Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02123
Gene name
Locationscaffold_02:2651287..2652724
Strand+
Gene length (bp)1437
Transcript length (bp)948
Coding sequence length (bp)948
Protein length (aa) 316

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01873 eIF-5_eIF-2B Domain found in IF2B/IF5 3.3E-41 183 292

GO

GO Term Description Terminal node
GO:0003743 translation initiation factor activity Yes
GO:0006413 translational initiation Yes
GO:0090079 translation regulator activity, nucleic acid binding No
GO:0008152 metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0045182 translation regulator activity No
GO:0008135 translation factor activity, RNA binding No
GO:0008150 biological_process No
GO:0003676 nucleic acid binding No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0005488 binding No
GO:0044237 cellular metabolic process No
GO:0097159 organic cyclic compound binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.5904 0.644 0.0159 0.0677 0.0473 0.0437 0.1308 0.1673 0.4705 0.0005

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup5428
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7945
Ophiocordyceps australis map64 (Brazil) OphauB2|4973
Ophiocordyceps camponoti-floridani Ophcf2|02123 (this protein)
Ophiocordyceps kimflemingae Ophio5|6052
Ophiocordyceps subramaniannii Hirsu2|5882

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02123
MDGQQTKSRKSVTFTDAQVVVDPDGSITMVDAVEDPKETAQSHSPLAPPDDGGLDLSLLKKKKKKKDKVDGADAA
ADADADADADAAALLADDGGLDLTMKKKKKKKTKDPAAGDDDFAAKLKQLEVKDTADESADVDFAEGDMNGTGIW
AHDETRAIPYKNLLQRFYVQMAEKNPDHALSGTKSYKIPPPQCMREGNRKTVFANIADICKRMKRTEEHVTAYLF
AELGTNGSVDGSRRLVIKGRFQQKQIENVVRKYIIEYVTCKTCKSPDTELSKGENRLYFITCNNCGSRRSVTAIK
TGFSAQVGKRRKMQG*
Coding >Ophcf2|02123
ATGGACGGCCAACAAACAAAAAGCCGCAAGTCGGTCACCTTTACAGACGCCCAGGTCGTCGTCGACCCCGACGGC
TCCATCACAATGGTCGACGCCGTCGAAGACCCCAAAGAGACTGCCCAGTCGCACTCGCCCCTCGCACCGCCCGAC
GACGGCGGCCTCGACCTGTCGCTGCTGAAGAAGAAGAAGAAGAAGAAGGACAAGGTCGATGGCGCCGACGCCGCC
GCTGATGCCGACGCCGACGCCGACGCCGACGCCGCCGCTCTCCTCGCCGACGATGGCGGTCTCGACCTGACGATG
AAGAAGAAGAAGAAGAAGAAGACCAAGGATCCCGCCGCCGGCGACGATGACTTCGCCGCCAAGCTCAAGCAGCTC
GAGGTAAAGGACACGGCCGACGAGTCCGCAGACGTCGACTTTGCCGAGGGCGACATGAACGGCACCGGCATCTGG
GCCCACGACGAGACCCGCGCCATCCCCTACAAGAACCTCCTCCAGCGCTTCTACGTGCAGATGGCTGAGAAGAAC
CCGGACCACGCCCTCAGCGGCACGAAGAGCTACAAGATCCCGCCCCCTCAGTGCATGCGCGAAGGGAACCGCAAA
ACCGTATTCGCCAACATCGCCGACATCTGCAAGCGCATGAAGCGGACCGAGGAGCACGTCACCGCCTACCTATTT
GCCGAACTCGGCACCAACGGCTCCGTCGACGGGAGCAGGAGGTTGGTAATCAAGGGTCGCTTCCAGCAGAAGCAG
ATTGAGAATGTCGTCCGCAAGTACATCATCGAATACGTCACGTGTAAAACGTGCAAGTCCCCCGACACGGAGCTA
AGCAAGGGCGAGAACCGTCTGTACTTCATCACCTGCAACAACTGCGGATCCCGACGTAGCGTCACCGCCATCAAG
