Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02023
Gene name
Locationscaffold_02:2395960..2398735
Strand+
Gene length (bp)2775
Transcript length (bp)2775
Coding sequence length (bp)2775
Protein length (aa) 925

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06424 PRP1_N PRP1 splicing factor, N-terminal 2.3E-49 12 170
PF13428 TPR_14 Tetratricopeptide repeat 2.4E-05 593 632
PF14559 TPR_19 Tetratricopeptide repeat 8.8E-06 604 662
PF13432 TPR_16 Tetratricopeptide repeat 1.5E-07 672 726
PF13181 TPR_8 Tetratricopeptide repeat 2.7E-03 694 720

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0000398 mRNA splicing, via spliceosome Yes
GO:0006725 cellular aromatic compound metabolic process No
GO:0006397 mRNA processing No
GO:0044237 cellular metabolic process No
GO:0006396 RNA processing No
GO:0009987 cellular process No
GO:0008152 metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0000375 RNA splicing, via transesterification reactions No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0005488 binding No
GO:0043170 macromolecule metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0016070 RNA metabolic process No
GO:0003674 molecular_function No
GO:0008380 RNA splicing No
GO:0090304 nucleic acid metabolic process No
GO:0016071 mRNA metabolic process No
GO:0008150 biological_process No
GO:0034641 cellular nitrogen compound metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02023
MTTRRDFLSQPAPENYVAGLGRGATGFTTRSDLGPARDGPSEDQIKEALAKRAAQLGIAPDGKDKKKGKDDAEAD
DDDGRFQDPDNEVGLFAGGVYDKEDEEADRIWEWVDERMDRRKRQREERENAERSEYERNNPKIQQQFTDLKRAL
STVTDDEWANLPEVGDLTGKNRRSKQALRQRFYAVPDSVLAAARDSTEMSTTVADEAGGDGTMTNFAEIGAARDK
VLKSRLEQASQSSVTGGEGGSSTSIDPQGYITSLNKMQSGAQAQVGDVNRVRELLQSVVKTNPNNALGWIAAARL
EELAGKTVAARKTIDKGCAQCPKSEDAWLENIRFNSESANAKVIARRALESNPHSVRLWVEAMKLETLTSNKKRV
