© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophcf2|02059 |
| Gene name | |
| Location | scaffold_02:2499451..2502314 |
| Strand | + |
| Gene length (bp) | 2863 |
| Transcript length (bp) | 2757 |
| Coding sequence length (bp) | 2757 |
| Protein length (aa) | 919 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01644 | Chitin_synth_1 | Chitin synthase | 3.2E-68 | 225 | 393 |
| PF08407 | Chitin_synth_1N | Chitin synthase N-terminal | 1.3E-26 | 146 | 224 |
| PF03142 | Chitin_synth_2 | Chitin synthase | 5.8E-21 | 370 | 579 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006031 | chitin biosynthetic process | Yes |
| GO:0004100 | chitin synthase activity | Yes |
| GO:0016758 | hexosyltransferase activity | No |
| GO:1901071 | glucosamine-containing compound metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0016740 | transferase activity | No |
| GO:0009058 | biosynthetic process | No |
| GO:0006022 | aminoglycan metabolic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:1901566 | organonitrogen compound biosynthetic process | No |
| GO:0009059 | macromolecule biosynthetic process | No |
| GO:0003824 | catalytic activity | No |
| GO:1901073 | glucosamine-containing compound biosynthetic process | No |
| GO:0008375 | acetylglucosaminyltransferase activity | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:1901137 | carbohydrate derivative biosynthetic process | No |
| GO:0008194 | UDP-glycosyltransferase activity | No |
| GO:0006030 | chitin metabolic process | No |
| GO:0046349 | amino sugar biosynthetic process | No |
| GO:0006023 | aminoglycan biosynthetic process | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0006040 | amino sugar metabolic process | No |
| GO:0016757 | glycosyltransferase activity | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cell membrane | Signal peptide|Transmembrane domain | 0.1572 | 0.0641 | 0.0372 | 0.6677 | 0.1177 | 0.0049 | 0.552 | 0.3896 | 0.4932 | 0.0155 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 571 | 593 | 22 |
