© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophcf2|02158 |
| Gene name | |
| Location | scaffold_02:2785428..2787983 |
| Strand | - |
| Gene length (bp) | 2555 |
| Transcript length (bp) | 1905 |
| Coding sequence length (bp) | 1905 |
| Protein length (aa) | 635 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.0E-88 | 119 | 572 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.9E-08 | 122 | 404 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 56 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 189 | 211 | 22 |
| 2 | 254 | 273 | 19 |
| 3 | 278 | 300 | 22 |
| 4 | 368 | 390 | 22 |
| 5 | 405 | 427 | 22 |
| 6 | 434 | 456 | 22 |
| 7 | 466 | 488 | 22 |
| 8 | 508 | 530 | 22 |
| 9 | 535 | 557 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|02158 MAEISPEPKALHGEHLEEKGVSHTEVIDVGKNLEARIRNPLQGIPRWQLMRDVEAFAEYRGLQEHVQLLKKGALV AQNPAQAHAIDGPETLTQDELDALYIEKHHRWRLPMRLFLTIATCSIGAAVQGWDQTGSNGATIFFPRAFGLDPD NNNRHSLIVGLLNAGPYIGSSLVGCWLSDPLNNWLGRRGTIFFSAHFCIWPVIGSALCRTWQQQMICRLLMGVGM GTKASTVPIYAAENAPASIRGALVMSWQMWTAFGIMLGTAFNLAVFYIRDYNWRLMLGAPFIPAVPLLLLIYLCP ESPRWLMKKNRYVEAWNSMIVLRNHPLQVARDIFYISAQLEIEKELIGKTNYLTRFTQLFTIPRIRRANLAAFTV MIAQQMCGINIIAFYSTTIFVDAGLGNFKAMIGSFGFGLVNWLFAFPAFWTIDTFGRRSLLLFTFPQMFWTLVVA GLCTLMPKGTLDDPNNARTALVCLFVFLFGAFYSPGEGPVPFTYSAEVYPLSHRETGMGFAVATCLFWAAVLGTS FPFLLKQLHAVGAFGLYGGFNVIAFFMIFLWVPETMQRTLEELDDVFAVPVRKFAAYQLTETIPWVMKRYVLMQR HATRPPLYEFETAASETEPQAFATSASEDKKVKM* |
| Coding | >Ophcf2|02158 ATGGCAGAAATCAGCCCAGAGCCCAAGGCTCTACATGGAGAGCATTTGGAGGAGAAGGGCGTCTCCCACACCGAG GTCATCGATGTCGGCAAGAATCTCGAGGCCAGGATTCGAAATCCTCTTCAGGGCATCCCTCGTTGGCAGCTTATG CGCGACGTCGAGGCCTTTGCCGAATATCGAGGTCTCCAGGAACACGTCCAGCTCCTCAAGAAGGGCGCCCTGGTG GCCCAGAATCCCGCTCAGGCACACGCCATCGATGGCCCCGAGACGCTCACTCAGGACGAGCTTGATGCTCTCTAC ATCGAGAAGCATCACCGGTGGCGCTTGCCCATGCGCCTCTTCCTCACCATTGCCACATGCTCCATCGGAGCCGCC GTTCAGGGCTGGGATCAGACGGGTAGCAATGGAGCTACCATTTTCTTCCCCAGGGCCTTTGGGCTAGATCCGGAC AATAACAATCGTCATTCGCTCATCGTCGGTCTTCTGAACGCCGGTCCATATATCGGCAGCTCGTTGGTCGGATGC