VRQALDHVPESEALWKEAVNLEEDAKDAKLLLAKATDLIPLSVDLWLALARLETPDKAQKVLNRARKAVPTSHEI
WIAAARLQEQLGQGHKVNVMKRAVQVLAKEMAMPSREDWIVEAEKCEEDGAPVTCEAIVRETLSWGLEEDNERKD
IWMEEAKASINRGRYETARAIYAHVLRHFSGSRTAWMAAADLERTHGTRESLWALLDKAVEKCSNSSELWMTLAR
EKWQAGEVDGARLVLKRAFQHNPNNEDIWLSAVKLESDNGDEAQARHLLAVARDQAPTDRVWLKAVVFERVMGQT
EAALDLVLQALDRFPSAPKLWMLKGQIYEDLGRDDAAREAYAAGVKAVPGSVPLWLLHARLEERTGKLVKARSIL
DRARLAAPLSPDIWCESVRLERRAGNMAQARNLMARAQKAVSRSGLLWVEQIWHLEPRTQRKQRSLEAIKKADND
AILFVTVARIFWADRRLDKAQNWFEKALVLDPDCGDSWAWYHRFLCQHGTHEKRAELVAKCVQNEPRHGEVWASV
AKRPRNAEKTVAEKLELVAAELED*
Coding >Ophcf2|02023
ATGACGACTCGACGCGATTTCCTGAGCCAGCCGGCGCCGGAAAACTACGTGGCCGGTCTTGGTCGGGGCGCGACC
GGCTTCACGACTCGATCAGATCTGGGTCCAGCCCGTGATGGCCCCAGCGAGGATCAGATCAAAGAGGCTCTCGCC
AAACGAGCGGCTCAGCTGGGCATCGCGCCGGACGGAAAGGATAAGAAAAAGGGCAAGGATGACGCCGAGGCGGAT
GACGATGACGGCCGGTTTCAAGACCCGGATAACGAGGTGGGCCTCTTCGCCGGCGGCGTCTACGACAAGGAAGAC
GAGGAGGCGGATCGTATCTGGGAATGGGTCGATGAGCGAATGGACCGGCGGAAGCGGCAGCGGGAGGAGCGCGAA
AACGCCGAGCGGAGCGAGTACGAGCGTAACAATCCCAAGATCCAGCAGCAGTTTACCGACCTCAAGCGAGCCCTT
TCGACCGTCACCGATGATGAGTGGGCCAACCTCCCCGAAGTCGGCGACCTGACGGGCAAGAATCGGCGTAGCAAG
CAGGCGCTTCGACAACGCTTCTACGCCGTGCCCGACAGCGTGCTGGCCGCCGCCCGCGACTCGACGGAGATGAGT
ACGACGGTGGCCGACGAGGCCGGCGGTGACGGCACCATGACCAACTTCGCCGAGATCGGGGCCGCGCGCGACAAG
GTGCTCAAGTCGAGGCTGGAACAGGCGTCGCAGTCGTCGGTGACGGGGGGCGAAGGCGGCAGCTCGACCAGCATC
GATCCGCAGGGATACATCACCAGCCTCAACAAGATGCAGAGCGGGGCGCAGGCGCAAGTGGGCGACGTCAACCGC
GTGCGGGAGCTGCTGCAGTCGGTTGTCAAGACGAACCCCAACAATGCCCTCGGCTGGATCGCGGCCGCTCGCCTC
GAGGAGTTGGCGGGCAAGACGGTGGCAGCGCGCAAGACGATTGATAAGGGCTGCGCTCAGTGTCCCAAGAGCGAG
GACGCCTGGCTCGAGAATATCCGGTTCAATAGCGAGTCGGCCAATGCAAAAGTCATCGCGCGGCGCGCCCTCGAA
TCCAACCCGCATTCGGTCCGGCTATGGGTCGAGGCCATGAAGCTGGAGACGCTGACGAGCAACAAGAAGAGGGTG
GTGCGTCAGGCCCTCGACCACGTGCCCGAGTCGGAGGCGCTGTGGAAGGAGGCTGTCAACCTGGAGGAGGACGCC