| 2 | 631 | 653 | 22 |
| 3 | 663 | 685 | 22 |
| 4 | 710 | 732 | 22 |
| 5 | 747 | 769 | 22 |
| 6 | 842 | 864 | 22 |
| 7 | 884 | 906 | 22 |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| GT2_Chitin_synth_1 | 3.9E-70 | 225 | 393 |
| GT2_Chitin_synth_2 | 2.8E-22 | 370 | 587 |
| Orthofinder run ID | 4 |
| Orthogroup | 1004 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|02059 MAYNGPGQGHAYGGGGHPMQDLPAGGNYHHMPTHEPDDDAGRYLLNDPPAVGFDNDRLGARTPPVRPVSAYSLTE SYAPGASQLPQQNTGGGGFGVNSYGQYPQAAGYDYDRPANNVHDEEESWMLRQQQPGGFSRAGTGLKRYHTRRVK LVQGSVLSIDYPVPSAIKNAVQPLYRDVEGGNEEFMKMRYTAATCDPNDFTLKNGYDLRPRMYNRHTELLIAITY YNEDKVLLSRTLHGVMQNIRDIVNLKKSTFWNKGGPAWQKIVVCLVFDGIEKADKNTLDVLATVGVYQDGVIKKD VDGKETVAHIFEYTSQLSVTPNQQLIRPKDDSPQNLPPVQFIFCLKQKNSKKINSHRWLFNAFGRILNPEVTILI DAGTKPGPRSLLALWEGFYNDKDLGGACGEIHAMLGKGGKKLLNPLVAVQNFEYKISNILDKPLESSFGYVSVLP GAFSAYRFRAIMGRPLEQYFHGDHTLSKILGKKGIDGMNIFKKNMFLAEDRILCFELVAKAGQKWHLTYIKAAKG ETDVPEGAPEFISQRRRWLNGSFAASLYSLMHFGRIYKSGHNIIRMFFFHIQLIYNFLNLVFSWFSLASYYLTTT VIMDLVGTPVVASDSASEHHGWPFGDTATPIVNALLKYLYLAFVILQFILALGNRPKGSKFTYIASFMLFGLIQG YILVLSGYLVARAFNTPLAKQISLASGGDFVRSFFIGSGAAGVILIALITIYGLYFIASFLYLDPWHMFHSFPSY MILMSTYINILMVYAFNNWHDVSWGTKGSDASDALPSANITKGEKNEAVVEEIEKEQEDIDSQFEQTVRRALAPF KEADEDEKKDVEDGYKSFRTGLVVSWLFSNILLVIVITSDNFNSFGIGKSASVRTANFFKFLLYATAVLSLIRFF GFLWYLGRTGIMCCFARR* |
| Coding | >Ophcf2|02059 ATGGCGTACAACGGCCCGGGCCAGGGCCATGCGTATGGCGGTGGAGGACACCCGATGCAGGACCTCCCCGCTGGC GGCAACTATCATCACATGCCTACCCATGAGCCAGACGACGATGCGGGCCGCTATCTGCTCAACGACCCGCCCGCC GTCGGCTTCGACAACGACCGGCTCGGAGCCCGAACGCCCCCCGTCCGGCCCGTTTCCGCCTATAGCCTCACGGAG TCGTACGCGCCGGGGGCCTCCCAGCTGCCCCAGCAAAACACCGGAGGCGGCGGCTTCGGCGTCAATTCTTACGGC CAGTACCCTCAGGCCGCCGGCTACGACTACGATCGCCCGGCAAACAACGTCCATGACGAAGAGGAGAGCTGGATG CTCCGTCAGCAGCAGCCCGGCGGCTTCAGCCGTGCTGGCACCGGCCTCAAGCGCTATCACACCAGGCGCGTCAAG CTTGTGCAAGGCTCCGTCCTGAGCATCGACTATCCCGTCCCCAGTGCCATCAAGAACGCCGTTCAGCCGCTGTAC CGCGATGTCGAGGGCGGCAACGAGGAGTTCATGAAGATGCGTTACACGGCCGCCACCTGCGACCCCAACGACTTC