Protein ID | Ophcf2|02163 |
Gene name | |
Location | scaffold_02:2802959..2804332 |
Strand | + |
Gene length (bp) | 1373 |
Transcript length (bp) | 993 |
Coding sequence length (bp) | 993 |
Protein length (aa) | 331 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00106 | adh_short | short chain dehydrogenase | 8.5E-28 | 55 | 241 |
PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 3.2E-18 | 61 | 214 |
PF08659 | KR | KR domain | 6.3E-08 | 57 | 173 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 9 | 31 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|02163 MLPPCVRRLCIRLLDLVQGCLLYIPLIIIFVRSRCKSSPGRKPWDESQIPALDGKVVVVTGANTGIGHQTARHLA LHGARVYLAARREEAAKTAIRRLAEEHPSIPRHNLIWLPLDLASQASVSRAARELRAKEKRLDILVNNAGVDPYE YCRTSDGFEMAMAVNHIGHWTLTYCLLPLLKKTAAEAGSDVRVVTTLRYGTSKQANILFASELQRRLDAENHDII SLSVQPGIVRTRGASRAMPWVARPLLWLFSDASSDQGARTSLFAATAEEVKRHGEAWKGRYLDGPGEVGVPSLRA RDWGLACNLWHLTEGAVRATGALDKVVVKV* |
Coding | >Ophcf2|02163 ATGCTTCCGCCTTGCGTACGCCGCTTGTGCATCCGACTCTTGGACCTTGTTCAAGGCTGTCTCCTCTACATCCCC CTAATCATCATCTTTGTTCGAAGTCGCTGCAAGTCCAGCCCGGGACGTAAGCCATGGGACGAGTCTCAGATACCA GCCCTCGATGGCAAGGTGGTCGTCGTGACGGGAGCCAACACGGGTATCGGCCATCAGACGGCCAGACACCTGGCA TTGCATGGCGCCAGGGTCTATCTCGCAGCCAGGAGGGAAGAAGCTGCAAAGACGGCAATCCGGCGTCTCGCCGAG GAGCATCCGTCGATACCGAGGCATAACCTGATTTGGCTGCCTCTCGATCTGGCCAGCCAGGCCAGCGTGTCTCGG GCGGCTCGCGAGTTGCGGGCTAAAGAGAAGCGACTGGATATACTTGTCAACAACGCGGGAGTCGATCCCTATGAA TACTGTAGGACCTCGGATGGATTCGAGATGGCGATGGCGGTTAATCATATTGGCCACTGGACTTTGACGTATTGC CTGCTGCCCCTGCTGAAGAAAACTGCGGCCGAGGCAGGCTCTGATGTTCGCGTCGTCACGACGCTCCGCTACGGA ACCTCCAAACAAGCCAACATCCTATTCGCATCCGAGCTCCAGCGCCGCCTCGACGCCGAAAACCACGACATCATC TCGCTGTCCGTCCAACCGGGCATCGTGAGGACGAGGGGAGCATCCCGGGCGATGCCCTGGGTGGCACGACCACTG CTCTGGCTGTTCTCCGACGCTTCTTCGGATCAGGGGGCTCGGACGTCGTTGTTTGCCGCGACGGCGGAGGAGGTG AAGCGTCATGGGGAGGCTTGGAAGGGTCGCTATTTGGATGGGCCGGGGGAGGTTGGGGTTCCTTCTTTGAGGGCG CGGGATTGGGGGTTGGCTTGTAATTTGTGGCATCTTACTGAAGGGGCTGTGAGAGCGACGGGGGCTTTGGACAAG GTTGTTGTCAAGGTGTGA |