ACGGGCTTCTCCGCCCAAGTCGGAAAGAGAAGAAAGATGCAAGGCTGA
Transcript >Ophcf2|02123
ATGGACGGCCAACAAACAAAAAGCCGCAAGTCGGTCACCTTTACAGACGCCCAGGTCGTCGTCGACCCCGACGGC
TCCATCACAATGGTCGACGCCGTCGAAGACCCCAAAGAGACTGCCCAGTCGCACTCGCCCCTCGCACCGCCCGAC
GACGGCGGCCTCGACCTGTCGCTGCTGAAGAAGAAGAAGAAGAAGAAGGACAAGGTCGATGGCGCCGACGCCGCC
GCTGATGCCGACGCCGACGCCGACGCCGACGCCGCCGCTCTCCTCGCCGACGATGGCGGTCTCGACCTGACGATG
AAGAAGAAGAAGAAGAAGAAGACCAAGGATCCCGCCGCCGGCGACGATGACTTCGCCGCCAAGCTCAAGCAGCTC
GAGGTAAAGGACACGGCCGACGAGTCCGCAGACGTCGACTTTGCCGAGGGCGACATGAACGGCACCGGCATCTGG
GCCCACGACGAGACCCGCGCCATCCCCTACAAGAACCTCCTCCAGCGCTTCTACGTGCAGATGGCTGAGAAGAAC
CCGGACCACGCCCTCAGCGGCACGAAGAGCTACAAGATCCCGCCCCCTCAGTGCATGCGCGAAGGGAACCGCAAA
ACCGTATTCGCCAACATCGCCGACATCTGCAAGCGCATGAAGCGGACCGAGGAGCACGTCACCGCCTACCTATTT
GCCGAACTCGGCACCAACGGCTCCGTCGACGGGAGCAGGAGGTTGGTAATCAAGGGTCGCTTCCAGCAGAAGCAG
ATTGAGAATGTCGTCCGCAAGTACATCATCGAATACGTCACGTGTAAAACGTGCAAGTCCCCCGACACGGAGCTA
AGCAAGGGCGAGAACCGTCTGTACTTCATCACCTGCAACAACTGCGGATCCCGACGTAGCGTCACCGCCATCAAG
ACGGGCTTCTCCGCCCAAGTCGGAAAGAGAAGAAAGATGCAAGGCTGA
Gene >Ophcf2|02123
ATGGACGGCCAACAAGTGAGTCACCCTGTTCGAAACCATCCATCCATCTATCCTCTCTTTTTCTTATCCTCGCTC
TTTGTCTTTCTCCTTCGCCTCCCTCTCCGTTACAGAGCCACAACTCCGATACATGCATATCAACCTACCTTAGTA
GCCGCCAAACCCCGCCAGTACCACGCCCTCGCTTTACCCTCCCTTTGCTACCCTCCTCCCATCCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTGCCCATTCTTCACTGCCATTCAACTCCTCATCAAACCACTGTCCGAGAC
ACACCCTTCCGTGCGCCCTTGTTCTGCCTCTCTTTGACCATGAAAAATCATTTACTGACGCCATCATTCCAAGAC
AAAAAGCCGCAAGTCGGTCACCTTTACAGACGCCCAGGTCGTCGTCGACCCCGACGGCTCCATCACAATGGTCGA
CGCCGTCGAAGACCCCAAAGAGACTGCCCAGTCGCACTCGCCCCGTACGCAGCCGCTCTCCGCTGCCCTCGAGGC
CTTTGCTGATGCCTCGGCTCAAGTCGCACCGCCCGACGACGGCGGCCTCGACCTGTCGCTGCTGAAGAAGAAGAA
GAAGAAGAAGGACAAGGTCGATGGCGCCGACGCCGCCGCTGATGCCGACGCCGACGCCGACGCCGACGCCGCCGC
TCTCCTCGCCGACGATGGCGGTCTCGACCTGACGATGAAGAAGAAGAAGAAGAAGAAGACCAAGGATCCCGCCGC
CGGCGACGATGACTTCGCCGCCAAGCTCAAGCAGCTCGAGGTAAAGGACACGGCCGACGAGTCCGCAGACGTCGA
CTTTGCCGAGGGCGACATGAACGGCACCGGCATCTGGGCCCACGACGAGACCCGCGCCATCCCCTACAAGAACCT
CCTCCAGCGCTTCTACGTGCAGATGGCTGAGAAGAACCCGGACCACGCCCTCAGCGGCACGAAGAGCTACAAGAT
CCCGCCCCCTCAGTGCATGCGCGAAGGGAACCGCAAAACCGTATTCGCCAACATCGCCGACATCTGCAAGCGCAT
GAAGCGGACCGAGGAGCACGTCACCGCCTACCTATTTGCCGAACTCGGCACCAACGGCTCCGTCGACGGGAGCAG
GAGGTTGGTAATCAAGGGTCGCTTCCAGCAGAAGCAGATTGAGAATGTCGTCCGCAAGTACATCAGTATGACTCT
CACCCCTTTTCTCTCTCCCCTCTCTTCGCAGTTGACGGCAGCTAACTTTTTTTTTTTTGCCTTCAAGTCGAATAC
GTCACGTGTAAAACGTGCAAGTCCCCCGACACGGAGCTAAGCAAGGGCGAGAACCGTCTGTACTTCATCACCTGC
AACAACTGCGGATCCCGACGTAGCGTCACCGCCATCAAGACGGGCTTCTCCGCCCAAGTCGGAAAGAGAAGAAAG
ATGCAAGGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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