Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02106
Gene name
Locationscaffold_02:2616805..2617275
Strand+
Gene length (bp)470
Transcript length (bp)399
Coding sequence length (bp)399
Protein length (aa) 133

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02656 DUF202 Domain of unknown function (DUF202) 2.1E-16 24 85

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.5

Transmembrane Domains

Domain # Start End Length
1 32 54 22
2 57 79 22
3 99 118 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02106
MSSQPLLQTAPGKRIALPTRVEPKVFFANERTFLSWLNFTVVLGALAVGMLNFGDHVAFISAFLFTGIAMLAMLY
ALVTYHWRAKSIRMRGQAGFDDRFGPTVLAVTLLLAVIVNFVLRINERSKKERHGGS*
Coding >Ophcf2|02106
ATGTCCTCCCAGCCGCTTCTGCAGACGGCGCCGGGAAAGCGCATCGCTTTGCCGACGCGGGTTGAGCCCAAGGTC
TTCTTCGCCAACGAGCGCACCTTTCTCTCATGGCTCAACTTTACCGTCGTCCTCGGCGCGCTGGCCGTCGGCATG
CTCAACTTTGGAGACCACGTCGCCTTCATCTCTGCCTTTCTCTTTACCGGCATCGCCATGCTGGCTATGCTCTAC
GCCCTCGTCACCTATCATTGGAGGGCAAAGTCGATACGCATGAGGGGTCAGGCGGGCTTTGACGACCGCTTCGGC
CCTACCGTGCTGGCCGTCACGCTTCTTCTGGCTGTCATCGTCAACTTTGTCCTTCGCATCAACGAGCGGTCGAAG
AAGGAACGTCATGGGGGCTCATAG
Transcript >Ophcf2|02106
ATGTCCTCCCAGCCGCTTCTGCAGACGGCGCCGGGAAAGCGCATCGCTTTGCCGACGCGGGTTGAGCCCAAGGTC
TTCTTCGCCAACGAGCGCACCTTTCTCTCATGGCTCAACTTTACCGTCGTCCTCGGCGCGCTGGCCGTCGGCATG
CTCAACTTTGGAGACCACGTCGCCTTCATCTCTGCCTTTCTCTTTACCGGCATCGCCATGCTGGCTATGCTCTAC
GCCCTCGTCACCTATCATTGGAGGGCAAAGTCGATACGCATGAGGGGTCAGGCGGGCTTTGACGACCGCTTCGGC
CCTACCGTGCTGGCCGTCACGCTTCTTCTGGCTGTCATCGTCAACTTTGTCCTTCGCATCAACGAGCGGTCGAAG
AAGGAACGTCATGGGGGCTCATAG
Gene >Ophcf2|02106
ATGTCCTCCCAGCCGCTTCTGCAGACGGCGCCGGGTATGAAGAACCTTTTCTGTTCCTTTTCTTGCCAAGACAAT
CATCATTGACTGCTCATGGCGGACTGATAGGAAAGCGCATCGCTTTGCCGACGCGGGTTGAGCCCAAGGTCTTCT
TCGCCAACGAGCGCACCTTTCTCTCATGGCTCAACTTTACCGTCGTCCTCGGCGCGCTGGCCGTCGGCATGCTCA
ACTTTGGAGACCACGTCGCCTTCATCTCTGCCTTTCTCTTTACCGGCATCGCCATGCTGGCTATGCTCTACGCCC
TCGTCACCTATCATTGGAGGGCAAAGTCGATACGCATGAGGGGTCAGGCGGGCTTTGACGACCGCTTCGGCCCTA
CCGTGCTGGCCGTCACGCTTCTTCTGGCTGTCATCGTCAACTTTGTCCTTCGCATCAACGAGCGGTCGAAGAAGG
AACGTCATGGGGGCTCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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