TGGCTGTCAGATCCGCTCAACAATTGGCTTGGACGCCGAGGTACCATCTTCTTCTCCGCTCACTTCTGCATCTGG CCCGTCATCGGCTCCGCTCTCTGCCGGACCTGGCAGCAGCAGATGATCTGTCGCCTTCTTATGGGCGTCGGTATG GGCACCAAGGCGTCCACTGTTCCCATCTACGCCGCCGAGAACGCCCCGGCCTCGATAAGAGGTGCCCTCGTCATG TCGTGGCAGATGTGGACCGCATTCGGCATCATGCTGGGTACTGCTTTCAACCTGGCCGTCTTTTACATCAGGGAC TATAACTGGCGGCTGATGCTTGGCGCGCCATTTATCCCGGCCGTCCCGCTGCTCCTCCTCATCTACCTCTGCCCT GAATCACCCCGTTGGTTGATGAAGAAGAATCGCTACGTTGAGGCTTGGAATTCGATGATTGTGCTACGAAACCAC CCGTTGCAGGTGGCAAGAGACATTTTCTACATCAGCGCGCAGCTTGAGATCGAAAAGGAGCTCATCGGCAAGACA AATTACCTGACGCGTTTTACCCAGCTCTTTACCATTCCTCGCATTCGACGGGCAAACTTGGCCGCCTTTACCGTT ATGATTGCGCAGCAGATGTGTGGAATCAATATCATCGCCTTCTACTCTACCACCATTTTCGTCGATGCTGGACTC GGCAACTTTAAGGCCATGATTGGATCGTTTGGGTTCGGCCTCGTTAATTGGCTTTTTGCTTTTCCAGCTTTTTGG ACCATTGATACCTTTGGCCGACGAAGCTTGCTTCTATTTACTTTTCCGCAGATGTTCTGGACGCTGGTCGTCGCT GGACTTTGCACTCTCATGCCCAAGGGGACGTTGGACGATCCCAACAATGCGCGAACGGCACTCGTCTGTCTATTC GTCTTCCTCTTTGGCGCCTTTTACTCCCCCGGAGAGGGTCCCGTTCCATTCACATATAGCGCCGAGGTCTACCCG CTATCTCACCGCGAGACGGGCATGGGCTTTGCCGTGGCTACCTGTTTGTTCTGGGCCGCCGTTCTGGGTACTTCG TTCCCCTTCCTCCTCAAGCAGCTGCATGCCGTGGGCGCCTTTGGGCTTTACGGCGGCTTCAACGTCATCGCCTTC TTCATGATCTTTCTCTGGGTGCCGGAAACGATGCAGCGAACTCTGGAGGAGCTCGACGACGTCTTCGCCGTTCCC GTCCGCAAGTTTGCCGCCTACCAGCTGACGGAAACGATTCCGTGGGTGATGAAGCGATACGTCCTCATGCAACGG CACGCCACCAGGCCGCCTCTGTACGAGTTTGAGACGGCGGCTAGCGAGACGGAGCCCCAGGCTTTCGCTACGAGC GCCTCCGAGGATAAGAAGGTGAAGATGTGA |
| Transcript | >Ophcf2|02158 ATGGCAGAAATCAGCCCAGAGCCCAAGGCTCTACATGGAGAGCATTTGGAGGAGAAGGGCGTCTCCCACACCGAG GTCATCGATGTCGGCAAGAATCTCGAGGCCAGGATTCGAAATCCTCTTCAGGGCATCCCTCGTTGGCAGCTTATG CGCGACGTCGAGGCCTTTGCCGAATATCGAGGTCTCCAGGAACACGTCCAGCTCCTCAAGAAGGGCGCCCTGGTG GCCCAGAATCCCGCTCAGGCACACGCCATCGATGGCCCCGAGACGCTCACTCAGGACGAGCTTGATGCTCTCTAC ATCGAGAAGCATCACCGGTGGCGCTTGCCCATGCGCCTCTTCCTCACCATTGCCACATGCTCCATCGGAGCCGCC GTTCAGGGCTGGGATCAGACGGGTAGCAATGGAGCTACCATTTTCTTCCCCAGGGCCTTTGGGCTAGATCCGGAC AATAACAATCGTCATTCGCTCATCGTCGGTCTTCTGAACGCCGGTCCATATATCGGCAGCTCGTTGGTCGGATGC