ACCCTCAAGAACGGTTACGATTTGCGGCCCCGCATGTATAACAGACATACCGAGCTGCTCATCGCCATCACCTAC TACAACGAGGACAAGGTCTTGCTCTCCCGTACCCTGCACGGCGTCATGCAAAATATCCGTGACATCGTCAACCTC AAAAAGTCGACCTTTTGGAACAAGGGCGGACCCGCGTGGCAAAAGATTGTCGTCTGTCTCGTCTTCGACGGCATC GAAAAGGCCGACAAGAACACGCTCGACGTGCTCGCCACCGTTGGCGTCTACCAGGACGGCGTCATCAAAAAGGAT GTCGACGGCAAGGAGACGGTCGCCCACATCTTCGAGTACACCAGCCAGCTGTCCGTGACGCCCAACCAGCAGCTC ATCCGCCCCAAGGACGATAGCCCGCAAAACCTGCCGCCCGTGCAGTTCATCTTCTGCCTCAAGCAGAAGAACAGC AAGAAGATCAACTCGCACCGCTGGCTCTTCAATGCCTTTGGCCGCATCCTCAACCCAGAGGTCACCATCCTCATC GATGCCGGCACCAAGCCCGGCCCCCGCTCGCTGCTGGCCCTATGGGAGGGCTTCTACAACGACAAGGACCTCGGC GGCGCCTGCGGCGAGATTCACGCCATGCTGGGCAAGGGCGGCAAGAAGCTGCTCAATCCGCTGGTGGCAGTGCAG AACTTTGAGTACAAAATCTCAAACATCCTCGACAAGCCGCTCGAGAGCTCGTTTGGCTACGTCAGCGTTCTGCCC GGTGCCTTCTCGGCGTACCGCTTCCGCGCAATCATGGGTCGGCCGTTGGAGCAGTACTTCCACGGCGACCACACG CTGTCCAAGATCCTGGGCAAGAAGGGCATCGACGGCATGAACATCTTCAAAAAGAACATGTTCCTCGCCGAGGAC CGCATCCTGTGCTTCGAGCTCGTCGCAAAGGCCGGCCAGAAGTGGCACCTGACGTACATCAAGGCGGCCAAGGGC GAGACGGATGTGCCCGAGGGCGCGCCCGAGTTCATCAGCCAGCGTCGGCGCTGGCTCAACGGCTCTTTTGCCGCC TCGCTCTATTCGCTCATGCACTTTGGTCGTATCTACAAGAGTGGCCACAACATCATCCGCATGTTCTTCTTCCAC ATTCAGCTCATCTACAACTTCCTCAACCTCGTCTTCTCATGGTTCTCGCTGGCGTCGTACTACCTGACGACGACG GTCATCATGGACCTGGTCGGCACCCCCGTCGTCGCCTCTGACTCGGCCTCTGAGCACCACGGTTGGCCCTTTGGC GACACGGCGACGCCCATCGTCAACGCGCTGCTCAAGTACCTTTACCTGGCCTTTGTCATCCTGCAGTTCATCCTG GCGCTCGGCAACCGACCCAAGGGCTCCAAGTTTACGTACATTGCGTCTTTCATGCTCTTCGGCCTCATCCAGGGC TACATTCTGGTGCTGTCGGGCTACTTGGTGGCGCGGGCCTTTAACACTCCCCTGGCCAAGCAAATCTCTCTCGCG TCGGGCGGCGACTTCGTCCGCAGTTTCTTCATCGGATCCGGGGCAGCGGGCGTGATCTTGATTGCACTCATCACG ATCTACGGGCTCTACTTTATCGCGTCCTTCTTGTACCTGGACCCCTGGCACATGTTCCACTCGTTCCCGTCCTAC ATGATCCTCATGTCGACGTACATCAACATCCTGATGGTCTATGCCTTCAACAACTGGCACGACGTCTCGTGGGGT ACGAAAGGCTCCGACGCATCGGACGCGCTGCCGTCGGCCAACATCACCAAGGGCGAGAAGAACGAGGCGGTGGTT GAGGAAATTGAGAAGGAGCAGGAGGACATCGACAGCCAGTTTGAGCAGACGGTGCGTCGTGCTCTGGCGCCCTTT AAGGAGGCGGACGAGGATGAGAAGAAGGACGTCGAGGATGGGTACAAGTCTTTCCGGACGGGCCTGGTCGTCTCC TGGCTCTTCTCCAACATTTTGCTCGTCATCGTTATTACCAGCGACAACTTTAATTCGTTTGGCATCGGAAAATCG GCATCGGTCCGCACGGCCAACTTTTTCAAGTTTCTGCTGTACGCCACGGCGGTGCTGTCGCTGATCCGCTTCTTC GGCTTCCTTTGGTACCTGGGTAGGACGGGCATCATGTGCTGCTTTGCGCGGAGATGA |