Transcript | >Ophcf2|02163 ATGCTTCCGCCTTGCGTACGCCGCTTGTGCATCCGACTCTTGGACCTTGTTCAAGGCTGTCTCCTCTACATCCCC CTAATCATCATCTTTGTTCGAAGTCGCTGCAAGTCCAGCCCGGGACGTAAGCCATGGGACGAGTCTCAGATACCA GCCCTCGATGGCAAGGTGGTCGTCGTGACGGGAGCCAACACGGGTATCGGCCATCAGACGGCCAGACACCTGGCA TTGCATGGCGCCAGGGTCTATCTCGCAGCCAGGAGGGAAGAAGCTGCAAAGACGGCAATCCGGCGTCTCGCCGAG GAGCATCCGTCGATACCGAGGCATAACCTGATTTGGCTGCCTCTCGATCTGGCCAGCCAGGCCAGCGTGTCTCGG GCGGCTCGCGAGTTGCGGGCTAAAGAGAAGCGACTGGATATACTTGTCAACAACGCGGGAGTCGATCCCTATGAA TACTGTAGGACCTCGGATGGATTCGAGATGGCGATGGCGGTTAATCATATTGGCCACTGGACTTTGACGTATTGC CTGCTGCCCCTGCTGAAGAAAACTGCGGCCGAGGCAGGCTCTGATGTTCGCGTCGTCACGACGCTCCGCTACGGA ACCTCCAAACAAGCCAACATCCTATTCGCATCCGAGCTCCAGCGCCGCCTCGACGCCGAAAACCACGACATCATC TCGCTGTCCGTCCAACCGGGCATCGTGAGGACGAGGGGAGCATCCCGGGCGATGCCCTGGGTGGCACGACCACTG CTCTGGCTGTTCTCCGACGCTTCTTCGGATCAGGGGGCTCGGACGTCGTTGTTTGCCGCGACGGCGGAGGAGGTG AAGCGTCATGGGGAGGCTTGGAAGGGTCGCTATTTGGATGGGCCGGGGGAGGTTGGGGTTCCTTCTTTGAGGGCG CGGGATTGGGGGTTGGCTTGTAATTTGTGGCATCTTACTGAAGGGGCTGTGAGAGCGACGGGGGCTTTGGACAAG GTTGTTGTCAAGGTGTGA |
Gene | >Ophcf2|02163 ATGCTTCCGCCTTGCGTACGCCGCTTGTGCATCCGACTCTTGGACCTTGTTCAAGGCTGTCTCCTCTACATCCCC CTAATCATCATCTTTGTTCGAAGTCGCTGCAAGTCCAGCCCGGGACGTAAGCCATGGGACGAGTCTCAGATACCA GCCCTCGATGGCAAGGTGGTCGTCGTGACGGGAGCCAAGTTTGTCAACTTCCACGCCATGAATCGCGCGGCCTGA CGGCAGATGCAGCACGGGTATCGGCCATCAGACGGCCAGACACCTGGCATTGCATGGCGCCAGGGTCTATCTCGC AGCCAGGAGGGAAGAAGCTGCAAAGACGGCAATCCGGCGTCTCGCCGAGGAGCATCCGTCGATACCGAGGCATAA CCTGATTTGGCTGCCTCTCGATCTGGCCAGCCAGGCCAGCGTGTCTCGGGCGGCTCGCGAGTTGCGGGCTAAAGA GAAGCGACTGGATATACTTGGTATGTGTTGACGTCGAGGTTGACTGGTTGAATTGAAGAGGGATTGATATTGCTG AGAGAGGACAGTCAACAACGCGGGAGTCGATCCCTATGAATACTGTAGGACCTCGGATGGATTCGAGATGGCGAT GGCGGTTAAGTGAGACATGTCGTGGTTGCTTCTGCCCCGTTGACACCTTTGTTGACTCGATACTGTTGCGGATCG GGCAGTCATATTGGCCACTGGACTTTGACGTATTGCCTGCTGCCCCTGCTGAAGAAAACTGCGGCCGAGGCAGGC TCTGATGTTCGCGTCGTCACGGTAAGTCTCCTGACTCTCGACTCGAATCCCGAGCATAACACAACACGTACATGC ATTCGTACTAAGCCATCGTCAACCCCCCCAAGCTATCATCACGAGCCGAGGCATACTCCTCCGGAAACCGCTTCA CCTCCCCCAAAGACCTTGACGACGCCTGCACCCTCCGCGGATGGGAAGACTCATGTCTCGGCCAGACGCTCCGCT ACGGAACCTCCAAACAAGCCAACATCCTATTCGCATCCGAGCTCCAGCGCCGCCTCGACGCCGAAAACCACGACA TCATCTCGCTGTCCGTCCAACCGGGCATCGTGAGGACGAGGGGAGCATCCCGGGCGATGCCCTGGGTGGCACGAC CACTGCTCTGGCTGTTCTCCGACGCTTCTTCGGATCAGGGGGCTCGGACGTCGTTGTTTGCCGCGACGGCGGAGG AGGTGAAGCGTCATGGGGAGGCTTGGAAGGGTCGCTATTTGGATGGGCCGGGGGAGGTTGGGGTTCCTTCTTTGA GGGCGCGGGATTGGGGGTTGGCTTGTAATTTGTGGCATCTTACTGAAGGGGCTGTGAGAGCGACGGGGGCTTTGG ACAAGGTTGTTGTCAAGGTGTGA |