Protein ID | Ophcf2|02066 |
Gene name | |
Location | scaffold_02:2513817..2514947 |
Strand | - |
Gene length (bp) | 1130 |
Transcript length (bp) | 1005 |
Coding sequence length (bp) | 1005 |
Protein length (aa) | 335 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00107 | ADH_zinc_N | Zinc-binding dehydrogenase | 3.2E-25 | 156 | 282 |
PF13602 | ADH_zinc_N_2 | Zinc-binding dehydrogenase | 4.4E-22 | 190 | 330 |
PF08240 | ADH_N | Alcohol dehydrogenase GroES-like domain | 7.9E-08 | 31 | 91 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|02066 MMKAVDIRGGSGDRHALFLNPDFPKPTPTRGQALVRVRAFGINRMDILQRRGAYPVPAGASAVLGVEFSGVVEAL GDHHDNTTLKVGQHVLGLVYGGAYAEYVVVSYRMLIHKPSTLSWVQAAALPEAWITAIQALHRVLEFVPGRSILW HAGASGVSVAGIQLARRAGASRVFATAGSDEKCRFIVHRLGADAAFNYKTSDWAAAVREATDGQGVDYLVDFVGG GDYFNKNLDVCARDARIVMLGLLGGPKVPDANISQILAKRIRIEGSTLRSRDEDYQGWLRDKLETYLPDFEAGRL EVIIDKALPWEQVQDAHKHMEEAQNSGKIVCTIS* |
Coding | >Ophcf2|02066 ATGATGAAAGCAGTCGACATCCGAGGCGGCAGCGGTGACCGCCACGCCCTCTTCCTCAACCCCGACTTTCCGAAG CCCACCCCCACCCGGGGTCAAGCCCTCGTCCGGGTTCGAGCCTTCGGCATAAACCGCATGGACATTCTCCAGCGA CGAGGCGCGTATCCCGTCCCCGCGGGCGCCTCGGCCGTTCTGGGCGTCGAGTTCAGCGGCGTGGTCGAAGCCCTC GGCGATCATCATGATAACACCACCTTGAAAGTGGGCCAACATGTCCTTGGCCTCGTCTATGGAGGAGCCTATGCA GAGTACGTCGTCGTCAGCTACAGGATGCTCATTCATAAGCCCTCCACCTTGAGTTGGGTGCAGGCCGCCGCCTTG CCCGAAGCCTGGATCACGGCCATCCAGGCTCTGCACCGCGTGCTGGAGTTCGTGCCCGGCCGCTCCATTCTCTGG CATGCCGGCGCGTCTGGCGTCTCCGTTGCCGGCATCCAGCTCGCTCGCCGCGCTGGTGCCTCCCGCGTCTTCGCA ACCGCGGGCTCCGATGAAAAGTGTCGTTTCATCGTCCATCGCCTCGGCGCCGATGCCGCTTTCAACTACAAGACG TCTGACTGGGCTGCTGCCGTTCGCGAAGCCACCGACGGCCAGGGCGTCGATTACCTCGTCGACTTCGTTGGTGGA GGCGATTACTTCAATAAGAACCTCGACGTTTGCGCCAGGGATGCCCGCATTGTTATGCTCGGATTACTCGGCGGA CCAAAGGTCCCTGACGCCAATATCTCGCAGATCCTCGCCAAGCGCATTCGCATCGAGGGCAGCACCTTGCGCAGT CGTGACGAGGATTATCAGGGCTGGCTGCGCGACAAGCTCGAGACGTACCTGCCAGATTTTGAGGCCGGTCGCCTT GAGGTTATCATCGACAAGGCTCTGCCTTGGGAACAGGTACAGGATGCGCACAAGCACATGGAGGAGGCCCAGAAC TCGGGCAAGATTGTGTGCACCATTTCTTGA |
