Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02163
Gene name
Locationscaffold_02:2802959..2804332
Strand+
Gene length (bp)1373
Transcript length (bp)993
Coding sequence length (bp)993
Protein length (aa) 331

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 8.5E-28 55 241
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 3.2E-18 61 214
PF08659 KR KR domain 6.3E-08 57 173

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 9 31 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02163
MLPPCVRRLCIRLLDLVQGCLLYIPLIIIFVRSRCKSSPGRKPWDESQIPALDGKVVVVTGANTGIGHQTARHLA
LHGARVYLAARREEAAKTAIRRLAEEHPSIPRHNLIWLPLDLASQASVSRAARELRAKEKRLDILVNNAGVDPYE
YCRTSDGFEMAMAVNHIGHWTLTYCLLPLLKKTAAEAGSDVRVVTTLRYGTSKQANILFASELQRRLDAENHDII
SLSVQPGIVRTRGASRAMPWVARPLLWLFSDASSDQGARTSLFAATAEEVKRHGEAWKGRYLDGPGEVGVPSLRA
RDWGLACNLWHLTEGAVRATGALDKVVVKV*
Coding >Ophcf2|02163
ATGCTTCCGCCTTGCGTACGCCGCTTGTGCATCCGACTCTTGGACCTTGTTCAAGGCTGTCTCCTCTACATCCCC
CTAATCATCATCTTTGTTCGAAGTCGCTGCAAGTCCAGCCCGGGACGTAAGCCATGGGACGAGTCTCAGATACCA
GCCCTCGATGGCAAGGTGGTCGTCGTGACGGGAGCCAACACGGGTATCGGCCATCAGACGGCCAGACACCTGGCA
TTGCATGGCGCCAGGGTCTATCTCGCAGCCAGGAGGGAAGAAGCTGCAAAGACGGCAATCCGGCGTCTCGCCGAG
GAGCATCCGTCGATACCGAGGCATAACCTGATTTGGCTGCCTCTCGATCTGGCCAGCCAGGCCAGCGTGTCTCGG
GCGGCTCGCGAGTTGCGGGCTAAAGAGAAGCGACTGGATATACTTGTCAACAACGCGGGAGTCGATCCCTATGAA
TACTGTAGGACCTCGGATGGATTCGAGATGGCGATGGCGGTTAATCATATTGGCCACTGGACTTTGACGTATTGC
CTGCTGCCCCTGCTGAAGAAAACTGCGGCCGAGGCAGGCTCTGATGTTCGCGTCGTCACGACGCTCCGCTACGGA
ACCTCCAAACAAGCCAACATCCTATTCGCATCCGAGCTCCAGCGCCGCCTCGACGCCGAAAACCACGACATCATC
TCGCTGTCCGTCCAACCGGGCATCGTGAGGACGAGGGGAGCATCCCGGGCGATGCCCTGGGTGGCACGACCACTG
CTCTGGCTGTTCTCCGACGCTTCTTCGGATCAGGGGGCTCGGACGTCGTTGTTTGCCGCGACGGCGGAGGAGGTG
AAGCGTCATGGGGAGGCTTGGAAGGGTCGCTATTTGGATGGGCCGGGGGAGGTTGGGGTTCCTTCTTTGAGGGCG
CGGGATTGGGGGTTGGCTTGTAATTTGTGGCATCTTACTGAAGGGGCTGTGAGAGCGACGGGGGCTTTGGACAAG
GTTGTTGTCAAGGTGTGA
Transcript >Ophcf2|02163
ATGCTTCCGCCTTGCGTACGCCGCTTGTGCATCCGACTCTTGGACCTTGTTCAAGGCTGTCTCCTCTACATCCCC
CTAATCATCATCTTTGTTCGAAGTCGCTGCAAGTCCAGCCCGGGACGTAAGCCATGGGACGAGTCTCAGATACCA
GCCCTCGATGGCAAGGTGGTCGTCGTGACGGGAGCCAACACGGGTATCGGCCATCAGACGGCCAGACACCTGGCA
TTGCATGGCGCCAGGGTCTATCTCGCAGCCAGGAGGGAAGAAGCTGCAAAGACGGCAATCCGGCGTCTCGCCGAG