AAGGACGCGAAGCTGCTGCTGGCCAAGGCGACGGATCTGATACCGCTGTCGGTCGACCTGTGGCTGGCGCTGGCC
CGGCTGGAGACGCCTGACAAGGCGCAAAAGGTGCTGAACCGGGCGCGCAAGGCCGTGCCGACGTCGCACGAGATC
TGGATCGCGGCGGCGCGGCTACAGGAGCAGCTGGGTCAGGGCCACAAGGTCAACGTGATGAAGAGGGCGGTGCAG
GTGTTGGCCAAGGAAATGGCCATGCCGTCGCGCGAGGATTGGATCGTCGAGGCGGAGAAATGCGAGGAGGATGGG
GCGCCGGTGACGTGCGAGGCCATCGTGCGCGAGACACTGAGCTGGGGGCTGGAGGAGGACAACGAGCGCAAGGAC
ATATGGATGGAGGAGGCCAAGGCCAGCATCAACAGGGGCAGATACGAGACGGCGAGGGCCATCTACGCCCACGTG
CTGCGTCATTTCTCAGGCAGCCGGACGGCCTGGATGGCGGCCGCGGACCTGGAGCGGACGCACGGCACGCGCGAG
TCGCTGTGGGCGCTGCTGGACAAGGCGGTGGAGAAGTGCAGCAACAGCTCGGAGCTGTGGATGACGCTGGCCCGC
GAGAAGTGGCAGGCCGGCGAGGTCGACGGCGCCCGGCTGGTGCTCAAGAGGGCATTCCAGCACAACCCCAACAAC
GAGGATATCTGGCTGTCGGCCGTCAAGCTCGAGTCGGACAACGGCGATGAAGCCCAGGCGCGTCACCTGCTGGCC
GTGGCCCGGGACCAGGCGCCGACGGACCGCGTCTGGCTCAAGGCCGTCGTCTTCGAGCGCGTCATGGGCCAGACG
GAGGCGGCGCTGGATCTGGTGCTGCAGGCCCTCGATCGATTCCCCTCTGCGCCGAAGCTGTGGATGCTCAAGGGT
CAGATATACGAGGACCTGGGCCGTGACGACGCGGCGCGCGAGGCCTACGCTGCCGGCGTCAAGGCCGTTCCCGGC
TCCGTTCCCCTCTGGCTGCTCCACGCCCGGCTCGAGGAGCGGACGGGCAAGCTGGTCAAGGCGAGGTCCATCCTC
GACCGCGCCCGGCTCGCGGCCCCGCTCAGCCCGGACATCTGGTGCGAGTCGGTCCGGCTCGAGCGGCGGGCGGGC
AACATGGCCCAGGCGAGGAACCTGATGGCGCGCGCTCAGAAGGCCGTGTCCCGGAGCGGCCTCTTATGGGTCGAG
CAGATCTGGCACCTCGAGCCGCGGACGCAGCGGAAGCAGCGAAGTCTCGAGGCCATCAAGAAGGCAGACAACGAC
GCCATCCTCTTCGTCACCGTCGCCCGCATCTTCTGGGCTGACCGCCGGCTTGACAAGGCTCAGAACTGGTTCGAG
AAGGCGCTCGTCCTCGATCCGGACTGCGGCGATAGCTGGGCTTGGTATCATCGTTTCCTGTGTCAGCATGGGACG
CACGAGAAGCGCGCCGAGCTGGTGGCCAAGTGTGTGCAGAACGAGCCTCGCCACGGGGAGGTGTGGGCTTCGGTG
GCCAAGAGACCGCGGAATGCTGAAAAGACGGTTGCCGAGAAGTTGGAGTTGGTGGCTGCCGAGCTCGAGGATTGA
Transcript >Ophcf2|02023
ATGACGACTCGACGCGATTTCCTGAGCCAGCCGGCGCCGGAAAACTACGTGGCCGGTCTTGGTCGGGGCGCGACC
GGCTTCACGACTCGATCAGATCTGGGTCCAGCCCGTGATGGCCCCAGCGAGGATCAGATCAAAGAGGCTCTCGCC
AAACGAGCGGCTCAGCTGGGCATCGCGCCGGACGGAAAGGATAAGAAAAAGGGCAAGGATGACGCCGAGGCGGAT