Transcript | >Ophcf2|02066 ATGATGAAAGCAGTCGACATCCGAGGCGGCAGCGGTGACCGCCACGCCCTCTTCCTCAACCCCGACTTTCCGAAG CCCACCCCCACCCGGGGTCAAGCCCTCGTCCGGGTTCGAGCCTTCGGCATAAACCGCATGGACATTCTCCAGCGA CGAGGCGCGTATCCCGTCCCCGCGGGCGCCTCGGCCGTTCTGGGCGTCGAGTTCAGCGGCGTGGTCGAAGCCCTC GGCGATCATCATGATAACACCACCTTGAAAGTGGGCCAACATGTCCTTGGCCTCGTCTATGGAGGAGCCTATGCA GAGTACGTCGTCGTCAGCTACAGGATGCTCATTCATAAGCCCTCCACCTTGAGTTGGGTGCAGGCCGCCGCCTTG CCCGAAGCCTGGATCACGGCCATCCAGGCTCTGCACCGCGTGCTGGAGTTCGTGCCCGGCCGCTCCATTCTCTGG CATGCCGGCGCGTCTGGCGTCTCCGTTGCCGGCATCCAGCTCGCTCGCCGCGCTGGTGCCTCCCGCGTCTTCGCA ACCGCGGGCTCCGATGAAAAGTGTCGTTTCATCGTCCATCGCCTCGGCGCCGATGCCGCTTTCAACTACAAGACG TCTGACTGGGCTGCTGCCGTTCGCGAAGCCACCGACGGCCAGGGCGTCGATTACCTCGTCGACTTCGTTGGTGGA GGCGATTACTTCAATAAGAACCTCGACGTTTGCGCCAGGGATGCCCGCATTGTTATGCTCGGATTACTCGGCGGA CCAAAGGTCCCTGACGCCAATATCTCGCAGATCCTCGCCAAGCGCATTCGCATCGAGGGCAGCACCTTGCGCAGT CGTGACGAGGATTATCAGGGCTGGCTGCGCGACAAGCTCGAGACGTACCTGCCAGATTTTGAGGCCGGTCGCCTT GAGGTTATCATCGACAAGGCTCTGCCTTGGGAACAGGTACAGGATGCGCACAAGCACATGGAGGAGGCCCAGAAC TCGGGCAAGATTGTGTGCACCATTTCTTGA |
Gene | >Ophcf2|02066 ATGATGAAAGCAGTCGGTAGTAATCCCCAGCAAACAAACATGCCTTTCATACATACACACATACGCAAATACCTT CCACCAACAACCAAGAAATCCCTCAACCACAACAATCCCGCAATGCCACTGACCGCCCCCGCGCAGACATCCGAG GCGGCAGCGGTGACCGCCACGCCCTCTTCCTCAACCCCGACTTTCCGAAGCCCACCCCCACCCGGGGTCAAGCCC TCGTCCGGGTTCGAGCCTTCGGCATAAACCGCATGGACATTCTCCAGCGACGAGGCGCGTATCCCGTCCCCGCGG GCGCCTCGGCCGTTCTGGGCGTCGAGTTCAGCGGCGTGGTCGAAGCCCTCGGCGATCATCATGATAACACCACCT TGAAAGTGGGCCAACATGTCCTTGGCCTCGTCTATGGAGGAGCCTATGCAGAGTACGTCGTCGTCAGCTACAGGA TGCTCATTCATAAGCCCTCCACCTTGAGTTGGGTGCAGGCCGCCGCCTTGCCCGAAGCCTGGATCACGGCCATCC AGGCTCTGCACCGCGTGCTGGAGTTCGTGCCCGGCCGCTCCATTCTCTGGCATGCCGGCGCGTCTGGCGTCTCCG TTGCCGGCATCCAGCTCGCTCGCCGCGCTGGTGCCTCCCGCGTCTTCGCAACCGCGGGCTCCGATGAAAAGTGTC GTTTCATCGTCCATCGCCTCGGCGCCGATGCCGCTTTCAACTACAAGACGTCTGACTGGGCTGCTGCCGTTCGCG AAGCCACCGACGGCCAGGGCGTCGATTACCTCGTCGACTTCGTTGGTGGAGGCGATTACTTCAATAAGAACCTCG ACGTTTGCGCCAGGGATGCCCGCATTGTTATGCTCGGATTACTCGGCGGACCAAAGGTCCCTGACGCCAATATCT CGCAGATCCTCGCCAAGCGCATTCGCATCGAGGGCAGCACCTTGCGCAGTCGTGACGAGGATTATCAGGGCTGGC TGCGCGACAAGCTCGAGACGTACCTGCCAGATTTTGAGGCCGGTCGCCTTGAGGTTATCATCGACAAGGCTCTGC CTTGGGAACAGGTACAGGATGCGCACAAGCACATGGAGGAGGCCCAGAACTCGGGCAAGATTGTGTGCACCATTT CTTGA |