TGGCTGTCAGATCCGCTCAACAATTGGCTTGGACGCCGAGGTACCATCTTCTTCTCCGCTCACTTCTGCATCTGG CCCGTCATCGGCTCCGCTCTCTGCCGGACCTGGCAGCAGCAGATGATCTGTCGCCTTCTTATGGGCGTCGGTATG GGCACCAAGGCGTCCACTGTTCCCATCTACGCCGCCGAGAACGCCCCGGCCTCGATAAGAGGTGCCCTCGTCATG TCGTGGCAGATGTGGACCGCATTCGGCATCATGCTGGGTACTGCTTTCAACCTGGCCGTCTTTTACATCAGGGAC TATAACTGGCGGCTGATGCTTGGCGCGCCATTTATCCCGGCCGTCCCGCTGCTCCTCCTCATCTACCTCTGCCCT GAATCACCCCGTTGGTTGATGAAGAAGAATCGCTACGTTGAGGCTTGGAATTCGATGATTGTGCTACGAAACCAC CCGTTGCAGGTGGCAAGAGACATTTTCTACATCAGCGCGCAGCTTGAGATCGAAAAGGAGCTCATCGGCAAGACA AATTACCTGACGCGTTTTACCCAGCTCTTTACCATTCCTCGCATTCGACGGGCAAACTTGGCCGCCTTTACCGTT ATGATTGCGCAGCAGATGTGTGGAATCAATATCATCGCCTTCTACTCTACCACCATTTTCGTCGATGCTGGACTC GGCAACTTTAAGGCCATGATTGGATCGTTTGGGTTCGGCCTCGTTAATTGGCTTTTTGCTTTTCCAGCTTTTTGG ACCATTGATACCTTTGGCCGACGAAGCTTGCTTCTATTTACTTTTCCGCAGATGTTCTGGACGCTGGTCGTCGCT GGACTTTGCACTCTCATGCCCAAGGGGACGTTGGACGATCCCAACAATGCGCGAACGGCACTCGTCTGTCTATTC GTCTTCCTCTTTGGCGCCTTTTACTCCCCCGGAGAGGGTCCCGTTCCATTCACATATAGCGCCGAGGTCTACCCG CTATCTCACCGCGAGACGGGCATGGGCTTTGCCGTGGCTACCTGTTTGTTCTGGGCCGCCGTTCTGGGTACTTCG TTCCCCTTCCTCCTCAAGCAGCTGCATGCCGTGGGCGCCTTTGGGCTTTACGGCGGCTTCAACGTCATCGCCTTC TTCATGATCTTTCTCTGGGTGCCGGAAACGATGCAGCGAACTCTGGAGGAGCTCGACGACGTCTTCGCCGTTCCC GTCCGCAAGTTTGCCGCCTACCAGCTGACGGAAACGATTCCGTGGGTGATGAAGCGATACGTCCTCATGCAACGG CACGCCACCAGGCCGCCTCTGTACGAGTTTGAGACGGCGGCTAGCGAGACGGAGCCCCAGGCTTTCGCTACGAGC GCCTCCGAGGATAAGAAGGTGAAGATGTGA |
| Gene | >Ophcf2|02158 ATGGCAGAAATCAGGTTGGTAGACCTGGTTACGCCTGCCTGATCTTGTCTCGCTCACATGTCGTGCTTCTAGCCC AGAGCCCAAGGCTCTACATGGAGAGCATTTGGAGGAGAAGGGCGTCTCCCACACCGAGGTCATCGATGTCGGCAA GAATCTCGAGGCCAGGTACGTAGAAAGGGCGGGAGCACAGAGGCAAGATCTAGCCGTCTAACGGTGGCCTCAAGG ATTCGAAATCCTCTTCAGGGCATCCCTCGTTGGCAGCTTATGCGCGACGTCGAGGCCTTTGCCGAATATCGAGGT CTCCAGGAACACGTCCAGCTCCTCAAGAAGGGCGCCCTGGTGGCCCAGAATCCCGCTCAGGCACACGCCATCGAT GGCCCCGAGACGCTCACTCAGGACGAGCTTGATGCTCTCTACATCGAGAAGCATCACCGGTGGCGCTTGCCCATG CGCCTCTTCCTCACCATTGCCACATGCTCCATCGGAGCCGCCGTTCAGGGCTGGGATCAGACGGGTAGCAATGGA GCTACCATTTTCTTCCCCAGGGCCTTTGGGCTAGATCCGGACAATAACAATCGTCATTCGCTCATCGTCGGTCTT