| Transcript | >Ophcf2|02059 ATGGCGTACAACGGCCCGGGCCAGGGCCATGCGTATGGCGGTGGAGGACACCCGATGCAGGACCTCCCCGCTGGC GGCAACTATCATCACATGCCTACCCATGAGCCAGACGACGATGCGGGCCGCTATCTGCTCAACGACCCGCCCGCC GTCGGCTTCGACAACGACCGGCTCGGAGCCCGAACGCCCCCCGTCCGGCCCGTTTCCGCCTATAGCCTCACGGAG TCGTACGCGCCGGGGGCCTCCCAGCTGCCCCAGCAAAACACCGGAGGCGGCGGCTTCGGCGTCAATTCTTACGGC CAGTACCCTCAGGCCGCCGGCTACGACTACGATCGCCCGGCAAACAACGTCCATGACGAAGAGGAGAGCTGGATG CTCCGTCAGCAGCAGCCCGGCGGCTTCAGCCGTGCTGGCACCGGCCTCAAGCGCTATCACACCAGGCGCGTCAAG CTTGTGCAAGGCTCCGTCCTGAGCATCGACTATCCCGTCCCCAGTGCCATCAAGAACGCCGTTCAGCCGCTGTAC CGCGATGTCGAGGGCGGCAACGAGGAGTTCATGAAGATGCGTTACACGGCCGCCACCTGCGACCCCAACGACTTC ACCCTCAAGAACGGTTACGATTTGCGGCCCCGCATGTATAACAGACATACCGAGCTGCTCATCGCCATCACCTAC TACAACGAGGACAAGGTCTTGCTCTCCCGTACCCTGCACGGCGTCATGCAAAATATCCGTGACATCGTCAACCTC AAAAAGTCGACCTTTTGGAACAAGGGCGGACCCGCGTGGCAAAAGATTGTCGTCTGTCTCGTCTTCGACGGCATC GAAAAGGCCGACAAGAACACGCTCGACGTGCTCGCCACCGTTGGCGTCTACCAGGACGGCGTCATCAAAAAGGAT GTCGACGGCAAGGAGACGGTCGCCCACATCTTCGAGTACACCAGCCAGCTGTCCGTGACGCCCAACCAGCAGCTC ATCCGCCCCAAGGACGATAGCCCGCAAAACCTGCCGCCCGTGCAGTTCATCTTCTGCCTCAAGCAGAAGAACAGC AAGAAGATCAACTCGCACCGCTGGCTCTTCAATGCCTTTGGCCGCATCCTCAACCCAGAGGTCACCATCCTCATC GATGCCGGCACCAAGCCCGGCCCCCGCTCGCTGCTGGCCCTATGGGAGGGCTTCTACAACGACAAGGACCTCGGC GGCGCCTGCGGCGAGATTCACGCCATGCTGGGCAAGGGCGGCAAGAAGCTGCTCAATCCGCTGGTGGCAGTGCAG AACTTTGAGTACAAAATCTCAAACATCCTCGACAAGCCGCTCGAGAGCTCGTTTGGCTACGTCAGCGTTCTGCCC GGTGCCTTCTCGGCGTACCGCTTCCGCGCAATCATGGGTCGGCCGTTGGAGCAGTACTTCCACGGCGACCACACG CTGTCCAAGATCCTGGGCAAGAAGGGCATCGACGGCATGAACATCTTCAAAAAGAACATGTTCCTCGCCGAGGAC CGCATCCTGTGCTTCGAGCTCGTCGCAAAGGCCGGCCAGAAGTGGCACCTGACGTACATCAAGGCGGCCAAGGGC GAGACGGATGTGCCCGAGGGCGCGCCCGAGTTCATCAGCCAGCGTCGGCGCTGGCTCAACGGCTCTTTTGCCGCC TCGCTCTATTCGCTCATGCACTTTGGTCGTATCTACAAGAGTGGCCACAACATCATCCGCATGTTCTTCTTCCAC