Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02041
Gene name
Locationscaffold_02:2454509..2456313
Strand+
Gene length (bp)1804
Transcript length (bp)1500
Coding sequence length (bp)1500
Protein length (aa) 500

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06398 Pex24p Integral peroxisomal membrane peroxin 4.6E-87 91 485

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

Domain # Start End Length
1 145 167 22
2 253 275 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02041
MDVRYRAQTTSQTGTIVPHHHVSRSQPHSTMDDDDDAQQPPSEPSGLSAMRERSGLQDRLVNKLLQQVIPSDGDS
QSPDSKAGSSPFPQRPGFNLTTMSYNFRHFNARIGVVFRFQAKAERLLSWRRPTQTLSMLAVYSFVCLDPHLLPV
LPLVVLLLGVLVPAFVARHPAPPKGTLSSEQAVGYSPHGPPLAPPAPTVRPPAKELSRDFFRNMRDLQNSMADFS
HAHDRIVKLVVPVTDFSDEALSSTVFHILVVAALVMALAAHIVPWRLVFFVGGWSLVLARHPSIKPLVRGQFRRP
TPPKHLDDNPQRRDHDSLSLLDRWTASDVILDSAPETREAEIFELQRADPDAAAWEPWLFSPEPYDPLSPSRIAG
HRPRGSRFFEDVLPPPGWHWSEKKWALDLWSREWVEDRIITGVEVETEGERWVYDMFDDRQGRIGVVDYSQPPKP
PRKHADASAQPSWEEGDDEEGGGRRGEWRRRRWVRLVKRRAVLPSAATA*
Coding >Ophcf2|02041
ATGGATGTCCGGTATAGGGCGCAAACAACAAGCCAGACGGGAACTATAGTTCCCCATCACCACGTCTCTCGCTCT
CAACCGCACAGCACCATGGACGACGACGACGATGCCCAGCAACCTCCGTCAGAACCCTCTGGCCTCTCTGCCATG
CGTGAGAGGTCCGGACTGCAGGATCGACTGGTTAACAAATTGCTCCAGCAGGTAATTCCTTCCGACGGCGACAGC
CAATCGCCCGACTCGAAAGCCGGCTCCTCTCCCTTTCCGCAACGGCCGGGCTTCAACCTGACGACCATGTCGTAC
AACTTCCGGCACTTCAACGCCCGCATCGGCGTCGTCTTCCGCTTCCAAGCCAAGGCCGAACGACTACTCTCGTGG
CGGCGTCCCACGCAGACGCTGTCGATGCTAGCCGTATACTCCTTCGTCTGCCTCGACCCTCACCTCCTGCCCGTG
CTACCACTGGTAGTCCTCCTCCTCGGCGTCCTGGTCCCGGCCTTTGTGGCCCGGCATCCCGCGCCTCCAAAGGGC
ACGCTCTCGAGCGAGCAGGCTGTCGGATACTCGCCTCATGGCCCGCCTCTTGCGCCGCCCGCGCCGACGGTCCGA
CCGCCGGCCAAGGAGCTGAGCCGCGACTTCTTCCGCAATATGCGCGATCTACAGAACAGCATGGCCGACTTCTCT
CACGCCCACGATCGCATCGTCAAGCTCGTCGTGCCCGTCACAGATTTCAGTGACGAGGCTCTCTCCTCGACCGTC
TTCCACATACTCGTCGTCGCCGCCCTCGTCATGGCGCTGGCCGCCCACATCGTCCCCTGGCGCCTCGTCTTCTTC
GTCGGCGGCTGGTCCCTCGTCCTCGCCCGCCATCCTAGCATCAAGCCTCTCGTCCGCGGCCAGTTCCGCAGGCCG
ACCCCTCCGAAACACCTCGACGACAACCCCCAACGACGAGACCACGACTCCCTCTCGCTGCTCGACCGCTGGACC