CTGAACGCCGGTCCATATATCGGCAGCTCGTGCGTTGATAAGACCCTGCTCTCCTCCCTGCGTCGTCATGCCCTG ACGCGGTAGCAGGTTGGTCGGATGCTGGCTGTCAGATCCGCTCAACAATTGGCTTGGACGCCGAGGTAGACATCC CGTGCTCCTCATCTGTGGCAGAGCCAGACTGACGCTGTATTCGAGGTACCATCTTCTTCTCCGCTCACTTCTGCA TCTGGCCCGTCATCGGCTCCGCTCTCTGCCGGACCTGGCAGCAGCAGATGATCTGTCGCCTTCTTATGGGCGTCG GTATGGGCACCAAGGCGTCCACTGTTCCCATCTACGCCGCCGAGAACGCCCCGGCCTCGATAAGAGGTGCCCTCG TCATGTCGTGGCGTACGTGTCGTTGCAGTTGCTGAGGCCTTTTCTGATGGCTGACGTTTAAGCAGAGATGTGGAC CGCATTCGGCATCATGCTGGGTACTGCTTTCAACCTGGCCGTCTTTTACATCAGGGACTATAACTGGCGGCTGAT GCTTGGTAAGAGATGAGATGCTTCGCCCCTTGTTGCTCACCGACATTGAAGAGGAGTCACTGACAGGTGAACGTC CCTTCGCCTAGGCGCGCCATTTATCCCGGCCGTCCCGCTGCTCCTCCTCATCTACCTCTGCCCTGAATCACCCCG TTGGTTGATGAAGAAGAATCGCTACGTTGAGGCTTGGAATTCGATGATTGTGCTACGAAACCACCCGTTGCAGGT GGCAAGAGACATTTTCTACATCAGCGCGCAGCTTGAGATCGAAAAGGAGCTCATCGGCAAGACAAATTACCTGAC GCGTTTTACCCAGCTCTTTACCATTCCTCGCATTCGACGGGCAAACTTGGCCGCCTTTACCGTTATGATTGCGCA GCAGATGTGTGGTGGGTTTTTTTCATGAATTCTACGAATGATGCGAAACTAATAAGGGGACTCAGGAATCAATAT CATCGCCTTCTACTCTACCACCATTTTCGTCGATGCTGGACTCGGCAACTTTAAGGCCATGATTGGATCGTTTGG GTTCGGCCTCGTTAATTGGCTTTTTGCTTTTCCAGCTTTTTGGACCATTGATACCGTATGCCGCCGCTGAGTCGC GAGAGACGAGACGTTGCGTGCTGACGGATATGATAGTTTGGCCGACGAAGCTTGCTTCTATTTACTTTTCCGCAG ATGGTATGTTAGCGGTCATGTCAAAAAAGCTCCAGAAGTCTGCTGCTAACGCGGACTTGCAGTTCTGGACGCTGG TCGTCGCTGGACTTTGCACTCTCATGCCCAAGGGGACGTTGGACGATCCCAACAATGCGCGAACGGCACTCGTCT GTCTATTCGTCTTCCTCTTTGGCGGTGAGTCTAATTAAGAAAGACTTCGATCACCAGGAATGACGTGCTAACTGT CTCACGACAGCCTTTTACTCCCCCGGAGAGGGTCCCGTTCCATTCACATATAGCGCCGAGGTCTACCCGCTATCT CACCGCGAGACGGGCATGGGCTTTGCCGTGGCTACCTGTTTGTTCTGGGTGCGTGTCGCGGAGTCCCTGATTCGG TAGAAGGCTGTGCGCTGACGATTCATCAGGCCGCCGTTCTGGGTACTTCGTTCCCCTTCCTCCTCAAGCAGCTGC ATGCCGTGGGCGCCTTTGGGCTTTACGGCGGCTTCAACGTCATCGCCTTCTTCATGATCTTTCTCTGGGTGCCGG AAACGATGCAGCGAACTCTGGAGGAGCTCGACGACGTCTTCGCCGTTCCCGTCCGCAAGTTTGCCGCCTACCAGC TGACGGAAACGATTCCGTGGGTGATGAAGCGATACGTCCTCATGCAACGGCACGCCACCAGGCCGCCTCTGTACG AGTTTGAGACGGCGGCTAGCGAGACGGAGCCCCAGGCTTTCGCTACGAGCGCCTCCGAGGATAAGAAGGTGAAGA TGTGA |