GAGCATCCGTCGATACCGAGGCATAACCTGATTTGGCTGCCTCTCGATCTGGCCAGCCAGGCCAGCGTGTCTCGG
GCGGCTCGCGAGTTGCGGGCTAAAGAGAAGCGACTGGATATACTTGTCAACAACGCGGGAGTCGATCCCTATGAA
TACTGTAGGACCTCGGATGGATTCGAGATGGCGATGGCGGTTAATCATATTGGCCACTGGACTTTGACGTATTGC
CTGCTGCCCCTGCTGAAGAAAACTGCGGCCGAGGCAGGCTCTGATGTTCGCGTCGTCACGACGCTCCGCTACGGA
ACCTCCAAACAAGCCAACATCCTATTCGCATCCGAGCTCCAGCGCCGCCTCGACGCCGAAAACCACGACATCATC
TCGCTGTCCGTCCAACCGGGCATCGTGAGGACGAGGGGAGCATCCCGGGCGATGCCCTGGGTGGCACGACCACTG
CTCTGGCTGTTCTCCGACGCTTCTTCGGATCAGGGGGCTCGGACGTCGTTGTTTGCCGCGACGGCGGAGGAGGTG
AAGCGTCATGGGGAGGCTTGGAAGGGTCGCTATTTGGATGGGCCGGGGGAGGTTGGGGTTCCTTCTTTGAGGGCG
CGGGATTGGGGGTTGGCTTGTAATTTGTGGCATCTTACTGAAGGGGCTGTGAGAGCGACGGGGGCTTTGGACAAG
GTTGTTGTCAAGGTGTGA
Gene >Ophcf2|02163
ATGCTTCCGCCTTGCGTACGCCGCTTGTGCATCCGACTCTTGGACCTTGTTCAAGGCTGTCTCCTCTACATCCCC
CTAATCATCATCTTTGTTCGAAGTCGCTGCAAGTCCAGCCCGGGACGTAAGCCATGGGACGAGTCTCAGATACCA
GCCCTCGATGGCAAGGTGGTCGTCGTGACGGGAGCCAAGTTTGTCAACTTCCACGCCATGAATCGCGCGGCCTGA
CGGCAGATGCAGCACGGGTATCGGCCATCAGACGGCCAGACACCTGGCATTGCATGGCGCCAGGGTCTATCTCGC
AGCCAGGAGGGAAGAAGCTGCAAAGACGGCAATCCGGCGTCTCGCCGAGGAGCATCCGTCGATACCGAGGCATAA
CCTGATTTGGCTGCCTCTCGATCTGGCCAGCCAGGCCAGCGTGTCTCGGGCGGCTCGCGAGTTGCGGGCTAAAGA
GAAGCGACTGGATATACTTGGTATGTGTTGACGTCGAGGTTGACTGGTTGAATTGAAGAGGGATTGATATTGCTG
AGAGAGGACAGTCAACAACGCGGGAGTCGATCCCTATGAATACTGTAGGACCTCGGATGGATTCGAGATGGCGAT
GGCGGTTAAGTGAGACATGTCGTGGTTGCTTCTGCCCCGTTGACACCTTTGTTGACTCGATACTGTTGCGGATCG
GGCAGTCATATTGGCCACTGGACTTTGACGTATTGCCTGCTGCCCCTGCTGAAGAAAACTGCGGCCGAGGCAGGC
TCTGATGTTCGCGTCGTCACGGTAAGTCTCCTGACTCTCGACTCGAATCCCGAGCATAACACAACACGTACATGC
ATTCGTACTAAGCCATCGTCAACCCCCCCAAGCTATCATCACGAGCCGAGGCATACTCCTCCGGAAACCGCTTCA
CCTCCCCCAAAGACCTTGACGACGCCTGCACCCTCCGCGGATGGGAAGACTCATGTCTCGGCCAGACGCTCCGCT
ACGGAACCTCCAAACAAGCCAACATCCTATTCGCATCCGAGCTCCAGCGCCGCCTCGACGCCGAAAACCACGACA
TCATCTCGCTGTCCGTCCAACCGGGCATCGTGAGGACGAGGGGAGCATCCCGGGCGATGCCCTGGGTGGCACGAC
CACTGCTCTGGCTGTTCTCCGACGCTTCTTCGGATCAGGGGGCTCGGACGTCGTTGTTTGCCGCGACGGCGGAGG
AGGTGAAGCGTCATGGGGAGGCTTGGAAGGGTCGCTATTTGGATGGGCCGGGGGAGGTTGGGGTTCCTTCTTTGA
GGGCGCGGGATTGGGGGTTGGCTTGTAATTTGTGGCATCTTACTGAAGGGGCTGTGAGAGCGACGGGGGCTTTGG
ACAAGGTTGTTGTCAAGGTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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