GCCTCTGACGTCATCCTCGACTCTGCGCCCGAGACGCGCGAGGCTGAAATCTTTGAGCTCCAGCGTGCCGACCCG
GACGCAGCCGCCTGGGAGCCCTGGCTCTTCTCGCCGGAGCCCTACGATCCGCTCTCGCCCTCGCGCATCGCCGGC
CACCGCCCACGAGGATCCCGCTTCTTCGAGGACGTCCTGCCTCCGCCAGGCTGGCACTGGAGCGAGAAGAAGTGG
GCTCTCGACCTCTGGAGCCGAGAGTGGGTCGAGGACCGCATCATCACCGGCGTCGAGGTAGAGACCGAGGGCGAG
CGCTGGGTGTACGACATGTTCGACGACCGTCAGGGCCGTATCGGAGTCGTCGACTACTCTCAGCCACCCAAACCC
CCCCGGAAGCATGCCGATGCCTCGGCACAACCCAGCTGGGAGGAGGGCGATGACGAAGAGGGCGGCGGCAGGAGA
GGCGAGTGGCGGAGGAGGAGATGGGTGAGGCTGGTCAAGAGACGAGCCGTCCTCCCATCGGCAGCCACGGCCTGA
Transcript >Ophcf2|02041
ATGGATGTCCGGTATAGGGCGCAAACAACAAGCCAGACGGGAACTATAGTTCCCCATCACCACGTCTCTCGCTCT
CAACCGCACAGCACCATGGACGACGACGACGATGCCCAGCAACCTCCGTCAGAACCCTCTGGCCTCTCTGCCATG
CGTGAGAGGTCCGGACTGCAGGATCGACTGGTTAACAAATTGCTCCAGCAGGTAATTCCTTCCGACGGCGACAGC
CAATCGCCCGACTCGAAAGCCGGCTCCTCTCCCTTTCCGCAACGGCCGGGCTTCAACCTGACGACCATGTCGTAC
AACTTCCGGCACTTCAACGCCCGCATCGGCGTCGTCTTCCGCTTCCAAGCCAAGGCCGAACGACTACTCTCGTGG
CGGCGTCCCACGCAGACGCTGTCGATGCTAGCCGTATACTCCTTCGTCTGCCTCGACCCTCACCTCCTGCCCGTG
CTACCACTGGTAGTCCTCCTCCTCGGCGTCCTGGTCCCGGCCTTTGTGGCCCGGCATCCCGCGCCTCCAAAGGGC
ACGCTCTCGAGCGAGCAGGCTGTCGGATACTCGCCTCATGGCCCGCCTCTTGCGCCGCCCGCGCCGACGGTCCGA
CCGCCGGCCAAGGAGCTGAGCCGCGACTTCTTCCGCAATATGCGCGATCTACAGAACAGCATGGCCGACTTCTCT
CACGCCCACGATCGCATCGTCAAGCTCGTCGTGCCCGTCACAGATTTCAGTGACGAGGCTCTCTCCTCGACCGTC
TTCCACATACTCGTCGTCGCCGCCCTCGTCATGGCGCTGGCCGCCCACATCGTCCCCTGGCGCCTCGTCTTCTTC
GTCGGCGGCTGGTCCCTCGTCCTCGCCCGCCATCCTAGCATCAAGCCTCTCGTCCGCGGCCAGTTCCGCAGGCCG
ACCCCTCCGAAACACCTCGACGACAACCCCCAACGACGAGACCACGACTCCCTCTCGCTGCTCGACCGCTGGACC
GCCTCTGACGTCATCCTCGACTCTGCGCCCGAGACGCGCGAGGCTGAAATCTTTGAGCTCCAGCGTGCCGACCCG
GACGCAGCCGCCTGGGAGCCCTGGCTCTTCTCGCCGGAGCCCTACGATCCGCTCTCGCCCTCGCGCATCGCCGGC
CACCGCCCACGAGGATCCCGCTTCTTCGAGGACGTCCTGCCTCCGCCAGGCTGGCACTGGAGCGAGAAGAAGTGG
GCTCTCGACCTCTGGAGCCGAGAGTGGGTCGAGGACCGCATCATCACCGGCGTCGAGGTAGAGACCGAGGGCGAG
CGCTGGGTGTACGACATGTTCGACGACCGTCAGGGCCGTATCGGAGTCGTCGACTACTCTCAGCCACCCAAACCC
CCCCGGAAGCATGCCGATGCCTCGGCACAACCCAGCTGGGAGGAGGGCGATGACGAAGAGGGCGGCGGCAGGAGA