ATTCAGCTCATCTACAACTTCCTCAACCTCGTCTTCTCATGGTTCTCGCTGGCGTCGTACTACCTGACGACGACG GTCATCATGGACCTGGTCGGCACCCCCGTCGTCGCCTCTGACTCGGCCTCTGAGCACCACGGTTGGCCCTTTGGC GACACGGCGACGCCCATCGTCAACGCGCTGCTCAAGTACCTTTACCTGGCCTTTGTCATCCTGCAGTTCATCCTG GCGCTCGGCAACCGACCCAAGGGCTCCAAGTTTACGTACATTGCGTCTTTCATGCTCTTCGGCCTCATCCAGGGC TACATTCTGGTGCTGTCGGGCTACTTGGTGGCGCGGGCCTTTAACACTCCCCTGGCCAAGCAAATCTCTCTCGCG TCGGGCGGCGACTTCGTCCGCAGTTTCTTCATCGGATCCGGGGCAGCGGGCGTGATCTTGATTGCACTCATCACG ATCTACGGGCTCTACTTTATCGCGTCCTTCTTGTACCTGGACCCCTGGCACATGTTCCACTCGTTCCCGTCCTAC ATGATCCTCATGTCGACGTACATCAACATCCTGATGGTCTATGCCTTCAACAACTGGCACGACGTCTCGTGGGGT ACGAAAGGCTCCGACGCATCGGACGCGCTGCCGTCGGCCAACATCACCAAGGGCGAGAAGAACGAGGCGGTGGTT GAGGAAATTGAGAAGGAGCAGGAGGACATCGACAGCCAGTTTGAGCAGACGGTGCGTCGTGCTCTGGCGCCCTTT AAGGAGGCGGACGAGGATGAGAAGAAGGACGTCGAGGATGGGTACAAGTCTTTCCGGACGGGCCTGGTCGTCTCC TGGCTCTTCTCCAACATTTTGCTCGTCATCGTTATTACCAGCGACAACTTTAATTCGTTTGGCATCGGAAAATCG GCATCGGTCCGCACGGCCAACTTTTTCAAGTTTCTGCTGTACGCCACGGCGGTGCTGTCGCTGATCCGCTTCTTC GGCTTCCTTTGGTACCTGGGTAGGACGGGCATCATGTGCTGCTTTGCGCGGAGATGA |
| Gene | >Ophcf2|02059 ATGGCGTACAACGGCCCGGGCCAGGGCCATGCGTATGGCGGTGGAGGACACCCGATGCAGGACCTCCCCGCTGGC GGCAACGTGAGTCCCGAAACGCGTCTCGAGGACAATGTGTTGACATGACGGCAGTATCATCACATGCCTACCCAT GAGCCAGACGACGATGCGGGCCGCTATCTGCTCAACGACCCGCCCGCCGTCGGCTTCGACAACGACCGGCTCGGA GCCCGAACGCCCCCCGTCCGGCCCGTTTCCGCCTATAGCCTCACGGAGTCGTACGCGCCGGGGGCCTCCCAGCTG CCCCAGCAAAACACCGGAGGCGGCGGCTTCGGCGTCAATTCTTACGGCCAGTACCCTCAGGCCGCCGGCTACGAC TACGATCGCCCGGCAAACAACGTCCATGACGAAGAGGAGAGCTGGATGCTCCGTCAGCAGCAGCCCGGCGGCTTC AGCCGTGCTGGCACCGGCCTCAAGCGCTATCACACCAGGCGCGTCAAGCTTGTGCAAGGCTCCGTCCTGAGCATC GACTATCCCGTCCCCAGTGCCATCAAGAACGCCGTTCAGCCGCTGTACCGCGATGTCGAGGGCGGCAACGAGGAG TTCATGAAGATGCGTTACACGGCCGCCACCTGCGACCCCAACGACTTCACCCTCAAGAACGGTTACGATTTGCGG CCCCGCATGTATAACAGACATACCGAGCTGCTCATCGCCATCACCTACTACAACGAGGACAAGGTCTTGCTCTCC CGTACCCTGCACGGCGTCATGCAAAATATCCGTGACATCGTCAACCTCAAAAAGTCGACCTTTTGGAACAAGGGC GGACCCGCGTGGCAAAAGATTGTCGTCTGTCTCGTCTTCGACGGCATCGAAAAGGCCGACAAGAACACGCTCGAC