GACGATGACGGCCGGTTTCAAGACCCGGATAACGAGGTGGGCCTCTTCGCCGGCGGCGTCTACGACAAGGAAGAC
GAGGAGGCGGATCGTATCTGGGAATGGGTCGATGAGCGAATGGACCGGCGGAAGCGGCAGCGGGAGGAGCGCGAA
AACGCCGAGCGGAGCGAGTACGAGCGTAACAATCCCAAGATCCAGCAGCAGTTTACCGACCTCAAGCGAGCCCTT
TCGACCGTCACCGATGATGAGTGGGCCAACCTCCCCGAAGTCGGCGACCTGACGGGCAAGAATCGGCGTAGCAAG
CAGGCGCTTCGACAACGCTTCTACGCCGTGCCCGACAGCGTGCTGGCCGCCGCCCGCGACTCGACGGAGATGAGT
ACGACGGTGGCCGACGAGGCCGGCGGTGACGGCACCATGACCAACTTCGCCGAGATCGGGGCCGCGCGCGACAAG
GTGCTCAAGTCGAGGCTGGAACAGGCGTCGCAGTCGTCGGTGACGGGGGGCGAAGGCGGCAGCTCGACCAGCATC
GATCCGCAGGGATACATCACCAGCCTCAACAAGATGCAGAGCGGGGCGCAGGCGCAAGTGGGCGACGTCAACCGC
GTGCGGGAGCTGCTGCAGTCGGTTGTCAAGACGAACCCCAACAATGCCCTCGGCTGGATCGCGGCCGCTCGCCTC
GAGGAGTTGGCGGGCAAGACGGTGGCAGCGCGCAAGACGATTGATAAGGGCTGCGCTCAGTGTCCCAAGAGCGAG
GACGCCTGGCTCGAGAATATCCGGTTCAATAGCGAGTCGGCCAATGCAAAAGTCATCGCGCGGCGCGCCCTCGAA
TCCAACCCGCATTCGGTCCGGCTATGGGTCGAGGCCATGAAGCTGGAGACGCTGACGAGCAACAAGAAGAGGGTG
GTGCGTCAGGCCCTCGACCACGTGCCCGAGTCGGAGGCGCTGTGGAAGGAGGCTGTCAACCTGGAGGAGGACGCC
AAGGACGCGAAGCTGCTGCTGGCCAAGGCGACGGATCTGATACCGCTGTCGGTCGACCTGTGGCTGGCGCTGGCC
CGGCTGGAGACGCCTGACAAGGCGCAAAAGGTGCTGAACCGGGCGCGCAAGGCCGTGCCGACGTCGCACGAGATC
TGGATCGCGGCGGCGCGGCTACAGGAGCAGCTGGGTCAGGGCCACAAGGTCAACGTGATGAAGAGGGCGGTGCAG
GTGTTGGCCAAGGAAATGGCCATGCCGTCGCGCGAGGATTGGATCGTCGAGGCGGAGAAATGCGAGGAGGATGGG
GCGCCGGTGACGTGCGAGGCCATCGTGCGCGAGACACTGAGCTGGGGGCTGGAGGAGGACAACGAGCGCAAGGAC
ATATGGATGGAGGAGGCCAAGGCCAGCATCAACAGGGGCAGATACGAGACGGCGAGGGCCATCTACGCCCACGTG
CTGCGTCATTTCTCAGGCAGCCGGACGGCCTGGATGGCGGCCGCGGACCTGGAGCGGACGCACGGCACGCGCGAG
TCGCTGTGGGCGCTGCTGGACAAGGCGGTGGAGAAGTGCAGCAACAGCTCGGAGCTGTGGATGACGCTGGCCCGC
GAGAAGTGGCAGGCCGGCGAGGTCGACGGCGCCCGGCTGGTGCTCAAGAGGGCATTCCAGCACAACCCCAACAAC
GAGGATATCTGGCTGTCGGCCGTCAAGCTCGAGTCGGACAACGGCGATGAAGCCCAGGCGCGTCACCTGCTGGCC
GTGGCCCGGGACCAGGCGCCGACGGACCGCGTCTGGCTCAAGGCCGTCGTCTTCGAGCGCGTCATGGGCCAGACG