GGCGAGTGGCGGAGGAGGAGATGGGTGAGGCTGGTCAAGAGACGAGCCGTCCTCCCATCGGCAGCCACGGCCTGA
Gene >Ophcf2|02041
ATGGATGTCCGGTATAGGGTAGGTGCCTTTCCCCTAATTCCCCCAAGACATCAACCCGTCCCCTGCTATGAGGAA
ACACCCGCGGATGCATCGAGCCTCGGCCCGCAGCAAACCACCCCAATCTGAGTGGCAACGGACAAGGCGCAAACA
ACAAGCCAGACGGGAACTATGTATGTCACGAGACGCCACCACCTTGTTCATCACGTGCGTCGCGGCTCAACCCCC
AACCGCCAGAGTTCCCCATCACCACGTCTCTCGCTCTCAACCGCACAGCACCATGGACGACGACGACGATGCCCA
GCAACCTCCGTCAGAACCCTCTGGCCTCTCTGCCATGCGTGAGAGGTCCGGACTGCAGGATCGACTGGTTAACAA
GTGCGCACGGGTCCCTCTCCCCGGAAACACGCTCCCCCCATCTCGATAACCCAATCCATCATCGTCGAAAAAGAC
AGTCAACTAACCAGATTCCCACTCCCTTACCTACCTATCTAGATTGCTCCAGCAGGTAATTCCTTCCGACGGCGA
CAGCCAATCGCCCGACTCGAAAGCCGGCTCCTCTCCCTTTCCGCAACGGCCGGGCTTCAACCTGACGACCATGTC
GTACAACTTCCGGCACTTCAACGCCCGCATCGGCGTCGTCTTCCGCTTCCAAGCCAAGGCCGAACGACTACTCTC
GTGGCGGCGTCCCACGCAGACGCTGTCGATGCTAGCCGTATACTCCTTCGTCTGCCTCGACCCTCACCTCCTGCC
CGTGCTACCACTGGTAGTCCTCCTCCTCGGCGTCCTGGTCCCGGCCTTTGTGGCCCGGCATCCCGCGCCTCCAAA
GGGCACGCTCTCGAGCGAGCAGGCTGTCGGATACTCGCCTCATGGCCCGCCTCTTGCGCCGCCCGCGCCGACGGT
CCGACCGCCGGCCAAGGAGCTGAGCCGCGACTTCTTCCGCAATATGCGCGATCTACAGAACAGCATGGCCGACTT
CTCTCACGCCCACGATCGCATCGTCAAGCTCGTCGTGCCCGTCACAGATTTCAGTGACGAGGCTCTCTCCTCGAC
CGTCTTCCACATACTCGTCGTCGCCGCCCTCGTCATGGCGCTGGCCGCCCACATCGTCCCCTGGCGCCTCGTCTT
CTTCGTCGGCGGCTGGTCCCTCGTCCTCGCCCGCCATCCTAGCATCAAGCCTCTCGTCCGCGGCCAGTTCCGCAG
GCCGACCCCTCCGAAACACCTCGACGACAACCCCCAACGACGAGACCACGACTCCCTCTCGCTGCTCGACCGCTG
GACCGCCTCTGACGTCATCCTCGACTCTGCGCCCGAGACGCGCGAGGCTGAAATCTTTGAGCTCCAGCGTGCCGA
CCCGGACGCAGCCGCCTGGGAGCCCTGGCTCTTCTCGCCGGAGCCCTACGATCCGCTCTCGCCCTCGCGCATCGC
CGGCCACCGCCCACGAGGATCCCGCTTCTTCGAGGACGTCCTGCCTCCGCCAGGCTGGCACTGGAGCGAGAAGAA
GTGGGCTCTCGACCTCTGGAGCCGAGAGTGGGTCGAGGACCGCATCATCACCGGCGTCGAGGTAGAGACCGAGGG
CGAGCGCTGGGTGTACGACATGTTCGACGACCGTCAGGGCCGTATCGGAGTCGTCGACTACTCTCAGCCACCCAA
ACCCCCCCGGAAGCATGCCGATGCCTCGGCACAACCCAGCTGGGAGGAGGGCGATGACGAAGAGGGCGGCGGCAG
GAGAGGCGAGTGGCGGAGGAGGAGATGGGTGAGGCTGGTCAAGAGACGAGCCGTCCTCCCATCGGCAGCCACGGC
CTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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