGGAGCGCGTACGGGTACGTCCTGCGG TACCGATATTGGAGGAAAGATCACGAATGGATGGCGTCCCCCCTTTATATCTGGTTCGTCTGCACATTCCTCGTT CTCGACGGCTCCTACGGCCTCTGCCTGTGGCTGGTCCGTCGGTTCGAGTCGGAGCAACAGACAGCCAAAGCTCCA AGTTTGAAGAGAAATTGA
Transcript	>Ophcf2\|02166 ATGAACGTCGTCCACCCCTCCCAAGCCCCCCCCGAATACCAATCCGTCGCCTGGATAGCAGACACATGCAAGCTC CTCATGGGCCTCGGCTGGACCGTCAACTACATAGGCATGATCTCAAAGTCCCTCCGCCAAAAAACATACGCCATG TCCCTCATGGCCCTCTGCTGCAACTTCGCCTGGGAAGCCACCTACGCCCTCGTCTACCCGTTCGGCACCCGCCTC GAGAAATGGGTGCACTACTCGGGCCTCCTGCTCAACTGCGGCGTCATGTATACGGCTGTCCGCCACGCGCCGGGC GAGTGGGCTCACGCGCCGCTGGTGCAGCGCAACCTGAGACTCATCTTCGTCCTCTGTGTTGCTGGCTGCATGTCG GCTCATCTGGCCTTGGCTGTCCAGCTCGGGCCGCGTCTTGCTCAGGCGTGGAGCGCGTACGGGTACGTCCTGCGG TACCGATATTGGAGGAAAGATCACGAATGGATGGCGTCCCCCCTTTATATCTGGTTCGTCTGCACATTCCTCGTT CTCGACGGCTCCTACGGCCTCTGCCTGTGGCTGGTCCGTCGGTTCGAGTCGGAGCAACAGACAGCCAAAGCTCCA AGTTTGAAGAGAAATTGA
Gene	>Ophcf2\|02166 ATGAACGTCGTCCACCCCTCCCAAGCCCCCCCCGAATACCAATCCGTCGCCTGGATAGCAGACACATGCAAGCTC CTCATGGGCCTCGGCTGGACCGTCAACTACATAGGCATGATCTCAAAGTCCCTCCGCCAAAAAACATACGCCATG TCCCTCATGGCCCTCTGCTGCAACTTCGCCTGGGAAGCCACCTACGCCCTCGTCTACCCGTTCGGCACCCGCCTC GAGAAATGGGTGCACTACTCGGGCCTCCTGCTCAACTGCGGCGTCATGTATACGGCTGTCCGCCACGCGCCGGGC GAGTGGGCTCACGCGCCGCTGGTGCAGCGCAACCTGAGACTCATCTTCGTCCTCTGTGTTGCTGGCTGCATGTCG GCTCATCTGGCCTTGGCTGTCCAGCTCGGGCCGCGTCTTGCTCAGGCGTGGAGCGCGTACGGGTGTCAGTTGCTG TTGAGTGTTGGCGGGTTGTGCCAGCTTATAAGTCGGGGGCACTCTCGGGGGGCGTCGTATCATCTTTGGTGAGTC GTTGATCTGTTTCCTTCTGGCTATCTTGTCATGTTTCTCATCATGGGGGGGGAGGCCAGGTTGTCTCGCTTCTTG GGATCGCTCGTGCTCGTGCCTCAAGACGTCCTGCGGTACCGATATTGGAGGAAAGATCACGAATGGATGGCGTCC CCCCTTTATATCTGGTTCGTCTGCACATTCCTCGTTCTCGACGGCTCCTACGGCCTCTGCCTGTGGCTGGTCCGT CGGTTCGAGTCGGAGCAACAGACAGCCAAAGCTCCAAGTTTGAAGAGAAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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