GAGGCGGCGCTGGATCTGGTGCTGCAGGCCCTCGATCGATTCCCCTCTGCGCCGAAGCTGTGGATGCTCAAGGGT
CAGATATACGAGGACCTGGGCCGTGACGACGCGGCGCGCGAGGCCTACGCTGCCGGCGTCAAGGCCGTTCCCGGC
TCCGTTCCCCTCTGGCTGCTCCACGCCCGGCTCGAGGAGCGGACGGGCAAGCTGGTCAAGGCGAGGTCCATCCTC
GACCGCGCCCGGCTCGCGGCCCCGCTCAGCCCGGACATCTGGTGCGAGTCGGTCCGGCTCGAGCGGCGGGCGGGC
AACATGGCCCAGGCGAGGAACCTGATGGCGCGCGCTCAGAAGGCCGTGTCCCGGAGCGGCCTCTTATGGGTCGAG
CAGATCTGGCACCTCGAGCCGCGGACGCAGCGGAAGCAGCGAAGTCTCGAGGCCATCAAGAAGGCAGACAACGAC
GCCATCCTCTTCGTCACCGTCGCCCGCATCTTCTGGGCTGACCGCCGGCTTGACAAGGCTCAGAACTGGTTCGAG
AAGGCGCTCGTCCTCGATCCGGACTGCGGCGATAGCTGGGCTTGGTATCATCGTTTCCTGTGTCAGCATGGGACG
CACGAGAAGCGCGCCGAGCTGGTGGCCAAGTGTGTGCAGAACGAGCCTCGCCACGGGGAGGTGTGGGCTTCGGTG
GCCAAGAGACCGCGGAATGCTGAAAAGACGGTTGCCGAGAAGTTGGAGTTGGTGGCTGCCGAGCTCGAGGATTGA
Gene >Ophcf2|02023
ATGACGACTCGACGCGATTTCCTGAGCCAGCCGGCGCCGGAAAACTACGTGGCCGGTCTTGGTCGGGGCGCGACC
GGCTTCACGACTCGATCAGATCTGGGTCCAGCCCGTGATGGCCCCAGCGAGGATCAGATCAAAGAGGCTCTCGCC
AAACGAGCGGCTCAGCTGGGCATCGCGCCGGACGGAAAGGATAAGAAAAAGGGCAAGGATGACGCCGAGGCGGAT
GACGATGACGGCCGGTTTCAAGACCCGGATAACGAGGTGGGCCTCTTCGCCGGCGGCGTCTACGACAAGGAAGAC
GAGGAGGCGGATCGTATCTGGGAATGGGTCGATGAGCGAATGGACCGGCGGAAGCGGCAGCGGGAGGAGCGCGAA
AACGCCGAGCGGAGCGAGTACGAGCGTAACAATCCCAAGATCCAGCAGCAGTTTACCGACCTCAAGCGAGCCCTT
TCGACCGTCACCGATGATGAGTGGGCCAACCTCCCCGAAGTCGGCGACCTGACGGGCAAGAATCGGCGTAGCAAG
CAGGCGCTTCGACAACGCTTCTACGCCGTGCCCGACAGCGTGCTGGCCGCCGCCCGCGACTCGACGGAGATGAGT
ACGACGGTGGCCGACGAGGCCGGCGGTGACGGCACCATGACCAACTTCGCCGAGATCGGGGCCGCGCGCGACAAG
GTGCTCAAGTCGAGGCTGGAACAGGCGTCGCAGTCGTCGGTGACGGGGGGCGAAGGCGGCAGCTCGACCAGCATC
GATCCGCAGGGATACATCACCAGCCTCAACAAGATGCAGAGCGGGGCGCAGGCGCAAGTGGGCGACGTCAACCGC
GTGCGGGAGCTGCTGCAGTCGGTTGTCAAGACGAACCCCAACAATGCCCTCGGCTGGATCGCGGCCGCTCGCCTC
GAGGAGTTGGCGGGCAAGACGGTGGCAGCGCGCAAGACGATTGATAAGGGCTGCGCTCAGTGTCCCAAGAGCGAG
GACGCCTGGCTCGAGAATATCCGGTTCAATAGCGAGTCGGCCAATGCAAAAGTCATCGCGCGGCGCGCCCTCGAA