GTGCTCGCCACCGTTGGCGTCTACCAGGACGGCGTCATCAAAAAGGATGTCGACGGCAAGGAGACGGTCGCCCAC ATCTTCGAGTACACCAGCCAGCTGTCCGTGACGCCCAACCAGCAGCTCATCCGCCCCAAGGACGATAGCCCGCAA AACCTGCCGCCCGTGCAGTTCATCTTCTGCCTCAAGCAGAAGAACAGCAAGAAGATCAACTCGCACCGCTGGCTC TTCAATGCCTTTGGCCGCATCCTCAACCCAGAGGTCACCATCCTCATCGATGCCGGCACCAAGCCCGGCCCCCGC TCGCTGCTGGCCCTATGGGAGGGCTTCTACAACGACAAGGACCTCGGCGGCGCCTGCGGCGAGATTCACGCCATG CTGGGCAAGGGCGGCAAGAAGCTGCTCAATCCGCTGGTGGCAGTGCAGAACTTTGAGTACAAAATCTCAAACATC CTCGACAAGCCGCTCGAGAGCTCGTTTGGCTACGTCAGCGTTCTGCCCGGTGCCTTCTCGGCGTACCGCTTCCGC GCAATCATGGGTCGGCCGTTGGAGCAGTACTTCCACGGCGACCACACGCTGTCCAAGATCCTGGGCAAGAAGGGC ATCGACGGCATGAACATCTTCAAAAAGAACATGTTCCTCGCCGAGGACCGCATCCTGTGCTTCGAGCTCGTCGCA AAGGCCGGCCAGAAGTGGCACCTGACGTACATCAAGGCGGCCAAGGGCGAGACGGATGTGCCCGAGGGCGCGCCC GAGTTCATCAGCCAGCGTCGGCGCTGGCTCAACGGCTCTTTTGCCGCCTCGCTCTATTCGCTCATGCACTTTGGT CGTATCTACAAGAGTGGCCACAACATCATCCGCATGTTCTTCTTCCACATTCAGCTCATCTACAACTTCCTCAAC CTCGTCTTCTCATGGTTCTCGCTGGCGTCGTACTACCTGACGACGACGGTCATCATGGACCTGGTCGGCACCCCC GTCGTCGCCTCTGACTCGGCCTCTGAGCACCACGGTTGGCCCTTTGGCGACACGGCGACGCCCATCGTCAACGCG CTGCTCAAGTACCTTTACCTGGCCTTTGTCATCCTGCAGTTCATCCTGGCGCTCGGCAACCGACCCAAGGGCTCC AAGTTTACGTACATTGCGTCTTTCATGCTCTTCGGCCTCATCCAGGGCTACATTCTGGTGCTGTCGGGCTACTTG GTGGCGCGGGCCTTTAACACTCCCCTGGCCAAGCAAATCTCTCTCGCGTCGGGCGGCGACTTCGTCCGCAGTTTC TTCATCGGATCCGGGGCAGCGGGCGTGATCTTGATTGCACTCATCACGATCTACGGGCTCTACTTTATCGCGTCC TTCTTGTACCTGGACCCCTGGCACATGTTCCACTCGTTCCCGTCCTACATGATCCTCATGTCGACGTACATCAAC ATCCTGATGGTCTATGCCTTCAACAACTGGCACGACGTCTCGTGGGGTACGAAAGGCTCCGACGCATCGGACGCG CTGCCGTCGGCCAACATCACCAAGGGCGAGAAGAACGAGGCGGTGGTTGAGGAAATTGAGAAGGAGCAGGAGGAC ATCGACAGCCAGTTTGAGCAGACGGTGCGTCGTGCTCTGGCGCCCTTTAAGGAGGCGGACGAGGATGAGAAGAAG GACGTCGAGGATGGGTACAAGTCTTTCCGGACGGGCCTGGTCGTCTCCTGGCTCTTCTCCAACATTTTGCTCGTC ATCGTTATTACCAGCGACAACTTTAATTCGTTTGGCATCGGAGTGAGTCTTGCGTCCGTCCCCGGCTATAACAAG AGATCGACTAAAGAGTGGTGTACAGAAATCGGCATCGGTCCGCACGGCCAACTTTTTCAAGTTTCTGCTGTACGC CACGGCGGTGCTGTCGCTGATCCGCTTCTTCGGCTTCCTTTGGTACCTGGGTAGGACGGGCATCATGTGCTGCTT TGCGCGGAGATGA |