TCCAACCCGCATTCGGTCCGGCTATGGGTCGAGGCCATGAAGCTGGAGACGCTGACGAGCAACAAGAAGAGGGTG
GTGCGTCAGGCCCTCGACCACGTGCCCGAGTCGGAGGCGCTGTGGAAGGAGGCTGTCAACCTGGAGGAGGACGCC
AAGGACGCGAAGCTGCTGCTGGCCAAGGCGACGGATCTGATACCGCTGTCGGTCGACCTGTGGCTGGCGCTGGCC
CGGCTGGAGACGCCTGACAAGGCGCAAAAGGTGCTGAACCGGGCGCGCAAGGCCGTGCCGACGTCGCACGAGATC
TGGATCGCGGCGGCGCGGCTACAGGAGCAGCTGGGTCAGGGCCACAAGGTCAACGTGATGAAGAGGGCGGTGCAG
GTGTTGGCCAAGGAAATGGCCATGCCGTCGCGCGAGGATTGGATCGTCGAGGCGGAGAAATGCGAGGAGGATGGG
GCGCCGGTGACGTGCGAGGCCATCGTGCGCGAGACACTGAGCTGGGGGCTGGAGGAGGACAACGAGCGCAAGGAC
ATATGGATGGAGGAGGCCAAGGCCAGCATCAACAGGGGCAGATACGAGACGGCGAGGGCCATCTACGCCCACGTG
CTGCGTCATTTCTCAGGCAGCCGGACGGCCTGGATGGCGGCCGCGGACCTGGAGCGGACGCACGGCACGCGCGAG
TCGCTGTGGGCGCTGCTGGACAAGGCGGTGGAGAAGTGCAGCAACAGCTCGGAGCTGTGGATGACGCTGGCCCGC
GAGAAGTGGCAGGCCGGCGAGGTCGACGGCGCCCGGCTGGTGCTCAAGAGGGCATTCCAGCACAACCCCAACAAC
GAGGATATCTGGCTGTCGGCCGTCAAGCTCGAGTCGGACAACGGCGATGAAGCCCAGGCGCGTCACCTGCTGGCC
GTGGCCCGGGACCAGGCGCCGACGGACCGCGTCTGGCTCAAGGCCGTCGTCTTCGAGCGCGTCATGGGCCAGACG
GAGGCGGCGCTGGATCTGGTGCTGCAGGCCCTCGATCGATTCCCCTCTGCGCCGAAGCTGTGGATGCTCAAGGGT
CAGATATACGAGGACCTGGGCCGTGACGACGCGGCGCGCGAGGCCTACGCTGCCGGCGTCAAGGCCGTTCCCGGC
TCCGTTCCCCTCTGGCTGCTCCACGCCCGGCTCGAGGAGCGGACGGGCAAGCTGGTCAAGGCGAGGTCCATCCTC
GACCGCGCCCGGCTCGCGGCCCCGCTCAGCCCGGACATCTGGTGCGAGTCGGTCCGGCTCGAGCGGCGGGCGGGC
AACATGGCCCAGGCGAGGAACCTGATGGCGCGCGCTCAGAAGGCCGTGTCCCGGAGCGGCCTCTTATGGGTCGAG
CAGATCTGGCACCTCGAGCCGCGGACGCAGCGGAAGCAGCGAAGTCTCGAGGCCATCAAGAAGGCAGACAACGAC
GCCATCCTCTTCGTCACCGTCGCCCGCATCTTCTGGGCTGACCGCCGGCTTGACAAGGCTCAGAACTGGTTCGAG
AAGGCGCTCGTCCTCGATCCGGACTGCGGCGATAGCTGGGCTTGGTATCATCGTTTCCTGTGTCAGCATGGGACG
CACGAGAAGCGCGCCGAGCTGGTGGCCAAGTGTGTGCAGAACGAGCCTCGCCACGGGGAGGTGTGGGCTTCGGTG
GCCAAGAGACCGCGGAATGCTGAAAAGACGGTTGCCGAGAAGTTGGAGTTGGTGGCTGCCGAGCTCGAGGATTGA

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